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Posted to issues@spark.apache.org by "Alexis Sarda-Espinosa (JIRA)" <ji...@apache.org> on 2019/02/24 01:13:00 UTC
[jira] [Updated] (SPARK-26980) Kryo deserialization not working
with KryoSerializable class
[ https://issues.apache.org/jira/browse/SPARK-26980?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
Alexis Sarda-Espinosa updated SPARK-26980:
------------------------------------------
Description:
I'm trying to create an {{Aggregator}} that uses a custom container that should be serialized with {{Kryo:}}
{code:java}
class StringSet(other: Collection<String>) : HashSet<String>(other), KryoSerializable {
companion object {
@JvmStatic
private val serialVersionUID = 1L
}
constructor() : this(Collections.emptyList())
override fun write(kryo: Kryo, output: Output) {
output.writeInt(this.size)
for (string in this) {
output.writeString(string)
}
}
override fun read(kryo: Kryo, input: Input) {
val size = input.readInt()
repeat(size) { this.add(input.readString()) }
}
}
{code}
However, if I look at the corresponding value in the {{Row}} after aggregation (for example by using {{collectAsList()}}), I see a {{byte[]}}. Interestingly, the first byte in that array seems to be some sort of noise, and I can deserialize by doing something like this:
{code:java}
val b = row.getAs<ByteArray>(2)
val input = Input(b.copyOfRange(1, b.size)) // extra byte?
val set = Kryo().readObject(input, StringSet::class.java)
{code}
Used configuration:
{code:java}
SparkConf()
.setAppName("Hello Spark with Kotlin")
.set("spark.serializer", "org.apache.spark.serializer.KryoSerializer")
.set("spark.kryo.registrationRequired", "true")
.registerKryoClasses(arrayOf(StringSet::class.java))
{code}
[Sample repo with all the code|https://github.com/asardaes/hello-spark-kotlin/tree/8e8a54fd81f0412507318149841c69bb17d8572c].
was:
I'm trying to create an {{Aggregator}} that uses a custom container that should be serialized with {{Kryo}}:
{code:java}
class StringSet(other: Collection<String>) : HashSet<String>(other), KryoSerializable {
companion object {
@JvmStatic
private val serialVersionUID = 1L
}
constructor() : this(Collections.emptyList())
override fun write(kryo: Kryo, output: Output) {
output.writeInt(this.size)
for (string in this) {
output.writeString(string)
}
}
override fun read(kryo: Kryo, input: Input) {
val size = input.readInt()
repeat(size) { this.add(input.readString()) }
}
}
{code}
However, if I look at the corresponding value in the {{Row}} after aggregation (for example by using {{collectAsList()}}), I see a {{byte[]}}. Interestingly, the first byte in that array seems to be some sort of noise, and I can deserialize by doing something like this:
{code:java}
val b = row.getAs<ByteArray>(2)
val input = Input(b.copyOfRange(1, b.size)) // extra byte?
val set = Kryo().readObject(input, StringSet::class.java)
{code}
Used configuration:
{code:java}
SparkConf()
.setAppName("Hello Spark with Kotlin")
.set("spark.serializer", "org.apache.spark.serializer.KryoSerializer")
.set("spark.kryo.registrationRequired", "true")
.registerKryoClasses(arrayOf(StringSet::class.java))
{code}
[Sample repo with all the code|https://github.com/asardaes/hello-spark-kotlin/tree/8e8a54fd81f0412507318149841c69bb17d8572c].
> Kryo deserialization not working with KryoSerializable class
> ------------------------------------------------------------
>
> Key: SPARK-26980
> URL: https://issues.apache.org/jira/browse/SPARK-26980
> Project: Spark
> Issue Type: Bug
> Components: SQL
> Affects Versions: 2.4.0
> Environment: Local Spark v2.4.0
> Kotlin v1.3.21
> Reporter: Alexis Sarda-Espinosa
> Priority: Minor
> Labels: kryo, serialization
>
> I'm trying to create an {{Aggregator}} that uses a custom container that should be serialized with {{Kryo:}}
> {code:java}
> class StringSet(other: Collection<String>) : HashSet<String>(other), KryoSerializable {
> companion object {
> @JvmStatic
> private val serialVersionUID = 1L
> }
> constructor() : this(Collections.emptyList())
> override fun write(kryo: Kryo, output: Output) {
> output.writeInt(this.size)
> for (string in this) {
> output.writeString(string)
> }
> }
> override fun read(kryo: Kryo, input: Input) {
> val size = input.readInt()
> repeat(size) { this.add(input.readString()) }
> }
> }
> {code}
> However, if I look at the corresponding value in the {{Row}} after aggregation (for example by using {{collectAsList()}}), I see a {{byte[]}}. Interestingly, the first byte in that array seems to be some sort of noise, and I can deserialize by doing something like this:
> {code:java}
> val b = row.getAs<ByteArray>(2)
> val input = Input(b.copyOfRange(1, b.size)) // extra byte?
> val set = Kryo().readObject(input, StringSet::class.java)
> {code}
> Used configuration:
> {code:java}
> SparkConf()
> .setAppName("Hello Spark with Kotlin")
> .set("spark.serializer", "org.apache.spark.serializer.KryoSerializer")
> .set("spark.kryo.registrationRequired", "true")
> .registerKryoClasses(arrayOf(StringSet::class.java))
> {code}
> [Sample repo with all the code|https://github.com/asardaes/hello-spark-kotlin/tree/8e8a54fd81f0412507318149841c69bb17d8572c].
>
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