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Posted to issues@airavata.apache.org by "Eroma (JIRA)" <ji...@apache.org> on 2017/07/31 20:42:00 UTC
[jira] [Created] (AIRAVATA-2497) Job output file(s) not transferred
to storage resource
Eroma created AIRAVATA-2497:
-------------------------------
Summary: Job output file(s) not transferred to storage resource
Key: AIRAVATA-2497
URL: https://issues.apache.org/jira/browse/AIRAVATA-2497
Project: Airavata
Issue Type: Bug
Components: Airavata System
Affects Versions: 0.17
Reporter: Eroma
Assignee: Supun Chathuranga Nakandala
Fix For: 0.18
Transferring output files of completed jobs is not working intermittently.
Scenario 1
1. Experiment launched and job submitted
2. Job completed successfully and output files (output tar, stdout, stderr) exists in the working directory).
3. Transferring of output-analysys.tar initiated and the task completed with messages [1]
4. But actually the file was not transferred.
5. For files that successfully transferred message [2] exist with the file size in the log but not for this file.
[1]
2017-07-30 12:39:47,126 [pool-9-thread-1362] INFO o.a.a.g.impl.HPCRemoteCluster - Transferring from:/scratch/01623/us3/airavata-workingdirs/PROCESS_20915856-5824-4e20-b23f-7577a27e27db/output/analysis-results.tar To: /srv/www/htdocs/uslims3/uslims3_data/81659f2e-73f5-ed84-15ce-e601808c3673/analysis-results.tar
2017-07-30 12:40:03,507 [pool-9-thread-1362] INFO o.a.a.gfac.impl.SSHUtils - Initiating transfer from:/scratch/01623/us3/airavata-workingdirs/PROCESS_20915856-5824-4e20-b23f-7577a27e27db/output/analysis-results.tar To: /srv/www/htdocs/uslims3/uslims3_data/81659f2e-73f5-ed84-15ce-e601808c3673/analysis-results.tar, Ignore Empty file : true
2017-07-30 12:40:04,870 [pool-9-thread-1362] INFO o.a.a.g.c.context.TaskContext - expId: US3-AIRA_3d062f7e-6994-4a7d-89fd-0949a8a541ed, processId: PROCESS_20915856-5824-4e20-b23f-7577a27e27db, taskId: TASK_a4b09bc8-d1b8-4d1f-90fa-fa7455b3cc23, type: DATA_STAGING : Task status changed EXECUTING -> COMPLETED
[2]
2017-07-30 12:40:20,968 [pool-9-thread-1362] INFO o.a.a.gfac.impl.SSHUtils - Transferring from:/scratch/01623/us3/airavata-workingdirs/PROCESS_20915856-5824-4e20-b23f-7577a27e27db/Ultrascan.stderr To: /srv/www/htdocs/uslims3/uslims3_data/81659f2e-73f5-ed84-15ce-e601808c3673/Ultrascan.stderr, File Size : 1776, Ignore Empty file : true
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