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Posted to reviews@spark.apache.org by srowen <gi...@git.apache.org> on 2016/07/12 12:44:27 UTC

[GitHub] spark pull request #14140: [SPARK-16426][MLlib] Fix bug that caused NaNs in ...

Github user srowen commented on a diff in the pull request:

    https://github.com/apache/spark/pull/14140#discussion_r70429952
  
    --- Diff: mllib/src/main/scala/org/apache/spark/mllib/regression/IsotonicRegression.scala ---
    @@ -408,8 +409,12 @@ class IsotonicRegression private (private var isotonic: Boolean) extends Seriali
        */
       private def parallelPoolAdjacentViolators(
           input: RDD[(Double, Double, Double)]): Array[(Double, Double, Double)] = {
    -    val parallelStepResult = input
    -      .sortBy(x => (x._2, x._1))
    +    val keyedInput = input
    --- End diff --
    
    I think there may be shorter ways to write this with `groupBy`, but, this and other approaches like that have the big drawback of reading lots of data into memory. Here you have to sort the whole partition in memory (!).
    
    How about `repartitionAndSortWithinPartitions`? oddly specific method, but, likely just what you need here, to both partition according to some criteria but then end up with sorted partitions. It's more scalable.


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