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Posted to issues@airavata.apache.org by "Supun Chathuranga Nakandala (JIRA)" <ji...@apache.org> on 2016/03/28 21:23:25 UTC

[jira] [Resolved] (AIRAVATA-1930) When experiments are cloned and launched the ARCHIVING does not function as the file path sent by PGA is incorrect

     [ https://issues.apache.org/jira/browse/AIRAVATA-1930?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]

Supun Chathuranga Nakandala resolved AIRAVATA-1930.
---------------------------------------------------
    Resolution: Fixed

> When experiments are cloned and launched the ARCHIVING does not function as the file path sent by PGA is incorrect
> ------------------------------------------------------------------------------------------------------------------
>
>                 Key: AIRAVATA-1930
>                 URL: https://issues.apache.org/jira/browse/AIRAVATA-1930
>             Project: Airavata
>          Issue Type: Bug
>          Components: PGA PHP Web Gateway
>    Affects Versions: 0.16
>         Environment: https://seagrid.org
>            Reporter: Eroma
>            Assignee: Supun Chathuranga Nakandala
>             Fix For: 0.16
>
>
> 1. Cloned an experiment which had files archived in the storage. 
> 2. The new cloned experiment got successfully completed. 
> 3. No outputs are displayed in the experiment summary or on the storage. no ARCHIVE folder as well. 
> 4. Only shows exp and job status as COMPLETED. 
> 5. In stampede job was completed and all files exists. but in storage only the inputs are there
> 6. Airavata log has 
> ERROR org.apache.airavata.gfac.impl.task.SCPDataStageTask  - mkdir: cannot create directory ‘/Eroma2016’: Permission denied
> org.apache.airavata.gfac.core.SSHApiException: mkdir: cannot create directory ‘/Eroma2016’: Permission denied
>         at org.apache.airavata.gfac.impl.SSHUtils.makeDirectory(SSHUtils.java:454)
>         at org.apache.airavata.gfac.impl.task.SCPDataStageTask.execute(SCPDataStageTask.java:170)
>         at org.apache.airavata.gfac.impl.GFacEngineImpl.executeTask(GFacEngineImpl.java:737)
>         at org.apache.airavata.gfac.impl.GFacEngineImpl.outputDataStaging(GFacEngineImpl.java:689)
>         at org.apache.airavata.gfac.impl.GFacEngineImpl.executeTaskListFrom(GFacEngineImpl.java:299)
>         at org.apache.airavata.gfac.impl.GFacEngineImpl.continueProcess(GFacEngineImpl.java:648)
>         at org.apache.airavata.gfac.impl.GFacWorker.continueTaskExecution(GFacWorker.java:197)
>         at org.apache.airavata.gfac.impl.GFacWorker.run(GFacWorker.java:97)
>         at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
>         at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
>         at java.lang.Thread.run(Thread.java:745)



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