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Posted to commits@uima.apache.org by tw...@apache.org on 2007/07/11 17:24:00 UTC

svn commit: r555300 [4/4] - in /incubator/uima/uimaj/trunk/uima-docbooks/src: docbook/overview_and_setup/ olink/overview_and_setup/ olink/references/ olink/tools/

Modified: incubator/uima/uimaj/trunk/uima-docbooks/src/olink/tools/htmlsingle-target.db
URL: http://svn.apache.org/viewvc/incubator/uima/uimaj/trunk/uima-docbooks/src/olink/tools/htmlsingle-target.db?view=diff&rev=555300&r1=555299&r2=555300
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--- incubator/uima/uimaj/trunk/uima-docbooks/src/olink/tools/htmlsingle-target.db (original)
+++ incubator/uima/uimaj/trunk/uima-docbooks/src/olink/tools/htmlsingle-target.db Wed Jul 11 08:23:58 2007
@@ -1,15 +1,15 @@
-<div element="book" href="#d0e2" number="" lang="en"><ttl>UIMA Tools Guide and Reference</ttl><xreftext>UIMA Tools Guide and Reference</xreftext><div element="chapter" href="#ugr.tools.cde" number="1" targetptr="ugr.tools.cde"><ttl>Component Descriptor Editor User's Guide</ttl><xreftext>Chapter 1, <i xmlns:xlink="http://www.w3.org/1999/xlink">Component Descriptor Editor User's Guide</i></xreftext><div element="section" href="#ugr.tools.cde.launching" number="1.1" targetptr="ugr.tools.cde.launching"><ttl>Launching the Component Descriptor Editor</ttl><xreftext>Section 1.1, “Launching the Component Descriptor Editor”</xreftext></div><div element="section" href="#ugr.tools.cde.creating_new_ae_descriptor" number="1.2" targetptr="ugr.tools.cde.creating_new_ae_descriptor"><ttl>Creating a New AE Descriptor</ttl><xreftext>Section 1.2, “Creating a New AE Descriptor”</xreftext></div><div element="section" href="#ugr.tools.cde.pages_within_the_editor" numbe
 r="1.3" targetptr="ugr.tools.cde.pages_within_the_editor"><ttl>Pages within the Editor</ttl><xreftext>Section 1.3, “Pages within the Editor”</xreftext><div element="section" href="#ugr.tools.cde.adjusting_display_of_pages" number="1.3.1" targetptr="ugr.tools.cde.adjusting_display_of_pages"><ttl>Adjusting the display of pages</ttl><xreftext>Section 1.3.1, “Adjusting the display of pages”</xreftext></div></div><div element="section" href="#ugr.tools.cde.overview_page" number="1.4" targetptr="ugr.tools.cde.overview_page"><ttl>Overview Page</ttl><xreftext>Section 1.4, “Overview Page”</xreftext><div element="section" href="#ugr.tools.cde.overview_page.implementation_details" number="1.4.1" targetptr="ugr.tools.cde.overview_page.implementation_details"><ttl>Implementation Details</ttl><xreftext>Section 1.4.1, “Implementation Details”</xreftext></div><div element="section" href="#ugr.tools.cde.overview_page.runtime_info" number="1
 .4.2" targetptr="ugr.tools.cde.overview_page.runtime_info"><ttl>Runtime Information</ttl><xreftext>Section 1.4.2, “Runtime Information”</xreftext></div><div element="section" href="#ugr.tools.cde.overview_page.overall_id_info" number="1.4.3" targetptr="ugr.tools.cde.overview_page.overall_id_info"><ttl>Overall Identification Information</ttl><xreftext>Section 1.4.3, “Overall Identification Information”</xreftext></div></div><div element="section" href="#ugr.tools.cde.aggregate_page" number="1.5" targetptr="ugr.tools.cde.aggregate_page"><ttl>Aggregate Page</ttl><xreftext>Section 1.5, “Aggregate Page”</xreftext><div element="section" href="#ugr.tools.cde.aggregate_page.adding_components_more_than_once" number="1.5.1" targetptr="ugr.tools.cde.aggregate_page.adding_components_more_than_once"><ttl>Adding components more than once</ttl><xreftext>Section 1.5.1, “Adding components more than once”</xreftext></div><div element="sectio
 n" href="#ugr.tools.cde.aggregate_page.adding_removing_components_from_flow" number="1.5.2" targetptr="ugr.tools.cde.aggregate_page.adding_removing_components_from_flow"><ttl>Adding or Removing components in a flow</ttl><xreftext>Section 1.5.2, “Adding or Removing components in a flow”</xreftext></div><div element="section" href="#ugr.tools.cde.aggregate_page.adding_remote_aes" number="1.5.3" targetptr="ugr.tools.cde.aggregate_page.adding_remote_aes"><ttl>Adding remote Analysis Engines</ttl><xreftext>Section 1.5.3, “Adding remote Analysis Engines”</xreftext></div><div element="section" href="#ugr.tools.cde.aggregate_page.connecting_to_remote_services" number="1.5.4" targetptr="ugr.tools.cde.aggregate_page.connecting_to_remote_services"><ttl>Connecting to Remote Services</ttl><xreftext>Section 1.5.4, “Connecting to Remote Services”</xreftext></div><div element="section" href="#ugr.tools.cde.aggregate_page.finding_aes_by_searching" number
 ="1.5.5" targetptr="ugr.tools.cde.aggregate_page.finding_aes_by_searching"><ttl>Finding Analysis Engines by searching</ttl><xreftext>Section 1.5.5, “Finding Analysis Engines by searching”</xreftext></div><div element="section" href="#ugr.tools.cde.aggregate_page.component_engine_flow" number="1.5.6" targetptr="ugr.tools.cde.aggregate_page.component_engine_flow"><ttl>Component Engine Flow</ttl><xreftext>Section 1.5.6, “Component Engine Flow”</xreftext></div></div><div element="section" href="#ugr.tools.cde.parm_definition" number="1.6" targetptr="ugr.tools.cde.parm_definition"><ttl>Parameters Definition Page</ttl><xreftext>Section 1.6, “Parameters Definition Page”</xreftext><div element="section" href="#ugr.tools.cde.parm_definition.using_groups" number="1.6.1" targetptr="ugr.tools.cde.parm_definition.using_groups"><ttl>Using groups</ttl><xreftext>Section 1.6.1, “Using groups”</xreftext></div><div element="section" href="#ug
 r.tools.cde.parm_definition.aggregates" number="1.6.2" targetptr="ugr.tools.cde.parm_definition.aggregates"><ttl>Parameter declarations for Aggregates</ttl><xreftext>Section 1.6.2, “Parameter declarations for Aggregates”</xreftext><obj element="phrase" href="#ugr.tools.cde.parm_definition.removing_groups" number="" targetptr="ugr.tools.cde.parm_definition.removing_groups"><ttl>???TITLE???</ttl><xreftext>???</xreftext></obj></div></div><div element="section" href="#ugr.tools.cde.parameter_settings" number="1.7" targetptr="ugr.tools.cde.parameter_settings"><ttl>Parameter Settings Page</ttl><xreftext>Section 1.7, “Parameter Settings Page”</xreftext></div><div element="section" href="#ugr.tools.cde.type_system" number="1.8" targetptr="ugr.tools.cde.type_system"><ttl>Type System Page</ttl><xreftext>Section 1.8, “Type System Page”</xreftext><obj element="para" href="#ugr.tools.cde.auto_jcasgen" number="" targetptr="ugr.tools.cde.auto_jcasgen"
 ><ttl>???TITLE???</ttl><xreftext>Section 1.8, “Type System Page”</xreftext></obj><div element="section" href="#ugr.tools.cde.type_system.exporting" number="1.8.1" targetptr="ugr.tools.cde.type_system.exporting"><ttl>Exporting</ttl><xreftext>Section 1.8.1, “Exporting”</xreftext></div></div><div element="section" href="#ugr.tools.cde.capabilities" number="1.9" targetptr="ugr.tools.cde.capabilities"><ttl>Capabilities Page</ttl><xreftext>Section 1.9, “Capabilities Page”</xreftext><div element="section" href="#ugr.tools.cde.capabilities.sofa_name_mapping" number="1.9.1" targetptr="ugr.tools.cde.capabilities.sofa_name_mapping"><ttl>Sofa (and view) name mappings</ttl><xreftext>Section 1.9.1, “Sofa (and view) name mappings”</xreftext></div></div><div element="section" href="#ugr.tools.cde.indexes" number="1.10" targetptr="ugr.tools.cde.indexes"><ttl>Indexes Page</ttl><xreftext>Section 1.10, “Indexes Page”</xreftext></d
 iv><div element="section" href="#ugr.tools.cde.resources" number="1.11" targetptr="ugr.tools.cde.resources"><ttl>Resources Page</ttl><xreftext>Section 1.11, “Resources Page”</xreftext><div element="section" href="#ugr.tools.cde.resources.binding" number="1.11.1" targetptr="ugr.tools.cde.resources.binding"><ttl>Binding</ttl><xreftext>Section 1.11.1, “Binding”</xreftext></div><div element="section" href="#ugr.tools.cde.resources.aggregates" number="1.11.2" targetptr="ugr.tools.cde.resources.aggregates"><ttl>Resources with Aggregates</ttl><xreftext>Section 1.11.2, “Resources with Aggregates”</xreftext></div><div element="section" href="#ugr.tools.cde.resources.imports_exports" number="1.11.3" targetptr="ugr.tools.cde.resources.imports_exports"><ttl>Imports and Exports</ttl><xreftext>Section 1.11.3, “Imports and Exports”</xreftext></div></div><div element="section" href="#ugr.tools.cde.source" number="1.12" targetptr="ugr.tools
 .cde.source"><ttl>Source Page</ttl><xreftext>Section 1.12, “Source Page”</xreftext><div element="section" href="#ugr.tools.cde.source.formatting" number="1.12.1" targetptr="ugr.tools.cde.source.formatting"><ttl>Source formatting – indentation</ttl><xreftext>Section 1.12.1, “Source formatting – indentation”</xreftext></div></div><div element="section" href="#ugr.tools.cde.creating_self_contained_type_system" number="1.13" targetptr="ugr.tools.cde.creating_self_contained_type_system"><ttl>Creating a Self-Contained Type System</ttl><xreftext>Section 1.13, “Creating a Self-Contained Type System”</xreftext></div><div element="section" href="#ugr.tools.cde.creating_other_descriptor_components" number="1.14" targetptr="ugr.tools.cde.creating_other_descriptor_components"><ttl>Creating Other Descriptor Components</ttl><xreftext>Section 1.14, “Creating Other Descriptor Components”</xreftext></div></div><div element="chapter
 " href="#ugr.tools.cpe" number="2" targetptr="ugr.tools.cpe"><ttl>Collection Processing Engine Configurator User's Guide</ttl><xreftext>Chapter 2, <i xmlns:xlink="http://www.w3.org/1999/xlink">Collection Processing Engine Configurator User's Guide</i></xreftext><div element="section" href="#ugr.tools.cpe.limitations" number="2.1" targetptr="ugr.tools.cpe.limitations"><ttl>Limitations of the CPE Configurator</ttl><xreftext>Section 2.1, “Limitations of the CPE Configurator”</xreftext></div><div element="section" href="#ugr.tools.cpe.starting" number="2.2" targetptr="ugr.tools.cpe.starting"><ttl>Starting the CPE Configurator</ttl><xreftext>Section 2.2, “Starting the CPE Configurator”</xreftext></div><div element="section" href="#ugr.tools.cpe.selecting_component_descriptors" number="2.3" targetptr="ugr.tools.cpe.selecting_component_descriptors"><ttl>Selecting Component Descriptors</ttl><xreftext>Section 2.3, “Selecting Component Descriptors�
 �€</xreftext></div><div element="section" href="#ugr.tools.cpe.running" number="2.4" targetptr="ugr.tools.cpe.running"><ttl>Running a Collection Processing Engine</ttl><xreftext>Section 2.4, “Running a Collection Processing Engine”</xreftext></div><div element="section" href="#ugr.tools.cpe.file_menu" number="2.5" targetptr="ugr.tools.cpe.file_menu"><ttl>The File Menu</ttl><xreftext>Section 2.5, “The File Menu”</xreftext></div><div element="section" href="#ugr.tools.cpe.help_menu" number="2.6" targetptr="ugr.tools.cpe.help_menu"><ttl>The Help Menu</ttl><xreftext>Section 2.6, “The Help Menu”</xreftext></div></div><div element="chapter" href="#ugr.tools.doc_analyzer" number="3" targetptr="ugr.tools.doc_analyzer"><ttl>Document Analyzer User's Guide</ttl><xreftext>Chapter 3, <i xmlns:xlink="http://www.w3.org/1999/xlink">Document Analyzer User's Guide</i></xreftext><div element="section" href="#ugr.tools.doc_analyzer.starting" number="
 3.1" targetptr="ugr.tools.doc_analyzer.starting"><ttl>Starting the Document Analyzer</ttl><xreftext>Section 3.1, “Starting the Document Analyzer”</xreftext></div><div element="section" href="#ugr.tools.doc_analyzer.running_an_ae" number="3.2" targetptr="ugr.tools.doc_analyzer.running_an_ae"><ttl>Running an AE</ttl><xreftext>Section 3.2, “Running an AE”</xreftext></div><div element="section" href="#ugr.tools.doc_analyzer.viewing_results" number="3.3" targetptr="ugr.tools.doc_analyzer.viewing_results"><ttl>Viewing the Analysis Results</ttl><xreftext>Section 3.3, “Viewing the Analysis Results”</xreftext></div><div element="section" href="#ugr.tools.doc_analyzer.configuring" number="3.4" targetptr="ugr.tools.doc_analyzer.configuring"><ttl>Configuring the Annotation Viewer</ttl><xreftext>Section 3.4, “Configuring the Annotation Viewer”</xreftext></div><div element="section" href="#ugr.tools.doc_analyzer.interactive_mode" number=
 "3.5" targetptr="ugr.tools.doc_analyzer.interactive_mode"><ttl>Interactive Mode</ttl><xreftext>Section 3.5, “Interactive Mode”</xreftext></div><div element="section" href="#ugr.tools.doc_analyzer.view_mode" number="3.6" targetptr="ugr.tools.doc_analyzer.view_mode"><ttl>View Mode</ttl><xreftext>Section 3.6, “View Mode”</xreftext></div></div><div element="chapter" href="#ugr.tools.annotation_viewer" number="4" targetptr="ugr.tools.annotation_viewer"><ttl>Annotation Viewer</ttl><xreftext>Chapter 4, <i xmlns:xlink="http://www.w3.org/1999/xlink">Annotation Viewer</i></xreftext></div><div element="chapter" href="#ugr.tools.cvd" number="5" targetptr="ugr.tools.cvd"><ttl>CAS Visual Debugger</ttl><xreftext>Chapter 5, <i xmlns:xlink="http://www.w3.org/1999/xlink">CAS Visual Debugger</i></xreftext><div element="section" href="#ugr.tools.cvd.introduction" number="5.1" targetptr="ugr.tools.cvd.introduction"><ttl>Introduction</ttl><xreftext>Section 5.1, 
 “Introduction”</xreftext><div element="section" href="#ugr.cvd.introduction.running" number="5.1.1" targetptr="ugr.cvd.introduction.running"><ttl>Running CVD</ttl><xreftext>Section 5.1.1, “Running CVD”</xreftext></div></div><div element="section" href="#cvd.errorHandling" number="5.2" targetptr="cvd.errorHandling"><ttl>Error Handling</ttl><xreftext>Section 5.2, “Error Handling”</xreftext></div><div element="section" href="#cvd.preferencesFile" number="5.3" targetptr="cvd.preferencesFile"><ttl>Preferences File</ttl><xreftext>Section 5.3, “Preferences File”</xreftext></div><div element="section" href="#cvd.theMenus" number="5.4" targetptr="cvd.theMenus"><ttl>The Menus</ttl><xreftext>Section 5.4, “The Menus”</xreftext><div element="section" href="#cvd.fileMenu" number="5.4.1" targetptr="cvd.fileMenu"><ttl>The File Menu</ttl><xreftext>Section 5.4.1, “The File Menu”</xreftext></div><div element="section" h
 ref="#cvd.editMenu" number="5.4.2" targetptr="cvd.editMenu"><ttl>The Edit Menu</ttl><xreftext>Section 5.4.2, “The Edit Menu”</xreftext><obj element="figure" href="#cvd.figure.editMenu" number="5.1" targetptr="cvd.figure.editMenu"><ttl>The Edit menu</ttl><xreftext>Figure 5.1, “The Edit menu”</xreftext></obj></div><div element="section" href="#cvd.runMenu" number="5.4.3" targetptr="cvd.runMenu"><ttl>The Run Menu</ttl><xreftext>Section 5.4.3, “The Run Menu”</xreftext><obj element="figure" href="#cvd.figure.runMenu" number="5.2" targetptr="cvd.figure.runMenu"><ttl>The Run menu</ttl><xreftext>Figure 5.2, “The Run menu”</xreftext></obj></div><div element="section" href="#cvd.toolsMenu" number="5.4.4" targetptr="cvd.toolsMenu"><ttl>The tools menu</ttl><xreftext>Section 5.4.4, “The tools menu”</xreftext><div element="section" href="#cvd.viewTypeSystem" number="5.4.4.1" targetptr="cvd.viewTypeSystem"><ttl>View Type Syst
 em</ttl><xreftext>Section 5.4.4.1, “View Type System”</xreftext><obj element="figure" href="#cvd.figure.typeSystemViewer" number="5.3" targetptr="cvd.figure.typeSystemViewer"><ttl>The type system viewer</ttl><xreftext>Figure 5.3, “The type system viewer”</xreftext></obj></div><div element="section" href="#cvd.showSelectedAnnotations" number="5.4.4.2" targetptr="cvd.showSelectedAnnotations"><ttl>Show Selected Annotations</ttl><xreftext>Section 5.4.4.2, “Show Selected Annotations”</xreftext><obj element="figure" href="#AnnotationViewerFigure" number="5.4" targetptr="AnnotationViewerFigure"><ttl>
+<div element="book" href="#d0e2" number="" lang="en"><ttl>UIMA Tools Guide and Reference</ttl><xreftext>UIMA Tools Guide and Reference</xreftext><div element="chapter" href="#ugr.tools.cde" number="1" targetptr="ugr.tools.cde"><ttl>Component Descriptor Editor User's Guide</ttl><xreftext>Chapter 1, <i xmlns:xlink="http://www.w3.org/1999/xlink">Component Descriptor Editor User's Guide</i></xreftext><div element="section" href="#ugr.tools.cde.launching" number="1.1" targetptr="ugr.tools.cde.launching"><ttl>Launching the Component Descriptor Editor</ttl><xreftext>Section 1.1, “Launching the Component Descriptor Editor”</xreftext></div><div element="section" href="#ugr.tools.cde.creating_new_ae_descriptor" number="1.2" targetptr="ugr.tools.cde.creating_new_ae_descriptor"><ttl>Creating a New AE Descriptor</ttl><xreftext>Section 1.2, “Creating a New AE Descriptor”</xreftext></div><div element="section" href="#ugr.tools.cde.pages_within_the_editor" numbe
 r="1.3" targetptr="ugr.tools.cde.pages_within_the_editor"><ttl>Pages within the Editor</ttl><xreftext>Section 1.3, “Pages within the Editor”</xreftext><div element="section" href="#ugr.tools.cde.adjusting_display_of_pages" number="1.3.1" targetptr="ugr.tools.cde.adjusting_display_of_pages"><ttl>Adjusting the display of pages</ttl><xreftext>Section 1.3.1, “Adjusting the display of pages”</xreftext></div></div><div element="section" href="#ugr.tools.cde.overview_page" number="1.4" targetptr="ugr.tools.cde.overview_page"><ttl>Overview Page</ttl><xreftext>Section 1.4, “Overview Page”</xreftext><div element="section" href="#ugr.tools.cde.overview_page.implementation_details" number="1.4.1" targetptr="ugr.tools.cde.overview_page.implementation_details"><ttl>Implementation Details</ttl><xreftext>Section 1.4.1, “Implementation Details”</xreftext></div><div element="section" href="#ugr.tools.cde.overview_page.runtime_info" number="1
 .4.2" targetptr="ugr.tools.cde.overview_page.runtime_info"><ttl>Runtime Information</ttl><xreftext>Section 1.4.2, “Runtime Information”</xreftext></div><div element="section" href="#ugr.tools.cde.overview_page.overall_id_info" number="1.4.3" targetptr="ugr.tools.cde.overview_page.overall_id_info"><ttl>Overall Identification Information</ttl><xreftext>Section 1.4.3, “Overall Identification Information”</xreftext></div></div><div element="section" href="#ugr.tools.cde.aggregate_page" number="1.5" targetptr="ugr.tools.cde.aggregate_page"><ttl>Aggregate Page</ttl><xreftext>Section 1.5, “Aggregate Page”</xreftext><div element="section" href="#ugr.tools.cde.aggregate_page.adding_components_more_than_once" number="1.5.1" targetptr="ugr.tools.cde.aggregate_page.adding_components_more_than_once"><ttl>Adding components more than once</ttl><xreftext>Section 1.5.1, “Adding components more than once”</xreftext></div><div element="sectio
 n" href="#ugr.tools.cde.aggregate_page.adding_removing_components_from_flow" number="1.5.2" targetptr="ugr.tools.cde.aggregate_page.adding_removing_components_from_flow"><ttl>Adding or Removing components in a flow</ttl><xreftext>Section 1.5.2, “Adding or Removing components in a flow”</xreftext></div><div element="section" href="#ugr.tools.cde.aggregate_page.adding_remote_aes" number="1.5.3" targetptr="ugr.tools.cde.aggregate_page.adding_remote_aes"><ttl>Adding remote Analysis Engines</ttl><xreftext>Section 1.5.3, “Adding remote Analysis Engines”</xreftext></div><div element="section" href="#ugr.tools.cde.aggregate_page.connecting_to_remote_services" number="1.5.4" targetptr="ugr.tools.cde.aggregate_page.connecting_to_remote_services"><ttl>Connecting to Remote Services</ttl><xreftext>Section 1.5.4, “Connecting to Remote Services”</xreftext></div><div element="section" href="#ugr.tools.cde.aggregate_page.finding_aes_by_searching" number
 ="1.5.5" targetptr="ugr.tools.cde.aggregate_page.finding_aes_by_searching"><ttl>Finding Analysis Engines by searching</ttl><xreftext>Section 1.5.5, “Finding Analysis Engines by searching”</xreftext></div><div element="section" href="#ugr.tools.cde.aggregate_page.component_engine_flow" number="1.5.6" targetptr="ugr.tools.cde.aggregate_page.component_engine_flow"><ttl>Component Engine Flow</ttl><xreftext>Section 1.5.6, “Component Engine Flow”</xreftext></div></div><div element="section" href="#ugr.tools.cde.parm_definition" number="1.6" targetptr="ugr.tools.cde.parm_definition"><ttl>Parameters Definition Page</ttl><xreftext>Section 1.6, “Parameters Definition Page”</xreftext><div element="section" href="#ugr.tools.cde.parm_definition.using_groups" number="1.6.1" targetptr="ugr.tools.cde.parm_definition.using_groups"><ttl>Using groups</ttl><xreftext>Section 1.6.1, “Using groups”</xreftext></div><div element="section" href="#ug
 r.tools.cde.parm_definition.aggregates" number="1.6.2" targetptr="ugr.tools.cde.parm_definition.aggregates"><ttl>Parameter declarations for Aggregates</ttl><xreftext>Section 1.6.2, “Parameter declarations for Aggregates”</xreftext><obj element="phrase" href="#ugr.tools.cde.parm_definition.removing_groups" number="" targetptr="ugr.tools.cde.parm_definition.removing_groups"><ttl>???TITLE???</ttl><xreftext>???</xreftext></obj></div></div><div element="section" href="#ugr.tools.cde.parameter_settings" number="1.7" targetptr="ugr.tools.cde.parameter_settings"><ttl>Parameter Settings Page</ttl><xreftext>Section 1.7, “Parameter Settings Page”</xreftext></div><div element="section" href="#ugr.tools.cde.type_system" number="1.8" targetptr="ugr.tools.cde.type_system"><ttl>Type System Page</ttl><xreftext>Section 1.8, “Type System Page”</xreftext><obj element="para" href="#ugr.tools.cde.auto_jcasgen" number="" targetptr="ugr.tools.cde.auto_jcasgen"
 ><ttl>???TITLE???</ttl><xreftext>Section 1.8, “Type System Page”</xreftext></obj><div element="section" href="#ugr.tools.cde.type_system.exporting" number="1.8.1" targetptr="ugr.tools.cde.type_system.exporting"><ttl>Exporting</ttl><xreftext>Section 1.8.1, “Exporting”</xreftext></div></div><div element="section" href="#ugr.tools.cde.capabilities" number="1.9" targetptr="ugr.tools.cde.capabilities"><ttl>Capabilities Page</ttl><xreftext>Section 1.9, “Capabilities Page”</xreftext><div element="section" href="#ugr.tools.cde.capabilities.sofa_name_mapping" number="1.9.1" targetptr="ugr.tools.cde.capabilities.sofa_name_mapping"><ttl>Sofa (and view) name mappings</ttl><xreftext>Section 1.9.1, “Sofa (and view) name mappings”</xreftext></div></div><div element="section" href="#ugr.tools.cde.indexes" number="1.10" targetptr="ugr.tools.cde.indexes"><ttl>Indexes Page</ttl><xreftext>Section 1.10, “Indexes Page”</xreftext></d
 iv><div element="section" href="#ugr.tools.cde.resources" number="1.11" targetptr="ugr.tools.cde.resources"><ttl>Resources Page</ttl><xreftext>Section 1.11, “Resources Page”</xreftext><div element="section" href="#ugr.tools.cde.resources.binding" number="1.11.1" targetptr="ugr.tools.cde.resources.binding"><ttl>Binding</ttl><xreftext>Section 1.11.1, “Binding”</xreftext></div><div element="section" href="#ugr.tools.cde.resources.aggregates" number="1.11.2" targetptr="ugr.tools.cde.resources.aggregates"><ttl>Resources with Aggregates</ttl><xreftext>Section 1.11.2, “Resources with Aggregates”</xreftext></div><div element="section" href="#ugr.tools.cde.resources.imports_exports" number="1.11.3" targetptr="ugr.tools.cde.resources.imports_exports"><ttl>Imports and Exports</ttl><xreftext>Section 1.11.3, “Imports and Exports”</xreftext></div></div><div element="section" href="#ugr.tools.cde.source" number="1.12" targetptr="ugr.tools
 .cde.source"><ttl>Source Page</ttl><xreftext>Section 1.12, “Source Page”</xreftext><div element="section" href="#ugr.tools.cde.source.formatting" number="1.12.1" targetptr="ugr.tools.cde.source.formatting"><ttl>Source formatting – indentation</ttl><xreftext>Section 1.12.1, “Source formatting – indentation”</xreftext></div></div><div element="section" href="#ugr.tools.cde.creating_self_contained_type_system" number="1.13" targetptr="ugr.tools.cde.creating_self_contained_type_system"><ttl>Creating a Self-Contained Type System</ttl><xreftext>Section 1.13, “Creating a Self-Contained Type System”</xreftext></div><div element="section" href="#ugr.tools.cde.creating_other_descriptor_components" number="1.14" targetptr="ugr.tools.cde.creating_other_descriptor_components"><ttl>Creating Other Descriptor Components</ttl><xreftext>Section 1.14, “Creating Other Descriptor Components”</xreftext></div></div><div element="chapter
 " href="#ugr.tools.cpe" number="2" targetptr="ugr.tools.cpe"><ttl>Collection Processing Engine Configurator User's Guide</ttl><xreftext>Chapter 2, <i xmlns:xlink="http://www.w3.org/1999/xlink">Collection Processing Engine Configurator User's Guide</i></xreftext><div element="section" href="#ugr.tools.cpe.limitations" number="2.1" targetptr="ugr.tools.cpe.limitations"><ttl>Limitations of the CPE Configurator</ttl><xreftext>Section 2.1, “Limitations of the CPE Configurator”</xreftext></div><div element="section" href="#ugr.tools.cpe.starting" number="2.2" targetptr="ugr.tools.cpe.starting"><ttl>Starting the CPE Configurator</ttl><xreftext>Section 2.2, “Starting the CPE Configurator”</xreftext></div><div element="section" href="#ugr.tools.cpe.selecting_component_descriptors" number="2.3" targetptr="ugr.tools.cpe.selecting_component_descriptors"><ttl>Selecting Component Descriptors</ttl><xreftext>Section 2.3, “Selecting Component Descriptors�
 �€</xreftext></div><div element="section" href="#ugr.tools.cpe.running" number="2.4" targetptr="ugr.tools.cpe.running"><ttl>Running a Collection Processing Engine</ttl><xreftext>Section 2.4, “Running a Collection Processing Engine”</xreftext></div><div element="section" href="#ugr.tools.cpe.file_menu" number="2.5" targetptr="ugr.tools.cpe.file_menu"><ttl>The File Menu</ttl><xreftext>Section 2.5, “The File Menu”</xreftext></div><div element="section" href="#ugr.tools.cpe.help_menu" number="2.6" targetptr="ugr.tools.cpe.help_menu"><ttl>The Help Menu</ttl><xreftext>Section 2.6, “The Help Menu”</xreftext></div></div><div element="chapter" href="#ugr.tools.doc_analyzer" number="3" targetptr="ugr.tools.doc_analyzer"><ttl>Document Analyzer User's Guide</ttl><xreftext>Chapter 3, <i xmlns:xlink="http://www.w3.org/1999/xlink">Document Analyzer User's Guide</i></xreftext><div element="section" href="#ugr.tools.doc_analyzer.starting" number="
 3.1" targetptr="ugr.tools.doc_analyzer.starting"><ttl>Starting the Document Analyzer</ttl><xreftext>Section 3.1, “Starting the Document Analyzer”</xreftext></div><div element="section" href="#ugr.tools.doc_analyzer.running_an_ae" number="3.2" targetptr="ugr.tools.doc_analyzer.running_an_ae"><ttl>Running an AE</ttl><xreftext>Section 3.2, “Running an AE”</xreftext></div><div element="section" href="#ugr.tools.doc_analyzer.viewing_results" number="3.3" targetptr="ugr.tools.doc_analyzer.viewing_results"><ttl>Viewing the Analysis Results</ttl><xreftext>Section 3.3, “Viewing the Analysis Results”</xreftext></div><div element="section" href="#ugr.tools.doc_analyzer.configuring" number="3.4" targetptr="ugr.tools.doc_analyzer.configuring"><ttl>Configuring the Annotation Viewer</ttl><xreftext>Section 3.4, “Configuring the Annotation Viewer”</xreftext></div><div element="section" href="#ugr.tools.doc_analyzer.interactive_mode" number=
 "3.5" targetptr="ugr.tools.doc_analyzer.interactive_mode"><ttl>Interactive Mode</ttl><xreftext>Section 3.5, “Interactive Mode”</xreftext></div><div element="section" href="#ugr.tools.doc_analyzer.view_mode" number="3.6" targetptr="ugr.tools.doc_analyzer.view_mode"><ttl>View Mode</ttl><xreftext>Section 3.6, “View Mode”</xreftext></div></div><div element="chapter" href="#ugr.tools.annotation_viewer" number="4" targetptr="ugr.tools.annotation_viewer"><ttl>Annotation Viewer</ttl><xreftext>Chapter 4, <i xmlns:xlink="http://www.w3.org/1999/xlink">Annotation Viewer</i></xreftext></div><div element="chapter" href="#ugr.tools.cvd" number="5" targetptr="ugr.tools.cvd"><ttl>CAS Visual Debugger</ttl><xreftext>Chapter 5, <i xmlns:xlink="http://www.w3.org/1999/xlink">CAS Visual Debugger</i></xreftext><div element="section" href="#ugr.tools.cvd.introduction" number="5.1" targetptr="ugr.tools.cvd.introduction"><ttl>Introduction</ttl><xreftext>Section 5.1, 
 “Introduction”</xreftext><div element="section" href="#ugr.cvd.introduction.running" number="5.1.1" targetptr="ugr.cvd.introduction.running"><ttl>Running CVD</ttl><xreftext>Section 5.1.1, “Running CVD”</xreftext></div></div><div element="section" href="#cvd.errorHandling" number="5.2" targetptr="cvd.errorHandling"><ttl>Error Handling</ttl><xreftext>Section 5.2, “Error Handling”</xreftext></div><div element="section" href="#cvd.preferencesFile" number="5.3" targetptr="cvd.preferencesFile"><ttl>Preferences File</ttl><xreftext>Section 5.3, “Preferences File”</xreftext></div><div element="section" href="#cvd.theMenus" number="5.4" targetptr="cvd.theMenus"><ttl>The Menus</ttl><xreftext>Section 5.4, “The Menus”</xreftext><div element="section" href="#cvd.fileMenu" number="5.4.1" targetptr="cvd.fileMenu"><ttl>The File Menu</ttl><xreftext>Section 5.4.1, “The File Menu”</xreftext></div><div element="section" h
 ref="#cvd.editMenu" number="5.4.2" targetptr="cvd.editMenu"><ttl>The Edit Menu</ttl><xreftext>Section 5.4.2, “The Edit Menu”</xreftext></div><div element="section" href="#cvd.runMenu" number="5.4.3" targetptr="cvd.runMenu"><ttl>The Run Menu</ttl><xreftext>Section 5.4.3, “The Run Menu”</xreftext></div><div element="section" href="#cvd.toolsMenu" number="5.4.4" targetptr="cvd.toolsMenu"><ttl>The tools menu</ttl><xreftext>Section 5.4.4, “The tools menu”</xreftext><div element="section" href="#cvd.viewTypeSystem" number="5.4.4.1" targetptr="cvd.viewTypeSystem"><ttl>View Type System</ttl><xreftext>Section 5.4.4.1, “View Type System”</xreftext></div><div element="section" href="#cvd.showSelectedAnnotations" number="5.4.4.2" targetptr="cvd.showSelectedAnnotations"><ttl>Show Selected Annotations</ttl><xreftext>Section 5.4.4.2, “Show Selected Annotations”</xreftext><obj element="figure" href="#AnnotationViewerFigure" nu
 mber="5.1" targetptr="AnnotationViewerFigure"><ttl>
        Annotations produced by a statistical named entity tagger
-      </ttl><xreftext>Figure 5.4, “
+      </ttl><xreftext>Figure 5.1, “
        Annotations produced by a statistical named entity tagger
-      ”</xreftext></obj></div></div></div><div element="section" href="#cvd.mainDisplayArea" number="5.5" targetptr="cvd.mainDisplayArea"><ttl>The Main Display Area</ttl><xreftext>Section 5.5, “The Main Display Area”</xreftext><obj element="figure" href="#Main1Figure" number="5.5" targetptr="Main1Figure"><ttl>State of GUI after running an analysis engine</ttl><xreftext>Figure 5.5, “State of GUI after running an analysis engine”</xreftext></obj><obj element="figure" href="#Main2Figure" number="5.6" targetptr="Main2Figure"><ttl>
+      ”</xreftext></obj></div></div></div><div element="section" href="#cvd.mainDisplayArea" number="5.5" targetptr="cvd.mainDisplayArea"><ttl>The Main Display Area</ttl><xreftext>Section 5.5, “The Main Display Area”</xreftext><obj element="figure" href="#Main1Figure" number="5.2" targetptr="Main1Figure"><ttl>State of GUI after running an analysis engine</ttl><xreftext>Figure 5.2, “State of GUI after running an analysis engine”</xreftext></obj><obj element="figure" href="#Main2Figure" number="5.3" targetptr="Main2Figure"><ttl>
      Finding annotations for a specific location in the text
-    </ttl><xreftext>Figure 5.6, “
+    </ttl><xreftext>Figure 5.3, “
      Finding annotations for a specific location in the text
-    ”</xreftext></obj><obj element="figure" href="#Main3Figure" number="5.7" targetptr="Main3Figure"><ttl>
+    ”</xreftext></obj><obj element="figure" href="#Main3Figure" number="5.4" targetptr="Main3Figure"><ttl>
      Selecting an annotation from the context menu will highlight that
      annotation in the FS display
-    </ttl><xreftext>Figure 5.7, “
+    </ttl><xreftext>Figure 5.4, “
      Selecting an annotation from the context menu will highlight that
      annotation in the FS display
     ”</xreftext></obj><div element="section" href="#cvd.statusBar" number="5.5.1" targetptr="cvd.statusBar"><ttl>The Status Bar</ttl><xreftext>Section 5.5.1, “The Status Bar”</xreftext></div><div element="section" href="#cvd.keyboardNavigation" number="5.5.2" targetptr="cvd.keyboardNavigation"><ttl>Keyboard Navigation and Shortcuts</ttl><xreftext>Section 5.5.2, “Keyboard Navigation and Shortcuts”</xreftext><obj element="table" href="#cvd.table.keyboardShortcuts" number="5.1" targetptr="cvd.table.keyboardShortcuts"><ttl>Keyboard shortcuts</ttl><xreftext>Table 5.1, “Keyboard shortcuts”</xreftext></obj></div></div></div><div element="chapter" href="#ugr.tools.jcasgen" number="6" targetptr="ugr.tools.jcasgen"><ttl>JCasGen User's Guide</ttl><xreftext>Chapter 6, <i xmlns:xlink="http://www.w3.org/1999/xlink">JCasGen User's Guide</i></xreftext><div element="section" href="#ugr.tools.jcasgen.running_without_eclipse" number="6.1" targetpt
 r="ugr.tools.jcasgen.running_without_eclipse"><ttl>Running stand-alone without Eclipse</ttl><xreftext>Section 6.1, “Running stand-alone without Eclipse”</xreftext></div><div element="section" href="#ugr.tools.jcasgen.running_standalone_with_eclipse" number="6.2" targetptr="ugr.tools.jcasgen.running_standalone_with_eclipse"><ttl>Running stand-alone with Eclipse</ttl><xreftext>Section 6.2, “Running stand-alone with Eclipse”</xreftext></div><div element="section" href="#ugr.tools.jcasgen.running_within_eclipse" number="6.3" targetptr="ugr.tools.jcasgen.running_within_eclipse"><ttl>Running within Eclipse</ttl><xreftext>Section 6.3, “Running within Eclipse”</xreftext></div></div><div element="chapter" href="#ugr.tools.pear.packager" number="7" targetptr="ugr.tools.pear.packager"><ttl>PEAR Packager User's Guide</ttl><xreftext>Chapter 7, <i xmlns:xlink="http://www.w3.org/1999/xlink">PEAR Packager User's Guide</i></xreftext><div element="sec
 tion" href="#ugr.tools.pear.packager.using_eclipse_plugin" number="7.1" targetptr="ugr.tools.pear.packager.using_eclipse_plugin"><ttl>Using the PEAR Eclipse Plugin</ttl><xreftext>Section 7.1, “Using the PEAR Eclipse Plugin”</xreftext><div element="section" href="#ugr.tools.pear.packager.add_uima_nature" number="7.1.1" targetptr="ugr.tools.pear.packager.add_uima_nature"><ttl>Add UIMA Nature to your project</ttl><xreftext>Section 7.1.1, “Add UIMA Nature to your project”</xreftext><obj element="figure" href="#ugr.tools.pear.packager.fig.pear_structure" number="7.1" targetptr="ugr.tools.pear.packager.fig.pear_structure"><ttl>The Pear Structure</ttl><xreftext>Figure 7.1, “The Pear Structure”</xreftext></obj></div><div element="section" href="#ugr.tools.pear.packager.using_pear_generation_wizard" number="7.1.2" targetptr="ugr.tools.pear.packager.using_pear_generation_wizard"><ttl>Using the PEAR Generation Wizard</ttl><xreftext>Section 7.1.
 2, “Using the PEAR Generation Wizard”</xreftext><div element="section" href="#ugr.tools.pear.packager.wizard.component_information" number="7.1.2.1" targetptr="ugr.tools.pear.packager.wizard.component_information"><ttl>The Component Information page</ttl><xreftext>Section 7.1.2.1, “The Component Information page”</xreftext><obj element="figure" href="#ugr.tools.pear.packager.fig.wizard.component_information" number="7.2" targetptr="ugr.tools.pear.packager.fig.wizard.component_information"><ttl>The Component Information Page</ttl><xreftext>Figure 7.2, “The Component Information Page”</xreftext></obj></div><div element="section" href="#ugr.tools.pear.packager.wizard.install_environment" number="7.1.2.2" targetptr="ugr.tools.pear.packager.wizard.install_environment"><ttl>The Installation Environment page</ttl><xreftext>Section 7.1.2.2, “The Installation Environment page”</xreftext><obj element="figure" href="#ugr.tools.pear.packa
 ger.fig.wizard.install_environment" number="7.3" targetptr="ugr.tools.pear.packager.fig.wizard.install_environment"><ttl>The Installation Environment Page</ttl><xreftext>Figure 7.3, “The Installation Environment Page”</xreftext></obj></div><div element="section" href="#ugr.tools.pear.packager.wizard.file_content" number="7.1.2.3" targetptr="ugr.tools.pear.packager.wizard.file_content"><ttl>The PEAR file content page</ttl><xreftext>Section 7.1.2.3, “The PEAR file content page”</xreftext><obj element="figure" href="#ugr.tools.pear.packager.fig.wizard.export" number="7.4" targetptr="ugr.tools.pear.packager.fig.wizard.export"><ttl>The PEAR File Export Page</ttl><xreftext>Figure 7.4, “The PEAR File Export Page”</xreftext></obj></div></div></div><div element="section" href="#ugr.tools.pear.packager.using_command_line" number="7.2" targetptr="ugr.tools.pear.packager.using_command_line"><ttl>Using the PEAR command line packager</ttl><xreftext>S
 ection 7.2, “Using the PEAR command line packager”</xreftext></div></div><div element="chapter" href="#ugr.tools.pear.installer" number="8" targetptr="ugr.tools.pear.installer"><ttl>PEAR Installer User's Guide</ttl><xreftext>Chapter 8, <i xmlns:xlink="http://www.w3.org/1999/xlink">PEAR Installer User's Guide</i></xreftext></div><div element="chapter" href="#ugr.tools.pear.merger" number="9" targetptr="ugr.tools.pear.merger"><ttl>PEAR Merger User's Guide</ttl><xreftext>Chapter 9, <i xmlns:xlink="http://www.w3.org/1999/xlink">PEAR Merger User's Guide</i></xreftext><div element="section" href="#ugr.tools.pear.merger.merge_details" number="9.1" targetptr="ugr.tools.pear.merger.merge_details"><ttl>Details of the merging process</ttl><xreftext>Section 9.1, “Details of the merging process”</xreftext></div><div element="section" href="#ugr.tools.pear.merger.testing_modifying_resulting_pear" number="9.2" targetptr="ugr.tools.pear.merger.testing_modifyi
 ng_resulting_pear"><ttl>Testing and Modifying the resulting PEAR</ttl><xreftext>Section 9.2, “Testing and Modifying the resulting PEAR”</xreftext></div><div element="section" href="#ugr.tools.pear.merger.restrictions_limitations" number="9.3" targetptr="ugr.tools.pear.merger.restrictions_limitations"><ttl>Restrictions and Limitations</ttl><xreftext>Section 9.3, “Restrictions and Limitations”</xreftext></div></div></div>

Modified: incubator/uima/uimaj/trunk/uima-docbooks/src/olink/tools/pdf-target.db
URL: http://svn.apache.org/viewvc/incubator/uima/uimaj/trunk/uima-docbooks/src/olink/tools/pdf-target.db?view=diff&rev=555300&r1=555299&r2=555300
==============================================================================
--- incubator/uima/uimaj/trunk/uima-docbooks/src/olink/tools/pdf-target.db (original)
+++ incubator/uima/uimaj/trunk/uima-docbooks/src/olink/tools/pdf-target.db Wed Jul 11 08:23:58 2007
@@ -1,15 +1,15 @@
-<div element="book" href="#d0e2" number="" lang="en"><ttl>UIMA Tools Guide and Reference</ttl><xreftext>UIMA Tools Guide and Reference</xreftext><div element="chapter" href="#ugr.tools.cde" number="1" targetptr="ugr.tools.cde"><ttl>Component Descriptor Editor User's Guide</ttl><xreftext>Chapter 1, <fo:inline xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:xlink="http://www.w3.org/1999/xlink" font-style="italic">Component Descriptor Editor User's Guide</fo:inline></xreftext><div element="section" href="#ugr.tools.cde.launching" number="1.1" targetptr="ugr.tools.cde.launching"><ttl>Launching the Component Descriptor Editor</ttl><xreftext>Section 1.1, “Launching the Component Descriptor Editor”</xreftext></div><div element="section" href="#ugr.tools.cde.creating_new_ae_descriptor" number="1.2" targetptr="ugr.tools.cde.creating_new_ae_descriptor"><ttl>Creating a New AE Descriptor</ttl><xreftext>Section 1.2, “Creating a New AE Descriptor”</xreftext
 ></div><div element="section" href="#ugr.tools.cde.pages_within_the_editor" number="1.3" targetptr="ugr.tools.cde.pages_within_the_editor"><ttl>Pages within the Editor</ttl><xreftext>Section 1.3, “Pages within the Editor”</xreftext><div element="section" href="#ugr.tools.cde.adjusting_display_of_pages" number="1.3.1" targetptr="ugr.tools.cde.adjusting_display_of_pages"><ttl>Adjusting the display of pages</ttl><xreftext>Section 1.3.1, “Adjusting the display of pages”</xreftext></div></div><div element="section" href="#ugr.tools.cde.overview_page" number="1.4" targetptr="ugr.tools.cde.overview_page"><ttl>Overview Page</ttl><xreftext>Section 1.4, “Overview Page”</xreftext><div element="section" href="#ugr.tools.cde.overview_page.implementation_details" number="1.4.1" targetptr="ugr.tools.cde.overview_page.implementation_details"><ttl>Implementation Details</ttl><xreftext>Section 1.4.1, “Implementation Details”</xreftext></div>
 <div element="section" href="#ugr.tools.cde.overview_page.runtime_info" number="1.4.2" targetptr="ugr.tools.cde.overview_page.runtime_info"><ttl>Runtime Information</ttl><xreftext>Section 1.4.2, “Runtime Information”</xreftext></div><div element="section" href="#ugr.tools.cde.overview_page.overall_id_info" number="1.4.3" targetptr="ugr.tools.cde.overview_page.overall_id_info"><ttl>Overall Identification Information</ttl><xreftext>Section 1.4.3, “Overall Identification Information”</xreftext></div></div><div element="section" href="#ugr.tools.cde.aggregate_page" number="1.5" targetptr="ugr.tools.cde.aggregate_page"><ttl>Aggregate Page</ttl><xreftext>Section 1.5, “Aggregate Page”</xreftext><div element="section" href="#ugr.tools.cde.aggregate_page.adding_components_more_than_once" number="1.5.1" targetptr="ugr.tools.cde.aggregate_page.adding_components_more_than_once"><ttl>Adding components more than once</ttl><xreftext>Section 1.5.1, 
 “Adding components more than once”</xreftext></div><div element="section" href="#ugr.tools.cde.aggregate_page.adding_removing_components_from_flow" number="1.5.2" targetptr="ugr.tools.cde.aggregate_page.adding_removing_components_from_flow"><ttl>Adding or Removing components in a flow</ttl><xreftext>Section 1.5.2, “Adding or Removing components in a flow”</xreftext></div><div element="section" href="#ugr.tools.cde.aggregate_page.adding_remote_aes" number="1.5.3" targetptr="ugr.tools.cde.aggregate_page.adding_remote_aes"><ttl>Adding remote Analysis Engines</ttl><xreftext>Section 1.5.3, “Adding remote Analysis Engines”</xreftext></div><div element="section" href="#ugr.tools.cde.aggregate_page.connecting_to_remote_services" number="1.5.4" targetptr="ugr.tools.cde.aggregate_page.connecting_to_remote_services"><ttl>Connecting to Remote Services</ttl><xreftext>Section 1.5.4, “Connecting to Remote Services”</xreftext></div><div eleme
 nt="section" href="#ugr.tools.cde.aggregate_page.finding_aes_by_searching" number="1.5.5" targetptr="ugr.tools.cde.aggregate_page.finding_aes_by_searching"><ttl>Finding Analysis Engines by searching</ttl><xreftext>Section 1.5.5, “Finding Analysis Engines by searching”</xreftext></div><div element="section" href="#ugr.tools.cde.aggregate_page.component_engine_flow" number="1.5.6" targetptr="ugr.tools.cde.aggregate_page.component_engine_flow"><ttl>Component Engine Flow</ttl><xreftext>Section 1.5.6, “Component Engine Flow”</xreftext></div></div><div element="section" href="#ugr.tools.cde.parm_definition" number="1.6" targetptr="ugr.tools.cde.parm_definition"><ttl>Parameters Definition Page</ttl><xreftext>Section 1.6, “Parameters Definition Page”</xreftext><div element="section" href="#ugr.tools.cde.parm_definition.using_groups" number="1.6.1" targetptr="ugr.tools.cde.parm_definition.using_groups"><ttl>Using groups</ttl><xreftext>SectionÂ�
 �1.6.1, “Using groups”</xreftext></div><div element="section" href="#ugr.tools.cde.parm_definition.aggregates" number="1.6.2" targetptr="ugr.tools.cde.parm_definition.aggregates"><ttl>Parameter declarations for Aggregates</ttl><xreftext>Section 1.6.2, “Parameter declarations for Aggregates”</xreftext><obj element="phrase" href="#ugr.tools.cde.parm_definition.removing_groups" number="" targetptr="ugr.tools.cde.parm_definition.removing_groups"><ttl>???TITLE???</ttl><xreftext/></obj></div></div><div element="section" href="#ugr.tools.cde.parameter_settings" number="1.7" targetptr="ugr.tools.cde.parameter_settings"><ttl>Parameter Settings Page</ttl><xreftext>Section 1.7, “Parameter Settings Page”</xreftext></div><div element="section" href="#ugr.tools.cde.type_system" number="1.8" targetptr="ugr.tools.cde.type_system"><ttl>Type System Page</ttl><xreftext>Section 1.8, “Type System Page”</xreftext><obj element="para" href="#ugr.tool
 s.cde.auto_jcasgen" number="" targetptr="ugr.tools.cde.auto_jcasgen"><ttl>???TITLE???</ttl><xreftext>Section 1.8, “Type System Page”</xreftext></obj><div element="section" href="#ugr.tools.cde.type_system.exporting" number="1.8.1" targetptr="ugr.tools.cde.type_system.exporting"><ttl>Exporting</ttl><xreftext>Section 1.8.1, “Exporting”</xreftext></div></div><div element="section" href="#ugr.tools.cde.capabilities" number="1.9" targetptr="ugr.tools.cde.capabilities"><ttl>Capabilities Page</ttl><xreftext>Section 1.9, “Capabilities Page”</xreftext><div element="section" href="#ugr.tools.cde.capabilities.sofa_name_mapping" number="1.9.1" targetptr="ugr.tools.cde.capabilities.sofa_name_mapping"><ttl>Sofa (and view) name mappings</ttl><xreftext>Section 1.9.1, “Sofa (and view) name mappings”</xreftext></div></div><div element="section" href="#ugr.tools.cde.indexes" number="1.10" targetptr="ugr.tools.cde.indexes"><ttl>Indexes Page</t
 tl><xreftext>Section 1.10, “Indexes Page”</xreftext></div><div element="section" href="#ugr.tools.cde.resources" number="1.11" targetptr="ugr.tools.cde.resources"><ttl>Resources Page</ttl><xreftext>Section 1.11, “Resources Page”</xreftext><div element="section" href="#ugr.tools.cde.resources.binding" number="1.11.1" targetptr="ugr.tools.cde.resources.binding"><ttl>Binding</ttl><xreftext>Section 1.11.1, “Binding”</xreftext></div><div element="section" href="#ugr.tools.cde.resources.aggregates" number="1.11.2" targetptr="ugr.tools.cde.resources.aggregates"><ttl>Resources with Aggregates</ttl><xreftext>Section 1.11.2, “Resources with Aggregates”</xreftext></div><div element="section" href="#ugr.tools.cde.resources.imports_exports" number="1.11.3" targetptr="ugr.tools.cde.resources.imports_exports"><ttl>Imports and Exports</ttl><xreftext>Section 1.11.3, “Imports and Exports”</xreftext></div></div><div element="sect
 ion" href="#ugr.tools.cde.source" number="1.12" targetptr="ugr.tools.cde.source"><ttl>Source Page</ttl><xreftext>Section 1.12, “Source Page”</xreftext><div element="section" href="#ugr.tools.cde.source.formatting" number="1.12.1" targetptr="ugr.tools.cde.source.formatting"><ttl>Source formatting – indentation</ttl><xreftext>Section 1.12.1, “Source formatting – indentation”</xreftext></div></div><div element="section" href="#ugr.tools.cde.creating_self_contained_type_system" number="1.13" targetptr="ugr.tools.cde.creating_self_contained_type_system"><ttl>Creating a Self-Contained Type System</ttl><xreftext>Section 1.13, “Creating a Self-Contained Type System”</xreftext></div><div element="section" href="#ugr.tools.cde.creating_other_descriptor_components" number="1.14" targetptr="ugr.tools.cde.creating_other_descriptor_components"><ttl>Creating Other Descriptor Components</ttl><xreftext>Section 1.14, “Creating Other Des
 criptor Components”</xreftext></div></div><div element="chapter" href="#ugr.tools.cpe" number="2" targetptr="ugr.tools.cpe"><ttl>Collection Processing Engine Configurator User's Guide</ttl><xreftext>Chapter 2, <fo:inline xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:xlink="http://www.w3.org/1999/xlink" font-style="italic">Collection Processing Engine Configurator User's Guide</fo:inline></xreftext><div element="section" href="#ugr.tools.cpe.limitations" number="2.1" targetptr="ugr.tools.cpe.limitations"><ttl>Limitations of the CPE Configurator</ttl><xreftext>Section 2.1, “Limitations of the CPE Configurator”</xreftext></div><div element="section" href="#ugr.tools.cpe.starting" number="2.2" targetptr="ugr.tools.cpe.starting"><ttl>Starting the CPE Configurator</ttl><xreftext>Section 2.2, “Starting the CPE Configurator”</xreftext></div><div element="section" href="#ugr.tools.cpe.selecting_component_descriptors" number="2.3" targetptr="ugr.
 tools.cpe.selecting_component_descriptors"><ttl>Selecting Component Descriptors</ttl><xreftext>Section 2.3, “Selecting Component Descriptors”</xreftext></div><div element="section" href="#ugr.tools.cpe.running" number="2.4" targetptr="ugr.tools.cpe.running"><ttl>Running a Collection Processing Engine</ttl><xreftext>Section 2.4, “Running a Collection Processing Engine”</xreftext></div><div element="section" href="#ugr.tools.cpe.file_menu" number="2.5" targetptr="ugr.tools.cpe.file_menu"><ttl>The File Menu</ttl><xreftext>Section 2.5, “The File Menu”</xreftext></div><div element="section" href="#ugr.tools.cpe.help_menu" number="2.6" targetptr="ugr.tools.cpe.help_menu"><ttl>The Help Menu</ttl><xreftext>Section 2.6, “The Help Menu”</xreftext></div></div><div element="chapter" href="#ugr.tools.doc_analyzer" number="3" targetptr="ugr.tools.doc_analyzer"><ttl>Document Analyzer User's Guide</ttl><xreftext>Chapter 3, <fo:inline xm
 lns:fo="http://www.w3.org/1999/XSL/Format" xmlns:xlink="http://www.w3.org/1999/xlink" font-style="italic">Document Analyzer User's Guide</fo:inline></xreftext><div element="section" href="#ugr.tools.doc_analyzer.starting" number="3.1" targetptr="ugr.tools.doc_analyzer.starting"><ttl>Starting the Document Analyzer</ttl><xreftext>Section 3.1, “Starting the Document Analyzer”</xreftext></div><div element="section" href="#ugr.tools.doc_analyzer.running_an_ae" number="3.2" targetptr="ugr.tools.doc_analyzer.running_an_ae"><ttl>Running an AE</ttl><xreftext>Section 3.2, “Running an AE”</xreftext></div><div element="section" href="#ugr.tools.doc_analyzer.viewing_results" number="3.3" targetptr="ugr.tools.doc_analyzer.viewing_results"><ttl>Viewing the Analysis Results</ttl><xreftext>Section 3.3, “Viewing the Analysis Results”</xreftext></div><div element="section" href="#ugr.tools.doc_analyzer.configuring" number="3.4" targetptr="ugr.tools.doc_an
 alyzer.configuring"><ttl>Configuring the Annotation Viewer</ttl><xreftext>Section 3.4, “Configuring the Annotation Viewer”</xreftext></div><div element="section" href="#ugr.tools.doc_analyzer.interactive_mode" number="3.5" targetptr="ugr.tools.doc_analyzer.interactive_mode"><ttl>Interactive Mode</ttl><xreftext>Section 3.5, “Interactive Mode”</xreftext></div><div element="section" href="#ugr.tools.doc_analyzer.view_mode" number="3.6" targetptr="ugr.tools.doc_analyzer.view_mode"><ttl>View Mode</ttl><xreftext>Section 3.6, “View Mode”</xreftext></div></div><div element="chapter" href="#ugr.tools.annotation_viewer" number="4" targetptr="ugr.tools.annotation_viewer"><ttl>Annotation Viewer</ttl><xreftext>Chapter 4, <fo:inline xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:xlink="http://www.w3.org/1999/xlink" font-style="italic">Annotation Viewer</fo:inline></xreftext></div><div element="chapter" href="#ugr.tools.cvd" number="5" targetpt
 r="ugr.tools.cvd"><ttl>CAS Visual Debugger</ttl><xreftext>Chapter 5, <fo:inline xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:xlink="http://www.w3.org/1999/xlink" font-style="italic">CAS Visual Debugger</fo:inline></xreftext><div element="section" href="#ugr.tools.cvd.introduction" number="5.1" targetptr="ugr.tools.cvd.introduction"><ttl>Introduction</ttl><xreftext>Section 5.1, “Introduction”</xreftext><div element="section" href="#ugr.cvd.introduction.running" number="5.1.1" targetptr="ugr.cvd.introduction.running"><ttl>Running CVD</ttl><xreftext>Section 5.1.1, “Running CVD”</xreftext></div></div><div element="section" href="#cvd.errorHandling" number="5.2" targetptr="cvd.errorHandling"><ttl>Error Handling</ttl><xreftext>Section 5.2, “Error Handling”</xreftext></div><div element="section" href="#cvd.preferencesFile" number="5.3" targetptr="cvd.preferencesFile"><ttl>Preferences File</ttl><xreftext>Section 5.3, “Preferenc
 es File”</xreftext></div><div element="section" href="#cvd.theMenus" number="5.4" targetptr="cvd.theMenus"><ttl>The Menus</ttl><xreftext>Section 5.4, “The Menus”</xreftext><div element="section" href="#cvd.fileMenu" number="5.4.1" targetptr="cvd.fileMenu"><ttl>The File Menu</ttl><xreftext>Section 5.4.1, “The File Menu”</xreftext></div><div element="section" href="#cvd.editMenu" number="5.4.2" targetptr="cvd.editMenu"><ttl>The Edit Menu</ttl><xreftext>Section 5.4.2, “The Edit Menu”</xreftext><obj element="figure" href="#cvd.figure.editMenu" number="5.1" targetptr="cvd.figure.editMenu"><ttl>The Edit menu</ttl><xreftext>Figure 5.1, “The Edit menu”</xreftext></obj></div><div element="section" href="#cvd.runMenu" number="5.4.3" targetptr="cvd.runMenu"><ttl>The Run Menu</ttl><xreftext>Section 5.4.3, “The Run Menu”</xreftext><obj element="figure" href="#cvd.figure.runMenu" number="5.2" targetptr="cvd.figure.runMe
 nu"><ttl>The Run menu</ttl><xreftext>Figure 5.2, “The Run menu”</xreftext></obj></div><div element="section" href="#cvd.toolsMenu" number="5.4.4" targetptr="cvd.toolsMenu"><ttl>The tools menu</ttl><xreftext>Section 5.4.4, “The tools menu”</xreftext><div element="section" href="#cvd.viewTypeSystem" number="5.4.4.1" targetptr="cvd.viewTypeSystem"><ttl>View Type System</ttl><xreftext>Section 5.4.4.1, “View Type System”</xreftext><obj element="figure" href="#cvd.figure.typeSystemViewer" number="5.3" targetptr="cvd.figure.typeSystemViewer"><ttl>The type system viewer</ttl><xreftext>Figure 5.3, “The type system viewer”</xreftext></obj></div><div element="section" href="#cvd.showSelectedAnnotations" number="5.4.4.2" targetptr="cvd.showSelectedAnnotations"><ttl>Show Selected Annotations</ttl><xreftext>Section 5.4.4.2, “Show Selected Annotations”</xreftext><obj element="figure" href="#AnnotationViewerFigure" number="5.4
 " targetptr="AnnotationViewerFigure"><ttl>
+<div element="book" href="#d0e2" number="" lang="en"><ttl>UIMA Tools Guide and Reference</ttl><xreftext>UIMA Tools Guide and Reference</xreftext><div element="chapter" href="#ugr.tools.cde" number="1" targetptr="ugr.tools.cde"><ttl>Component Descriptor Editor User's Guide</ttl><xreftext>Chapter 1, <fo:inline xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:xlink="http://www.w3.org/1999/xlink" font-style="italic">Component Descriptor Editor User's Guide</fo:inline></xreftext><div element="section" href="#ugr.tools.cde.launching" number="1.1" targetptr="ugr.tools.cde.launching"><ttl>Launching the Component Descriptor Editor</ttl><xreftext>Section 1.1, “Launching the Component Descriptor Editor”</xreftext></div><div element="section" href="#ugr.tools.cde.creating_new_ae_descriptor" number="1.2" targetptr="ugr.tools.cde.creating_new_ae_descriptor"><ttl>Creating a New AE Descriptor</ttl><xreftext>Section 1.2, “Creating a New AE Descriptor”</xreftext
 ></div><div element="section" href="#ugr.tools.cde.pages_within_the_editor" number="1.3" targetptr="ugr.tools.cde.pages_within_the_editor"><ttl>Pages within the Editor</ttl><xreftext>Section 1.3, “Pages within the Editor”</xreftext><div element="section" href="#ugr.tools.cde.adjusting_display_of_pages" number="1.3.1" targetptr="ugr.tools.cde.adjusting_display_of_pages"><ttl>Adjusting the display of pages</ttl><xreftext>Section 1.3.1, “Adjusting the display of pages”</xreftext></div></div><div element="section" href="#ugr.tools.cde.overview_page" number="1.4" targetptr="ugr.tools.cde.overview_page"><ttl>Overview Page</ttl><xreftext>Section 1.4, “Overview Page”</xreftext><div element="section" href="#ugr.tools.cde.overview_page.implementation_details" number="1.4.1" targetptr="ugr.tools.cde.overview_page.implementation_details"><ttl>Implementation Details</ttl><xreftext>Section 1.4.1, “Implementation Details”</xreftext></div>
 <div element="section" href="#ugr.tools.cde.overview_page.runtime_info" number="1.4.2" targetptr="ugr.tools.cde.overview_page.runtime_info"><ttl>Runtime Information</ttl><xreftext>Section 1.4.2, “Runtime Information”</xreftext></div><div element="section" href="#ugr.tools.cde.overview_page.overall_id_info" number="1.4.3" targetptr="ugr.tools.cde.overview_page.overall_id_info"><ttl>Overall Identification Information</ttl><xreftext>Section 1.4.3, “Overall Identification Information”</xreftext></div></div><div element="section" href="#ugr.tools.cde.aggregate_page" number="1.5" targetptr="ugr.tools.cde.aggregate_page"><ttl>Aggregate Page</ttl><xreftext>Section 1.5, “Aggregate Page”</xreftext><div element="section" href="#ugr.tools.cde.aggregate_page.adding_components_more_than_once" number="1.5.1" targetptr="ugr.tools.cde.aggregate_page.adding_components_more_than_once"><ttl>Adding components more than once</ttl><xreftext>Section 1.5.1, 
 “Adding components more than once”</xreftext></div><div element="section" href="#ugr.tools.cde.aggregate_page.adding_removing_components_from_flow" number="1.5.2" targetptr="ugr.tools.cde.aggregate_page.adding_removing_components_from_flow"><ttl>Adding or Removing components in a flow</ttl><xreftext>Section 1.5.2, “Adding or Removing components in a flow”</xreftext></div><div element="section" href="#ugr.tools.cde.aggregate_page.adding_remote_aes" number="1.5.3" targetptr="ugr.tools.cde.aggregate_page.adding_remote_aes"><ttl>Adding remote Analysis Engines</ttl><xreftext>Section 1.5.3, “Adding remote Analysis Engines”</xreftext></div><div element="section" href="#ugr.tools.cde.aggregate_page.connecting_to_remote_services" number="1.5.4" targetptr="ugr.tools.cde.aggregate_page.connecting_to_remote_services"><ttl>Connecting to Remote Services</ttl><xreftext>Section 1.5.4, “Connecting to Remote Services”</xreftext></div><div eleme
 nt="section" href="#ugr.tools.cde.aggregate_page.finding_aes_by_searching" number="1.5.5" targetptr="ugr.tools.cde.aggregate_page.finding_aes_by_searching"><ttl>Finding Analysis Engines by searching</ttl><xreftext>Section 1.5.5, “Finding Analysis Engines by searching”</xreftext></div><div element="section" href="#ugr.tools.cde.aggregate_page.component_engine_flow" number="1.5.6" targetptr="ugr.tools.cde.aggregate_page.component_engine_flow"><ttl>Component Engine Flow</ttl><xreftext>Section 1.5.6, “Component Engine Flow”</xreftext></div></div><div element="section" href="#ugr.tools.cde.parm_definition" number="1.6" targetptr="ugr.tools.cde.parm_definition"><ttl>Parameters Definition Page</ttl><xreftext>Section 1.6, “Parameters Definition Page”</xreftext><div element="section" href="#ugr.tools.cde.parm_definition.using_groups" number="1.6.1" targetptr="ugr.tools.cde.parm_definition.using_groups"><ttl>Using groups</ttl><xreftext>SectionÂ�
 �1.6.1, “Using groups”</xreftext></div><div element="section" href="#ugr.tools.cde.parm_definition.aggregates" number="1.6.2" targetptr="ugr.tools.cde.parm_definition.aggregates"><ttl>Parameter declarations for Aggregates</ttl><xreftext>Section 1.6.2, “Parameter declarations for Aggregates”</xreftext><obj element="phrase" href="#ugr.tools.cde.parm_definition.removing_groups" number="" targetptr="ugr.tools.cde.parm_definition.removing_groups"><ttl>???TITLE???</ttl><xreftext/></obj></div></div><div element="section" href="#ugr.tools.cde.parameter_settings" number="1.7" targetptr="ugr.tools.cde.parameter_settings"><ttl>Parameter Settings Page</ttl><xreftext>Section 1.7, “Parameter Settings Page”</xreftext></div><div element="section" href="#ugr.tools.cde.type_system" number="1.8" targetptr="ugr.tools.cde.type_system"><ttl>Type System Page</ttl><xreftext>Section 1.8, “Type System Page”</xreftext><obj element="para" href="#ugr.tool
 s.cde.auto_jcasgen" number="" targetptr="ugr.tools.cde.auto_jcasgen"><ttl>???TITLE???</ttl><xreftext>Section 1.8, “Type System Page”</xreftext></obj><div element="section" href="#ugr.tools.cde.type_system.exporting" number="1.8.1" targetptr="ugr.tools.cde.type_system.exporting"><ttl>Exporting</ttl><xreftext>Section 1.8.1, “Exporting”</xreftext></div></div><div element="section" href="#ugr.tools.cde.capabilities" number="1.9" targetptr="ugr.tools.cde.capabilities"><ttl>Capabilities Page</ttl><xreftext>Section 1.9, “Capabilities Page”</xreftext><div element="section" href="#ugr.tools.cde.capabilities.sofa_name_mapping" number="1.9.1" targetptr="ugr.tools.cde.capabilities.sofa_name_mapping"><ttl>Sofa (and view) name mappings</ttl><xreftext>Section 1.9.1, “Sofa (and view) name mappings”</xreftext></div></div><div element="section" href="#ugr.tools.cde.indexes" number="1.10" targetptr="ugr.tools.cde.indexes"><ttl>Indexes Page</t
 tl><xreftext>Section 1.10, “Indexes Page”</xreftext></div><div element="section" href="#ugr.tools.cde.resources" number="1.11" targetptr="ugr.tools.cde.resources"><ttl>Resources Page</ttl><xreftext>Section 1.11, “Resources Page”</xreftext><div element="section" href="#ugr.tools.cde.resources.binding" number="1.11.1" targetptr="ugr.tools.cde.resources.binding"><ttl>Binding</ttl><xreftext>Section 1.11.1, “Binding”</xreftext></div><div element="section" href="#ugr.tools.cde.resources.aggregates" number="1.11.2" targetptr="ugr.tools.cde.resources.aggregates"><ttl>Resources with Aggregates</ttl><xreftext>Section 1.11.2, “Resources with Aggregates”</xreftext></div><div element="section" href="#ugr.tools.cde.resources.imports_exports" number="1.11.3" targetptr="ugr.tools.cde.resources.imports_exports"><ttl>Imports and Exports</ttl><xreftext>Section 1.11.3, “Imports and Exports”</xreftext></div></div><div element="sect
 ion" href="#ugr.tools.cde.source" number="1.12" targetptr="ugr.tools.cde.source"><ttl>Source Page</ttl><xreftext>Section 1.12, “Source Page”</xreftext><div element="section" href="#ugr.tools.cde.source.formatting" number="1.12.1" targetptr="ugr.tools.cde.source.formatting"><ttl>Source formatting – indentation</ttl><xreftext>Section 1.12.1, “Source formatting – indentation”</xreftext></div></div><div element="section" href="#ugr.tools.cde.creating_self_contained_type_system" number="1.13" targetptr="ugr.tools.cde.creating_self_contained_type_system"><ttl>Creating a Self-Contained Type System</ttl><xreftext>Section 1.13, “Creating a Self-Contained Type System”</xreftext></div><div element="section" href="#ugr.tools.cde.creating_other_descriptor_components" number="1.14" targetptr="ugr.tools.cde.creating_other_descriptor_components"><ttl>Creating Other Descriptor Components</ttl><xreftext>Section 1.14, “Creating Other Des
 criptor Components”</xreftext></div></div><div element="chapter" href="#ugr.tools.cpe" number="2" targetptr="ugr.tools.cpe"><ttl>Collection Processing Engine Configurator User's Guide</ttl><xreftext>Chapter 2, <fo:inline xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:xlink="http://www.w3.org/1999/xlink" font-style="italic">Collection Processing Engine Configurator User's Guide</fo:inline></xreftext><div element="section" href="#ugr.tools.cpe.limitations" number="2.1" targetptr="ugr.tools.cpe.limitations"><ttl>Limitations of the CPE Configurator</ttl><xreftext>Section 2.1, “Limitations of the CPE Configurator”</xreftext></div><div element="section" href="#ugr.tools.cpe.starting" number="2.2" targetptr="ugr.tools.cpe.starting"><ttl>Starting the CPE Configurator</ttl><xreftext>Section 2.2, “Starting the CPE Configurator”</xreftext></div><div element="section" href="#ugr.tools.cpe.selecting_component_descriptors" number="2.3" targetptr="ugr.
 tools.cpe.selecting_component_descriptors"><ttl>Selecting Component Descriptors</ttl><xreftext>Section 2.3, “Selecting Component Descriptors”</xreftext></div><div element="section" href="#ugr.tools.cpe.running" number="2.4" targetptr="ugr.tools.cpe.running"><ttl>Running a Collection Processing Engine</ttl><xreftext>Section 2.4, “Running a Collection Processing Engine”</xreftext></div><div element="section" href="#ugr.tools.cpe.file_menu" number="2.5" targetptr="ugr.tools.cpe.file_menu"><ttl>The File Menu</ttl><xreftext>Section 2.5, “The File Menu”</xreftext></div><div element="section" href="#ugr.tools.cpe.help_menu" number="2.6" targetptr="ugr.tools.cpe.help_menu"><ttl>The Help Menu</ttl><xreftext>Section 2.6, “The Help Menu”</xreftext></div></div><div element="chapter" href="#ugr.tools.doc_analyzer" number="3" targetptr="ugr.tools.doc_analyzer"><ttl>Document Analyzer User's Guide</ttl><xreftext>Chapter 3, <fo:inline xm
 lns:fo="http://www.w3.org/1999/XSL/Format" xmlns:xlink="http://www.w3.org/1999/xlink" font-style="italic">Document Analyzer User's Guide</fo:inline></xreftext><div element="section" href="#ugr.tools.doc_analyzer.starting" number="3.1" targetptr="ugr.tools.doc_analyzer.starting"><ttl>Starting the Document Analyzer</ttl><xreftext>Section 3.1, “Starting the Document Analyzer”</xreftext></div><div element="section" href="#ugr.tools.doc_analyzer.running_an_ae" number="3.2" targetptr="ugr.tools.doc_analyzer.running_an_ae"><ttl>Running an AE</ttl><xreftext>Section 3.2, “Running an AE”</xreftext></div><div element="section" href="#ugr.tools.doc_analyzer.viewing_results" number="3.3" targetptr="ugr.tools.doc_analyzer.viewing_results"><ttl>Viewing the Analysis Results</ttl><xreftext>Section 3.3, “Viewing the Analysis Results”</xreftext></div><div element="section" href="#ugr.tools.doc_analyzer.configuring" number="3.4" targetptr="ugr.tools.doc_an
 alyzer.configuring"><ttl>Configuring the Annotation Viewer</ttl><xreftext>Section 3.4, “Configuring the Annotation Viewer”</xreftext></div><div element="section" href="#ugr.tools.doc_analyzer.interactive_mode" number="3.5" targetptr="ugr.tools.doc_analyzer.interactive_mode"><ttl>Interactive Mode</ttl><xreftext>Section 3.5, “Interactive Mode”</xreftext></div><div element="section" href="#ugr.tools.doc_analyzer.view_mode" number="3.6" targetptr="ugr.tools.doc_analyzer.view_mode"><ttl>View Mode</ttl><xreftext>Section 3.6, “View Mode”</xreftext></div></div><div element="chapter" href="#ugr.tools.annotation_viewer" number="4" targetptr="ugr.tools.annotation_viewer"><ttl>Annotation Viewer</ttl><xreftext>Chapter 4, <fo:inline xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:xlink="http://www.w3.org/1999/xlink" font-style="italic">Annotation Viewer</fo:inline></xreftext></div><div element="chapter" href="#ugr.tools.cvd" number="5" targetpt
 r="ugr.tools.cvd"><ttl>CAS Visual Debugger</ttl><xreftext>Chapter 5, <fo:inline xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:xlink="http://www.w3.org/1999/xlink" font-style="italic">CAS Visual Debugger</fo:inline></xreftext><div element="section" href="#ugr.tools.cvd.introduction" number="5.1" targetptr="ugr.tools.cvd.introduction"><ttl>Introduction</ttl><xreftext>Section 5.1, “Introduction”</xreftext><div element="section" href="#ugr.cvd.introduction.running" number="5.1.1" targetptr="ugr.cvd.introduction.running"><ttl>Running CVD</ttl><xreftext>Section 5.1.1, “Running CVD”</xreftext></div></div><div element="section" href="#cvd.errorHandling" number="5.2" targetptr="cvd.errorHandling"><ttl>Error Handling</ttl><xreftext>Section 5.2, “Error Handling”</xreftext></div><div element="section" href="#cvd.preferencesFile" number="5.3" targetptr="cvd.preferencesFile"><ttl>Preferences File</ttl><xreftext>Section 5.3, “Preferenc
 es File”</xreftext></div><div element="section" href="#cvd.theMenus" number="5.4" targetptr="cvd.theMenus"><ttl>The Menus</ttl><xreftext>Section 5.4, “The Menus”</xreftext><div element="section" href="#cvd.fileMenu" number="5.4.1" targetptr="cvd.fileMenu"><ttl>The File Menu</ttl><xreftext>Section 5.4.1, “The File Menu”</xreftext></div><div element="section" href="#cvd.editMenu" number="5.4.2" targetptr="cvd.editMenu"><ttl>The Edit Menu</ttl><xreftext>Section 5.4.2, “The Edit Menu”</xreftext></div><div element="section" href="#cvd.runMenu" number="5.4.3" targetptr="cvd.runMenu"><ttl>The Run Menu</ttl><xreftext>Section 5.4.3, “The Run Menu”</xreftext></div><div element="section" href="#cvd.toolsMenu" number="5.4.4" targetptr="cvd.toolsMenu"><ttl>The tools menu</ttl><xreftext>Section 5.4.4, “The tools menu”</xreftext><div element="section" href="#cvd.viewTypeSystem" number="5.4.4.1" targetptr="cvd.viewTypeSys
 tem"><ttl>View Type System</ttl><xreftext>Section 5.4.4.1, “View Type System”</xreftext></div><div element="section" href="#cvd.showSelectedAnnotations" number="5.4.4.2" targetptr="cvd.showSelectedAnnotations"><ttl>Show Selected Annotations</ttl><xreftext>Section 5.4.4.2, “Show Selected Annotations”</xreftext><obj element="figure" href="#AnnotationViewerFigure" number="5.1" targetptr="AnnotationViewerFigure"><ttl>
        Annotations produced by a statistical named entity tagger
-      </ttl><xreftext>Figure 5.4, “
+      </ttl><xreftext>Figure 5.1, “
        Annotations produced by a statistical named entity tagger
-      ”</xreftext></obj></div></div></div><div element="section" href="#cvd.mainDisplayArea" number="5.5" targetptr="cvd.mainDisplayArea"><ttl>The Main Display Area</ttl><xreftext>Section 5.5, “The Main Display Area”</xreftext><obj element="figure" href="#Main1Figure" number="5.5" targetptr="Main1Figure"><ttl>State of GUI after running an analysis engine</ttl><xreftext>Figure 5.5, “State of GUI after running an analysis engine”</xreftext></obj><obj element="figure" href="#Main2Figure" number="5.6" targetptr="Main2Figure"><ttl>
+      ”</xreftext></obj></div></div></div><div element="section" href="#cvd.mainDisplayArea" number="5.5" targetptr="cvd.mainDisplayArea"><ttl>The Main Display Area</ttl><xreftext>Section 5.5, “The Main Display Area”</xreftext><obj element="figure" href="#Main1Figure" number="5.2" targetptr="Main1Figure"><ttl>State of GUI after running an analysis engine</ttl><xreftext>Figure 5.2, “State of GUI after running an analysis engine”</xreftext></obj><obj element="figure" href="#Main2Figure" number="5.3" targetptr="Main2Figure"><ttl>
      Finding annotations for a specific location in the text
-    </ttl><xreftext>Figure 5.6, “
+    </ttl><xreftext>Figure 5.3, “
      Finding annotations for a specific location in the text
-    ”</xreftext></obj><obj element="figure" href="#Main3Figure" number="5.7" targetptr="Main3Figure"><ttl>
+    ”</xreftext></obj><obj element="figure" href="#Main3Figure" number="5.4" targetptr="Main3Figure"><ttl>
      Selecting an annotation from the context menu will highlight that
      annotation in the FS display
-    </ttl><xreftext>Figure 5.7, “
+    </ttl><xreftext>Figure 5.4, “
      Selecting an annotation from the context menu will highlight that
      annotation in the FS display
     ”</xreftext></obj><div element="section" href="#cvd.statusBar" number="5.5.1" targetptr="cvd.statusBar"><ttl>The Status Bar</ttl><xreftext>Section 5.5.1, “The Status Bar”</xreftext></div><div element="section" href="#cvd.keyboardNavigation" number="5.5.2" targetptr="cvd.keyboardNavigation"><ttl>Keyboard Navigation and Shortcuts</ttl><xreftext>Section 5.5.2, “Keyboard Navigation and Shortcuts”</xreftext><obj element="table" href="#cvd.table.keyboardShortcuts" number="5.1" targetptr="cvd.table.keyboardShortcuts"><ttl>Keyboard shortcuts</ttl><xreftext>Table 5.1, “Keyboard shortcuts”</xreftext></obj></div></div></div><div element="chapter" href="#ugr.tools.jcasgen" number="6" targetptr="ugr.tools.jcasgen"><ttl>JCasGen User's Guide</ttl><xreftext>Chapter 6, <fo:inline xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:xlink="http://www.w3.org/1999/xlink" font-style="italic">JCasGen User's Guide</fo:inline></xreftext><div element=
 "section" href="#ugr.tools.jcasgen.running_without_eclipse" number="6.1" targetptr="ugr.tools.jcasgen.running_without_eclipse"><ttl>Running stand-alone without Eclipse</ttl><xreftext>Section 6.1, “Running stand-alone without Eclipse”</xreftext></div><div element="section" href="#ugr.tools.jcasgen.running_standalone_with_eclipse" number="6.2" targetptr="ugr.tools.jcasgen.running_standalone_with_eclipse"><ttl>Running stand-alone with Eclipse</ttl><xreftext>Section 6.2, “Running stand-alone with Eclipse”</xreftext></div><div element="section" href="#ugr.tools.jcasgen.running_within_eclipse" number="6.3" targetptr="ugr.tools.jcasgen.running_within_eclipse"><ttl>Running within Eclipse</ttl><xreftext>Section 6.3, “Running within Eclipse”</xreftext></div></div><div element="chapter" href="#ugr.tools.pear.packager" number="7" targetptr="ugr.tools.pear.packager"><ttl>PEAR Packager User's Guide</ttl><xreftext>Chapter 7, <fo:inline xmlns:fo="ht
 tp://www.w3.org/1999/XSL/Format" xmlns:xlink="http://www.w3.org/1999/xlink" font-style="italic">PEAR Packager User's Guide</fo:inline></xreftext><div element="section" href="#ugr.tools.pear.packager.using_eclipse_plugin" number="7.1" targetptr="ugr.tools.pear.packager.using_eclipse_plugin"><ttl>Using the PEAR Eclipse Plugin</ttl><xreftext>Section 7.1, “Using the PEAR Eclipse Plugin”</xreftext><div element="section" href="#ugr.tools.pear.packager.add_uima_nature" number="7.1.1" targetptr="ugr.tools.pear.packager.add_uima_nature"><ttl>Add UIMA Nature to your project</ttl><xreftext>Section 7.1.1, “Add UIMA Nature to your project”</xreftext><obj element="figure" href="#ugr.tools.pear.packager.fig.pear_structure" number="7.1" targetptr="ugr.tools.pear.packager.fig.pear_structure"><ttl>The Pear Structure</ttl><xreftext>Figure 7.1, “The Pear Structure”</xreftext></obj></div><div element="section" href="#ugr.tools.pear.packager.using_pear_gener
 ation_wizard" number="7.1.2" targetptr="ugr.tools.pear.packager.using_pear_generation_wizard"><ttl>Using the PEAR Generation Wizard</ttl><xreftext>Section 7.1.2, “Using the PEAR Generation Wizard”</xreftext><div element="section" href="#ugr.tools.pear.packager.wizard.component_information" number="7.1.2.1" targetptr="ugr.tools.pear.packager.wizard.component_information"><ttl>The Component Information page</ttl><xreftext>Section 7.1.2.1, “The Component Information page”</xreftext><obj element="figure" href="#ugr.tools.pear.packager.fig.wizard.component_information" number="7.2" targetptr="ugr.tools.pear.packager.fig.wizard.component_information"><ttl>The Component Information Page</ttl><xreftext>Figure 7.2, “The Component Information Page”</xreftext></obj></div><div element="section" href="#ugr.tools.pear.packager.wizard.install_environment" number="7.1.2.2" targetptr="ugr.tools.pear.packager.wizard.install_environment"><ttl>The Installa
 tion Environment page</ttl><xreftext>Section 7.1.2.2, “The Installation Environment page”</xreftext><obj element="figure" href="#ugr.tools.pear.packager.fig.wizard.install_environment" number="7.3" targetptr="ugr.tools.pear.packager.fig.wizard.install_environment"><ttl>The Installation Environment Page</ttl><xreftext>Figure 7.3, “The Installation Environment Page”</xreftext></obj></div><div element="section" href="#ugr.tools.pear.packager.wizard.file_content" number="7.1.2.3" targetptr="ugr.tools.pear.packager.wizard.file_content"><ttl>The PEAR file content page</ttl><xreftext>Section 7.1.2.3, “The PEAR file content page”</xreftext><obj element="figure" href="#ugr.tools.pear.packager.fig.wizard.export" number="7.4" targetptr="ugr.tools.pear.packager.fig.wizard.export"><ttl>The PEAR File Export Page</ttl><xreftext>Figure 7.4, “The PEAR File Export Page”</xreftext></obj></div></div></div><div element="section" href="#ugr.tool
 s.pear.packager.using_command_line" number="7.2" targetptr="ugr.tools.pear.packager.using_command_line"><ttl>Using the PEAR command line packager</ttl><xreftext>Section 7.2, “Using the PEAR command line packager”</xreftext></div></div><div element="chapter" href="#ugr.tools.pear.installer" number="8" targetptr="ugr.tools.pear.installer"><ttl>PEAR Installer User's Guide</ttl><xreftext>Chapter 8, <fo:inline xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:xlink="http://www.w3.org/1999/xlink" font-style="italic">PEAR Installer User's Guide</fo:inline></xreftext></div><div element="chapter" href="#ugr.tools.pear.merger" number="9" targetptr="ugr.tools.pear.merger"><ttl>PEAR Merger User's Guide</ttl><xreftext>Chapter 9, <fo:inline xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:xlink="http://www.w3.org/1999/xlink" font-style="italic">PEAR Merger User's Guide</fo:inline></xreftext><div element="section" href="#ugr.tools.pear.merger.merge_details" number="9.
 1" targetptr="ugr.tools.pear.merger.merge_details"><ttl>Details of the merging process</ttl><xreftext>Section 9.1, “Details of the merging process”</xreftext></div><div element="section" href="#ugr.tools.pear.merger.testing_modifying_resulting_pear" number="9.2" targetptr="ugr.tools.pear.merger.testing_modifying_resulting_pear"><ttl>Testing and Modifying the resulting PEAR</ttl><xreftext>Section 9.2, “Testing and Modifying the resulting PEAR”</xreftext></div><div element="section" href="#ugr.tools.pear.merger.restrictions_limitations" number="9.3" targetptr="ugr.tools.pear.merger.restrictions_limitations"><ttl>Restrictions and Limitations</ttl><xreftext>Section 9.3, “Restrictions and Limitations”</xreftext></div></div></div>