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[GitHub] [spark] attilapiros opened a new pull request #31363: [WIP][SPARK-34154][YARN] Fix flaky test in LocalityPlacementStrategySuite
attilapiros opened a new pull request #31363:
URL: https://github.com/apache/spark/pull/31363
PLEASE DO NOT MERGE THIS!
Try to reproduce the issue by running it 50 times and getting the stack trace for the thread which fails to stop.
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[GitHub] [spark] HyukjinKwon closed pull request #31363: [SPARK-34154][YARN] Extend LocalityPlacementStrategySuite's test with a timeout
Posted by GitBox <gi...@apache.org>.
HyukjinKwon closed pull request #31363:
URL: https://github.com/apache/spark/pull/31363
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[GitHub] [spark] HyukjinKwon commented on pull request #31363: [SPARK-34154][YARN] Extend LocalityPlacementStrategySuite's test with a timeout
Posted by GitBox <gi...@apache.org>.
HyukjinKwon commented on pull request #31363:
URL: https://github.com/apache/spark/pull/31363#issuecomment-768636101
Let's merge and monitor the builds. The changes look making sense.
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[GitHub] [spark] HyukjinKwon commented on pull request #31363: [SPARK-34154][YARN] Extend LocalityPlacementStrategySuite's test with a timeout
Posted by GitBox <gi...@apache.org>.
HyukjinKwon commented on pull request #31363:
URL: https://github.com/apache/spark/pull/31363#issuecomment-768636190
Merged to master, branch-3.1 and branch-3.0.
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[GitHub] [spark] SparkQA commented on pull request #31363: [SPARK-34154][YARN] Extend LocalityPlacementStrategySuite's test with a timeout
Posted by GitBox <gi...@apache.org>.
SparkQA commented on pull request #31363:
URL: https://github.com/apache/spark/pull/31363#issuecomment-768611983
**[Test build #134570 has finished](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/134570/testReport)** for PR 31363 at commit [`b965b8a`](https://github.com/apache/spark/commit/b965b8ad379f161e0e089ed7ee7aaeefbaafe641).
* This patch passes all tests.
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* This patch adds no public classes.
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[GitHub] [spark] SparkQA commented on pull request #31363: [WIP][SPARK-34154][YARN] Fix flaky test in LocalityPlacementStrategySuite
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URL: https://github.com/apache/spark/pull/31363#issuecomment-768352788
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[GitHub] [spark] attilapiros commented on pull request #31363: [SPARK-34154][YARN] Extend LocalityPlacementStrategySuite's test with a timeout
Posted by GitBox <gi...@apache.org>.
attilapiros commented on pull request #31363:
URL: https://github.com/apache/spark/pull/31363#issuecomment-768581351
Unrelated error:
```
[info] KafkaSourceStressSuite:
[info] - stress test with multiple topics and partitions *** FAILED *** (37 seconds, 259 milliseconds)
[info] == Results ==
[info] !== Correct Answer - 106 == == Spark Answer - 101 ==
[info] struct<value:int> struct<value:int>
...
```
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[GitHub] [spark] HyukjinKwon commented on pull request #31363: [SPARK-34154][YARN] Extend LocalityPlacementStrategySuite's test with a timeout
Posted by GitBox <gi...@apache.org>.
HyukjinKwon commented on pull request #31363:
URL: https://github.com/apache/spark/pull/31363#issuecomment-769590677
Thanks @attilapiros.
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URL: https://github.com/apache/spark/pull/31363#issuecomment-768536603
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[GitHub] [spark] HyukjinKwon commented on pull request #31363: [SPARK-34154][YARN] Extend LocalityPlacementStrategySuite's test with a timeout
Posted by GitBox <gi...@apache.org>.
HyukjinKwon commented on pull request #31363:
URL: https://github.com/apache/spark/pull/31363#issuecomment-768635234
Oh, nice. Thanks @attilapiros!
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[GitHub] [spark] SparkQA commented on pull request #31363: [WIP][SPARK-34154][YARN] Fix flaky test in LocalityPlacementStrategySuite
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URL: https://github.com/apache/spark/pull/31363#issuecomment-768348150
**[Test build #134554 has finished](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/134554/testReport)** for PR 31363 at commit [`c6ca806`](https://github.com/apache/spark/commit/c6ca806673cfcc84f6cf416fc127edde5f1bf018).
* This patch passes all tests.
* This patch merges cleanly.
* This patch adds no public classes.
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Posted by GitBox <gi...@apache.org>.
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[GitHub] [spark] attilapiros commented on pull request #31363: [SPARK-34154][YARN] Extend LocalityPlacementStrategySuite's test with a timeout
Posted by GitBox <gi...@apache.org>.
attilapiros commented on pull request #31363:
URL: https://github.com/apache/spark/pull/31363#issuecomment-769579261
This was expected.
The goal was to avoid endless wait for the test to finish and get more info about the problem via a stack trace.
And we have the stack trace:
```
[info] - handle large number of containers and tasks (SPARK-18750) *** FAILED *** (30 seconds, 4 milliseconds)
[info] Failed with an exception or a timeout at thread join:
[info]
[info] java.lang.RuntimeException: Timeout at waiting for thread to stop (its stack trace is added to the exception)
[info] at java.net.Inet6AddressImpl.lookupAllHostAddr(Native Method)
[info] at java.net.InetAddress$2.lookupAllHostAddr(InetAddress.java:929)
[info] at java.net.InetAddress.getAddressesFromNameService(InetAddress.java:1324)
[info] at java.net.InetAddress.getAllByName0(InetAddress.java:1277)
[info] at java.net.InetAddress.getAllByName(InetAddress.java:1193)
[info] at java.net.InetAddress.getAllByName(InetAddress.java:1127)
[info] at java.net.InetAddress.getByName(InetAddress.java:1077)
[info] at org.apache.hadoop.net.NetUtils.normalizeHostName(NetUtils.java:568)
[info] at org.apache.hadoop.net.NetUtils.normalizeHostNames(NetUtils.java:585)
[info] at org.apache.hadoop.net.CachedDNSToSwitchMapping.resolve(CachedDNSToSwitchMapping.java:109)
[info] at org.apache.spark.deploy.yarn.SparkRackResolver.coreResolve(SparkRackResolver.scala:75)
[info] at org.apache.spark.deploy.yarn.SparkRackResolver.resolve(SparkRackResolver.scala:66)
[info] at org.apache.spark.deploy.yarn.LocalityPreferredContainerPlacementStrategy.$anonfun$localityOfRequestedContainers$3(LocalityPreferredContainerPlacementStrategy.scala:142)
[info] at org.apache.spark.deploy.yarn.LocalityPreferredContainerPlacementStrategy$$Lambda$658/1080992036.apply$mcVI$sp(Unknown Source)
[info] at scala.collection.immutable.Range.foreach$mVc$sp(Range.scala:158)
[info] at org.apache.spark.deploy.yarn.LocalityPreferredContainerPlacementStrategy.localityOfRequestedContainers(LocalityPreferredContainerPlacementStrategy.scala:138)
[info] at org.apache.spark.deploy.yarn.LocalityPlacementStrategySuite.org$apache$spark$deploy$yarn$LocalityPlacementStrategySuite$$runTest(LocalityPlacementStrategySuite.scala:94)
[info] at org.apache.spark.deploy.yarn.LocalityPlacementStrategySuite$$anon$1.run(LocalityPlacementStrategySuite.scala:40)
[info] at java.lang.Thread.run(Thread.java:748) (LocalityPlacementStrategySuite.scala:61)
```
I already suspected this must be related to DNS resolution see my [jira comment](https://issues.apache.org/jira/browse/SPARK-34154?focusedCommentId=17272990&page=com.atlassian.jira.plugin.system.issuetabpanels%3Acomment-tabpanel#comment-17272990).
I am checking the possible solutions.
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[GitHub] [spark] SparkQA commented on pull request #31363: [WIP][SPARK-34154][YARN] Fix flaky test in LocalityPlacementStrategySuite
Posted by GitBox <gi...@apache.org>.
SparkQA commented on pull request #31363:
URL: https://github.com/apache/spark/pull/31363#issuecomment-768427808
**[Test build #134559 has finished](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/134559/testReport)** for PR 31363 at commit [`2c51957`](https://github.com/apache/spark/commit/2c519576862a43c990b9d8196f27b536f9f493a2).
* This patch passes all tests.
* This patch merges cleanly.
* This patch adds no public classes.
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[GitHub] [spark] attilapiros commented on pull request #31363: [WIP][SPARK-34154][YARN] Fix flaky test in LocalityPlacementStrategySuite
Posted by GitBox <gi...@apache.org>.
attilapiros commented on pull request #31363:
URL: https://github.com/apache/spark/pull/31363#issuecomment-768315179
Well, I had no luck here. All of them successful:
```
[info] LocalityPlacementStrategySuite:
[info] - handle large number of containers and tasks (SPARK-18750) 1 (5 seconds, 422 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 2 (341 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 3 (297 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 4 (293 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 5 (279 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 6 (283 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 7 (278 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 8 (283 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 9 (278 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 10 (270 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 11 (283 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 12 (274 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 13 (272 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 14 (286 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 15 (270 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 16 (282 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 17 (274 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 18 (698 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 19 (1 second, 192 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 20 (951 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 21 (2 seconds, 353 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 22 (327 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 23 (273 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 24 (277 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 25 (274 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 26 (277 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 27 (278 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 28 (278 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 29 (281 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 30 (279 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 31 (277 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 32 (275 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 33 (276 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 34 (278 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 35 (276 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 36 (278 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 37 (277 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 38 (278 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 39 (275 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 40 (581 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 41 (1 second, 303 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 42 (3 seconds, 642 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 43 (276 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 44 (277 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 45 (289 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 46 (278 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 47 (275 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 48 (274 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 49 (283 milliseconds)
[info] - handle large number of containers and tasks (SPARK-18750) 50 (279 milliseconds)
```
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jenkins retest this please
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* This patch passes all tests.
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* This patch adds no public classes.
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dongjoon-hyun commented on pull request #31363:
URL: https://github.com/apache/spark/pull/31363#issuecomment-769435311
Unfortunately, this is still flaky in master branch.
- https://github.com/apache/spark/runs/1787277785
```
[info] *** 1 TEST FAILED ***
[error] Failed: Total 137, Failed 1, Errors 0, Passed 136, Canceled 1
[error] Failed tests:
[error] org.apache.spark.deploy.yarn.LocalityPlacementStrategySuite
[error] (yarn / Test / test) sbt.TestsFailedException: Tests unsuccessful
[error] Total time: 567 s (09:27), completed Jan 28, 2021 10:08:42 PM
```
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[GitHub] [spark] attilapiros edited a comment on pull request #31363: [SPARK-34154][YARN] Extend LocalityPlacementStrategySuite's test with a timeout
Posted by GitBox <gi...@apache.org>.
attilapiros edited a comment on pull request #31363:
URL: https://github.com/apache/spark/pull/31363#issuecomment-769579261
This was expected.
The goal was to avoid endless wait for the test to finish and get more info about the problem via a stack trace.
And we have the stack trace:
```
[info] - handle large number of containers and tasks (SPARK-18750) *** FAILED *** (30 seconds, 4 milliseconds)
[info] Failed with an exception or a timeout at thread join:
[info]
[info] java.lang.RuntimeException: Timeout at waiting for thread to stop (its stack trace is added to the exception)
[info] at java.net.Inet6AddressImpl.lookupAllHostAddr(Native Method)
[info] at java.net.InetAddress$2.lookupAllHostAddr(InetAddress.java:929)
[info] at java.net.InetAddress.getAddressesFromNameService(InetAddress.java:1324)
[info] at java.net.InetAddress.getAllByName0(InetAddress.java:1277)
[info] at java.net.InetAddress.getAllByName(InetAddress.java:1193)
[info] at java.net.InetAddress.getAllByName(InetAddress.java:1127)
[info] at java.net.InetAddress.getByName(InetAddress.java:1077)
[info] at org.apache.hadoop.net.NetUtils.normalizeHostName(NetUtils.java:568)
[info] at org.apache.hadoop.net.NetUtils.normalizeHostNames(NetUtils.java:585)
[info] at org.apache.hadoop.net.CachedDNSToSwitchMapping.resolve(CachedDNSToSwitchMapping.java:109)
[info] at org.apache.spark.deploy.yarn.SparkRackResolver.coreResolve(SparkRackResolver.scala:75)
[info] at org.apache.spark.deploy.yarn.SparkRackResolver.resolve(SparkRackResolver.scala:66)
[info] at org.apache.spark.deploy.yarn.LocalityPreferredContainerPlacementStrategy.$anonfun$localityOfRequestedContainers$3(LocalityPreferredContainerPlacementStrategy.scala:142)
[info] at org.apache.spark.deploy.yarn.LocalityPreferredContainerPlacementStrategy$$Lambda$658/1080992036.apply$mcVI$sp(Unknown Source)
[info] at scala.collection.immutable.Range.foreach$mVc$sp(Range.scala:158)
[info] at org.apache.spark.deploy.yarn.LocalityPreferredContainerPlacementStrategy.localityOfRequestedContainers(LocalityPreferredContainerPlacementStrategy.scala:138)
[info] at org.apache.spark.deploy.yarn.LocalityPlacementStrategySuite.org$apache$spark$deploy$yarn$LocalityPlacementStrategySuite$$runTest(LocalityPlacementStrategySuite.scala:94)
[info] at org.apache.spark.deploy.yarn.LocalityPlacementStrategySuite$$anon$1.run(LocalityPlacementStrategySuite.scala:40)
[info] at java.lang.Thread.run(Thread.java:748) (LocalityPlacementStrategySuite.scala:61)
```
I already suspected this must be related to DNS resolution see my [jira comment](https://issues.apache.org/jira/browse/SPARK-34154?focusedCommentId=17272990&page=com.atlassian.jira.plugin.system.issuetabpanels%3Acomment-tabpanel#comment-17272990).
Now I am checking the possible solutions.
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[GitHub] [spark] attilapiros commented on a change in pull request #31363: [WIP][SPARK-34154][YARN] Fix flaky test in LocalityPlacementStrategySuite
Posted by GitBox <gi...@apache.org>.
attilapiros commented on a change in pull request #31363:
URL: https://github.com/apache/spark/pull/31363#discussion_r565516665
##########
File path: resource-managers/yarn/src/test/scala/org/apache/spark/deploy/yarn/LocalityPlacementStrategySuite.scala
##########
@@ -33,7 +33,7 @@ class LocalityPlacementStrategySuite extends SparkFunSuite {
test("handle large number of containers and tasks (SPARK-18750)") {
// Run the test in a thread with a small stack size, since the original issue
// surfaced as a StackOverflowError.
- var error: Throwable = null
+ @volatile var error: Throwable = null
Review comment:
As this is set from another thread so this must be either volatile or the access synchronized.
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@dongjoon-hyun you are welcome.
The code is ready for review / merge.
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