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Posted to dev@ctakes.apache.org by Moinuddin Syed <mo...@justdial.com> on 2016/11/21 10:21:37 UTC

Medical reports

Hi,

I want to extract the TEST names from a medical report and their 
RESULTS, which are in this format, extracted using OCR

Test Result                           Normal Value
Serum Triglycerides 67                              90 - 200 mgs/dl
Serum HDL: Cholesterol                38 35 - 55 mgs/dl
Serum LDL: Cholesterol                49 85 - 150 mgs/dl
Serum VLDL: Cholesterol 13                            10 \u2014 40 mgs/dl

I figured that I may need to use Clinical Pipeline. cTAKES seems a bit 
complicated to me as there are many components and I'm not sure about 
how to go with them, also it seems that I need to get UMLS account to 
get dictionary lookup.

Can you briefly guide me as to what steps I need to take to perform NER 
on medical report for TESTS and their RESULTS.

Thanks


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