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Posted to dev@taverna.apache.org by "Stian Soiland-Reyes (JIRA)" <ji...@apache.org> on 2016/01/08 16:16:39 UTC
[jira] [Created] (TAVERNA-881) Save Taverna workflows as CWL
Stian Soiland-Reyes created TAVERNA-881:
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Summary: Save Taverna workflows as CWL
Key: TAVERNA-881
URL: https://issues.apache.org/jira/browse/TAVERNA-881
Project: Apache Taverna
Issue Type: New Feature
Components: Taverna Language
Reporter: Stian Soiland-Reyes
Priority: Minor
Many Taverna workflows can probably be represented in CWL - so this issue proposes to add support for serializing to CWL in Taverna Language.
I propose a staged approach:
a) Represent workflow structure only (A->B, B->C, B->D)
b) Save back CWL activities (from TAVERNA-877)
c) Save/Load other Taverna activities as TavernaRequirement
d) Save/Load other Taverna activities as DockerRequirement using TAVERNA-879
The semantics of CWL does not always allow all the iteration strategies of Taverna etc., so presumably only a subset of Taverna workflows could be saved correctly.
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