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Posted to commits@taverna.apache.org by st...@apache.org on 2016/05/15 15:34:56 UTC

[1/2] incubator-taverna-language git commit: Make JSON valid

Repository: incubator-taverna-language
Updated Branches:
  refs/heads/master c5359d7af -> 95ebd5826


Make JSON valid


Project: http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/repo
Commit: http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/commit/8e18be4a
Tree: http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/tree/8e18be4a
Diff: http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/diff/8e18be4a

Branch: refs/heads/master
Commit: 8e18be4ae95cfefa9416761ee0f4a024392c07ba
Parents: c5359d7
Author: Stian Soiland-Reyes <st...@apache.org>
Authored: Sun May 15 16:10:26 2016 +0100
Committer: Stian Soiland-Reyes <st...@apache.org>
Committed: Sun May 15 16:10:26 2016 +0100

----------------------------------------------------------------------
 taverna-robundle/src/main/resources/contexts/bundle.jsonld | 1 -
 1 file changed, 1 deletion(-)
----------------------------------------------------------------------


http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/blob/8e18be4a/taverna-robundle/src/main/resources/contexts/bundle.jsonld
----------------------------------------------------------------------
diff --git a/taverna-robundle/src/main/resources/contexts/bundle.jsonld b/taverna-robundle/src/main/resources/contexts/bundle.jsonld
index 9ab7bb6..cadb9ff 100644
--- a/taverna-robundle/src/main/resources/contexts/bundle.jsonld
+++ b/taverna-robundle/src/main/resources/contexts/bundle.jsonld
@@ -137,5 +137,4 @@
 
   },
   "http://purl.org/pav/retrievedFrom": { "@id": "https://raw.githubusercontent.com/wf4ever/ro/61b563e7e9941485ff6e7b338875d4015d734b6f/bundle/draft/context.json" } 
-  }
 }


[2/2] incubator-taverna-language git commit: TAVERNA-970 Use Jena 3.1.0

Posted by st...@apache.org.
TAVERNA-970 Use Jena 3.1.0

.. but we need explicit xerces and to upgrade jsonld java version


Project: http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/repo
Commit: http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/commit/95ebd582
Tree: http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/tree/95ebd582
Diff: http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/diff/95ebd582

Branch: refs/heads/master
Commit: 95ebd5826a0ebd7f6b47895f5f0e8c7c2309244b
Parents: 8e18be4
Author: Stian Soiland-Reyes <st...@apache.org>
Authored: Sun May 15 16:33:26 2016 +0100
Committer: Stian Soiland-Reyes <st...@apache.org>
Committed: Sun May 15 16:33:26 2016 +0100

----------------------------------------------------------------------
 pom.xml                           |  6 ++----
 taverna-databundle/pom.xml        | 13 ++++++++++++
 taverna-robundle/pom.xml          | 16 +++++++++++++++
 taverna-scufl2-annotation/pom.xml | 12 +++++++++++
 taverna-scufl2-wfdesc/pom.xml     | 37 ++++++++++++++++++++++------------
 5 files changed, 67 insertions(+), 17 deletions(-)
----------------------------------------------------------------------


http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/blob/95ebd582/pom.xml
----------------------------------------------------------------------
diff --git a/pom.xml b/pom.xml
index c2387bc..fa17111 100644
--- a/pom.xml
+++ b/pom.xml
@@ -20,7 +20,7 @@
 	<parent>
 		<groupId>org.apache.taverna</groupId>
 		<artifactId>apache-taverna-parent</artifactId>
-		<version>2-incubating</version>
+		<version>3-incubating-SNAPSHOT</version>
 	</parent>
 	<groupId>org.apache.taverna.language</groupId>
 	<artifactId>apache-taverna-language</artifactId>
@@ -31,9 +31,6 @@
 	<description>Taverna Language API for workflow definitions (SCUFL2)
 		and workflow inputs/outputs/run (DataBundle).
 	</description>
-	<properties>
-		<jena.version>3.0.0</jena.version> <!-- TAVERNA-892 - avoid 3.0.1 -->
-	</properties>
 
 	<build>
 		<plugins>
@@ -249,6 +246,7 @@
 			</dependency>
 		</dependencies>
 	</dependencyManagement>
+
 	<modules>
     <module>taverna-baclava-language</module>
     <module>taverna-databundle</module>

http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/blob/95ebd582/taverna-databundle/pom.xml
----------------------------------------------------------------------
diff --git a/taverna-databundle/pom.xml b/taverna-databundle/pom.xml
index eeff849..eefb74a 100644
--- a/taverna-databundle/pom.xml
+++ b/taverna-databundle/pom.xml
@@ -32,6 +32,19 @@
             <artifactId>jena-osgi</artifactId>
             <version>${jena.version}</version>
         </dependency>
+
+    <dependency>
+      <groupId>org.apache.servicemix.bundles</groupId>
+      <artifactId>org.apache.servicemix.bundles.xerces</artifactId>
+      <version>${servicemix.xerces.version}</version>
+    </dependency>
+        <!-- JENA-1178 workaround: Upgrade jsonlld-java -->
+    <dependency>
+      <groupId>com.github.jsonld-java</groupId>
+      <artifactId>jsonld-java</artifactId>
+      <version>${jsonldjava.version}</version>
+     </dependency>
+
         <dependency>
           <groupId>${project.groupId}</groupId>
           <artifactId>taverna-scufl2-wfbundle</artifactId>

http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/blob/95ebd582/taverna-robundle/pom.xml
----------------------------------------------------------------------
diff --git a/taverna-robundle/pom.xml b/taverna-robundle/pom.xml
index b884320..be1f5f2 100644
--- a/taverna-robundle/pom.xml
+++ b/taverna-robundle/pom.xml
@@ -60,6 +60,22 @@
 			<artifactId>jena-osgi</artifactId>
 			<version>${jena.version}</version>
 		</dependency>
+
+    <!-- Needed by jena-osgi -->
+    <dependency>
+      <groupId>org.apache.servicemix.bundles</groupId>
+      <artifactId>org.apache.servicemix.bundles.xerces</artifactId>
+      <version>${servicemix.xerces.version}</version>
+    </dependency>
+	<!-- JENA-1178 workaround: Upgrade jsonlld-java -->
+    <dependency>
+      <groupId>com.github.jsonld-java</groupId>
+      <artifactId>jsonld-java</artifactId>
+      <version>${jsonldjava.version}</version>
+     </dependency>
+
+
+
 <!--
 		<dependency>
 			<groupId>com.sun.xml.bind</groupId>

http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/blob/95ebd582/taverna-scufl2-annotation/pom.xml
----------------------------------------------------------------------
diff --git a/taverna-scufl2-annotation/pom.xml b/taverna-scufl2-annotation/pom.xml
index 40c584e..7c1ee19 100644
--- a/taverna-scufl2-annotation/pom.xml
+++ b/taverna-scufl2-annotation/pom.xml
@@ -49,5 +49,17 @@
 			<artifactId>jena-osgi</artifactId>
       <version>${jena.version}</version>
 		</dependency>
+    <dependency>
+      <groupId>org.apache.servicemix.bundles</groupId>
+      <artifactId>org.apache.servicemix.bundles.xerces</artifactId>
+      <version>${servicemix.xerces.version}</version>
+    </dependency>
+        <!-- JENA-1178 workaround: Upgrade jsonlld-java -->
+    <dependency>
+      <groupId>com.github.jsonld-java</groupId>
+      <artifactId>jsonld-java</artifactId>
+      <version>${jsonldjava.version}</version>
+     </dependency>
+
 	</dependencies>
 </project>

http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/blob/95ebd582/taverna-scufl2-wfdesc/pom.xml
----------------------------------------------------------------------
diff --git a/taverna-scufl2-wfdesc/pom.xml b/taverna-scufl2-wfdesc/pom.xml
index 411fe86..4cc8023 100755
--- a/taverna-scufl2-wfdesc/pom.xml
+++ b/taverna-scufl2-wfdesc/pom.xml
@@ -1,13 +1,13 @@
 <?xml version="1.0" encoding="UTF-8"?>
-<!-- Licensed to the Apache Software Foundation (ASF) under one or more contributor 
-	license agreements. See the NOTICE file distributed with this work for additional 
-	information regarding copyright ownership. The ASF licenses this file to 
-	You under the Apache License, Version 2.0 (the "License"); you may not use 
-	this file except in compliance with the License. You may obtain a copy of 
-	the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required 
-	by applicable law or agreed to in writing, software distributed under the 
-	License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS 
-	OF ANY KIND, either express or implied. See the License for the specific 
+<!-- Licensed to the Apache Software Foundation (ASF) under one or more contributor
+	license agreements. See the NOTICE file distributed with this work for additional
+	information regarding copyright ownership. The ASF licenses this file to
+	You under the Apache License, Version 2.0 (the "License"); you may not use
+	this file except in compliance with the License. You may obtain a copy of
+	the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required
+	by applicable law or agreed to in writing, software distributed under the
+	License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS
+	OF ANY KIND, either express or implied. See the License for the specific
 	language governing permissions and limitations under the License. -->
 <project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
 	<modelVersion>4.0.0</modelVersion>
@@ -74,7 +74,7 @@
 		</plugins>
 		<pluginManagement>
 			<plugins>
-				<!--This plugin's configuration is used to store Eclipse m2e settings 
+				<!--This plugin's configuration is used to store Eclipse m2e settings
 					only. It has no influence on the Maven build itself. -->
 				<plugin>
 					<groupId>org.eclipse.m2e</groupId>
@@ -140,6 +140,18 @@
 			<artifactId>jena-osgi</artifactId>
 			<version>${jena.version}</version>
 		</dependency>
+    <dependency>
+      <groupId>org.apache.servicemix.bundles</groupId>
+      <artifactId>org.apache.servicemix.bundles.xerces</artifactId>
+      <version>${servicemix.xerces.version}</version>
+    </dependency>
+        <!-- JENA-1178 workaround: Upgrade jsonlld-java -->
+    <dependency>
+      <groupId>com.github.jsonld-java</groupId>
+      <artifactId>jsonld-java</artifactId>
+      <version>${jsonldjava.version}</version>
+     </dependency>
+
 		<dependency>
 			<groupId>junit</groupId>
 			<artifactId>junit</artifactId>
@@ -147,7 +159,6 @@
 		<dependency>
 			<groupId>commons-beanutils</groupId>
 			<artifactId>commons-beanutils</artifactId>
-			<version>1.7.0</version>
 		</dependency>
 		<dependency>
 			<groupId>commons-io</groupId>
@@ -158,13 +169,13 @@
 		<dependency>
 			<groupId>org.codehaus.jackson</groupId>
 			<artifactId>jackson-mapper-asl</artifactId>
-			<version>1.9.3</version>
+			<version>${jackson.version}</version>
 			<type>jar</type>
 		</dependency>
 		<dependency>
 			<groupId>com.sun.jersey</groupId>
 			<artifactId>jersey-client</artifactId>
-			<version>1.11</version>
+			<version>${jersey.client.version}</version>
 			<scope>compile</scope>
 		</dependency>
 	</dependencies>