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Posted to issues@ozone.apache.org by "smengcl (via GitHub)" <gi...@apache.org> on 2024/02/27 20:28:22 UTC
[PR] HDDS-10431. Merge recent commits from master (54548aa7) to HDDS-7593 [ozone]
smengcl opened a new pull request, #6286:
URL: https://github.com/apache/ozone/pull/6286
## What changes were proposed in this pull request?
Merge recent commits from master to HDDS-7593. Resolve code conflicts (mostly imports), and manually fix changes that are not solved by auto merge:
1. Adapt to HDDS-10226 in `TestOmMetadataManager` and `TestOMRecoverLeaseRequest`.
2. Adapt to HDDS-10410 in `FilePerBlockStrategy`.
## What is the link to the Apache JIRA
https://issues.apache.org/jira/browse/HDDS-10431
## How was this patch tested?
- Green CI.
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Re: [PR] HDDS-10431. Merge recent commits from master (7c8160fe) to HDDS-7593 [ozone]
Posted by "smengcl (via GitHub)" <gi...@apache.org>.
smengcl merged PR #6286:
URL: https://github.com/apache/ozone/pull/6286
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Re: [PR] HDDS-10431. Merge recent commits from master (7c8160fe) to HDDS-7593 [ozone]
Posted by "smengcl (via GitHub)" <gi...@apache.org>.
smengcl commented on PR #6286:
URL: https://github.com/apache/ozone/pull/6286#issuecomment-1984559553
Thanks @jojochuang for reviewing this. I will push from local in a minute.
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Re: [PR] HDDS-10431. Merge recent commits from master (54548aa7) to HDDS-7593 [ozone]
Posted by "jojochuang (via GitHub)" <gi...@apache.org>.
jojochuang commented on PR #6286:
URL: https://github.com/apache/ozone/pull/6286#issuecomment-1970140245
The test failures don't look related but they are reproducible.
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Re: [PR] HDDS-10431. Merge recent commits from master (7c8160fe) to HDDS-7593 [ozone]
Posted by "smengcl (via GitHub)" <gi...@apache.org>.
smengcl commented on PR #6286:
URL: https://github.com/apache/ozone/pull/6286#issuecomment-1984561956
Done.
Also thanks @jojochuang for all the help on resolving the test failures in this one!
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Re: [PR] HDDS-10431. Merge recent commits from master (54548aa7) to HDDS-7593 [ozone]
Posted by "jojochuang (via GitHub)" <gi...@apache.org>.
jojochuang commented on PR #6286:
URL: https://github.com/apache/ozone/pull/6286#issuecomment-1981563635
Apart from HDDS-10471, another problem is TestOMRecoverLeaseRequest#testLeaseSoftLimitForHsyncRecoverFile fails consistently. It looks like a regression in the master branch where modification time of an open key is always zero.
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Re: [PR] HDDS-10431. Merge recent commits from master (54548aa7) to HDDS-7593 [ozone]
Posted by "smengcl (via GitHub)" <gi...@apache.org>.
smengcl commented on PR #6286:
URL: https://github.com/apache/ozone/pull/6286#issuecomment-1973796116
I've narrowed down the crashing test to `TestOzoneClient#testPutKeyRatisOneNode`:
https://github.com/smengcl/hadoop-ozone/commits/HDDS-7593-unit-ci-failure/
It is steadily reproducible in GH CI but not for me locally. So weird.
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Re: [PR] HDDS-10431. Merge recent commits from master (54548aa7) to HDDS-7593 [ozone]
Posted by "smengcl (via GitHub)" <gi...@apache.org>.
smengcl commented on PR #6286:
URL: https://github.com/apache/ozone/pull/6286#issuecomment-1972376213
@jojochuang interesting.
I also ran `hadoop-ozone/dev-support/checks/unit.sh` locally earlier but I didn't get it to crash.
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Re: [PR] HDDS-10431. Merge recent commits from master (54548aa7) to HDDS-7593 [ozone]
Posted by "jojochuang (via GitHub)" <gi...@apache.org>.
jojochuang commented on PR #6286:
URL: https://github.com/apache/ozone/pull/6286#issuecomment-1972362563
I can reproduce it if I follow exactly the GitHub Action.
`export MAVEN_OPTS="-Dhttp.keepAlive=false -Dmaven.wagon.http.pool=false -Dmaven.wagon.http.retryHandler.class=standard -Dmaven.wagon.http.retryHandler.count=3"
hadoop-ozone/dev-support/checks/unit.sh
`
It created this dump file:
```
# Created at 2024-02-29T16:02:59.050
<<exit>> <<143>>
# Created at 2024-02-29T16:02:59.051
System.exit() or native command error interrupted process checker.
java.lang.IllegalStateException: error [STOPPED] to read process 2414
at org.apache.maven.surefire.booter.PpidChecker.checkProcessInfo(PpidChecker.java:148)
at org.apache.maven.surefire.booter.PpidChecker.isProcessAlive(PpidChecker.java:134)
at org.apache.maven.surefire.booter.ForkedBooter$2.run(ForkedBooter.java:278)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
at java.util.concurrent.FutureTask.runAndReset(FutureTask.java:308)
at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$301(ScheduledThreadPoolExecutor.java:180)
at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:294)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:750)
```
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Re: [PR] HDDS-10431. Merge recent commits from master (54548aa7) to HDDS-7593 [ozone]
Posted by "smengcl (via GitHub)" <gi...@apache.org>.
smengcl commented on PR #6286:
URL: https://github.com/apache/ozone/pull/6286#issuecomment-1972391174
I'm able to trim down the CI to make `unit` crash within 2 minutes:
https://github.com/smengcl/hadoop-ozone/actions/runs/8105695189/job/22154637226
From the [artifact](https://github.com/smengcl/hadoop-ozone/actions/runs/8105695189/artifacts/1288071325), it looks like JVM crashed during checksum calc called from `ChunkInputStream.readChunk`:
[hs_err_pid2464.log](https://github.com/apache/ozone/files/14455939/hs_err_pid2464.log)
```
#
# A fatal error has been detected by the Java Runtime Environment:
#
# SIGSEGV (0xb) at pc=0x00007f787f341870, pid=2464, tid=0x00007f787e9c4700
#
# JRE version: OpenJDK Runtime Environment (8.0_402-b06) (build 1.8.0_402-b06)
# Java VM: OpenJDK 64-Bit Server VM (25.402-b06 mixed mode linux-amd64 compressed oops)
# Problematic frame:
# V [libjvm.so+0x82d870]
#
# Failed to write core dump. Core dumps have been disabled. To enable core dumping, try "ulimit -c unlimited" before starting Java again
#
# If you would like to submit a bug report, please visit:
# https://github.com/adoptium/adoptium-support/issues
#
--------------- T H R E A D ---------------
Current thread (0x00007f787800a800): JavaThread "main" [_thread_in_vm, id=2466, stack(0x00007f787e8c5000,0x00007f787e9c5000)]
siginfo: si_signo: 11 (SIGSEGV), si_code: 1 (SEGV_MAPERR), si_addr: 0x00007f78539ff010
...
Stack: [0x00007f787e8c5000,0x00007f787e9c5000], sp=0x00007f787e9bfe28, free space=1003k
Native frames: (J=compiled Java code, j=interpreted, Vv=VM code, C=native code)
V [libjvm.so+0x82d870]
j sun.misc.Unsafe.copyMemory(Ljava/lang/Object;JLjava/lang/Object;JJ)V+0
j java.nio.Bits.copyToArray(JLjava/lang/Object;JJJ)V+42
j java.nio.DirectByteBuffer.get([BII)Ljava/nio/ByteBuffer;+101
j java.nio.ByteBuffer.get([B)Ljava/nio/ByteBuffer;+5
j org.apache.hadoop.ozone.common.ChecksumByteBufferImpl.update(Ljava/nio/ByteBuffer;)V+123
j org.apache.hadoop.ozone.common.Checksum.lambda$newChecksumByteBufferFunction$1(Lorg/apache/hadoop/ozone/common/ChecksumByteBuffer;Ljava/nio/ByteBuffer;)Lorg/apache/ratis/thirdparty/com/google/protobuf/ByteString;+8
j org.apache.hadoop.ozone.common.Checksum$$Lambda$489.apply(Ljava/lang/Object;)Ljava/lang/Object;+8
j org.apache.hadoop.ozone.common.Checksum.computeChecksum(Ljava/nio/ByteBuffer;Ljava/util/function/Function;I)Lorg/apache/ratis/thirdparty/com/google/protobuf/ByteString;+28
j org.apache.hadoop.ozone.common.Checksum.computeChecksum(Lorg/apache/hadoop/ozone/common/ChunkBuffer;)Lorg/apache/hadoop/ozone/common/ChecksumData;+108
j org.apache.hadoop.ozone.common.Checksum.verifyChecksum(Lorg/apache/hadoop/ozone/common/ChunkBuffer;Lorg/apache/hadoop/ozone/common/ChecksumData;I)Z+35
j org.apache.hadoop.ozone.common.Checksum.verifyChecksum(Ljava/nio/ByteBuffer;Lorg/apache/hadoop/ozone/common/ChecksumData;I)Z+6
j org.apache.hadoop.ozone.common.Checksum.verifyChecksum(Lorg/apache/ratis/thirdparty/com/google/protobuf/ByteString;Lorg/apache/hadoop/ozone/common/ChecksumData;I)Z+8
j org.apache.hadoop.ozone.common.Checksum.verifyChecksum(Ljava/util/List;Lorg/apache/hadoop/ozone/common/ChecksumData;IZ)Z+32
j org.apache.hadoop.hdds.scm.storage.ChunkInputStream.validateChunk(Lorg/apache/hadoop/hdds/protocol/datanode/proto/ContainerProtos$ContainerCommandRequestProto;Lorg/apache/hadoop/hdds/protocol/datanode/proto/ContainerProtos$ContainerCommandResponseProto;)V+242
j org.apache.hadoop.hdds.scm.storage.ChunkInputStream$$Lambda$575.accept(Ljava/lang/Object;Ljava/lang/Object;)V+12
j org.apache.hadoop.hdds.scm.XceiverClientSpi.sendCommand(Lorg/apache/hadoop/hdds/protocol/datanode/proto/ContainerProtos$ContainerCommandRequestProto;Ljava/util/List;)Lorg/apache/hadoop/hdds/protocol/datanode/proto/ContainerProtos$ContainerCommandResponseProto;+53
j org.apache.hadoop.hdds.scm.storage.ContainerProtocolCalls.readChunk(Lorg/apache/hadoop/hdds/scm/XceiverClientSpi;Lorg/apache/hadoop/hdds/protocol/datanode/proto/ContainerProtos$ChunkInfo;Lorg/apache/hadoop/hdds/client/BlockID;Ljava/util/List;Lorg/apache/hadoop/hdds/protocol/datanode/proto/ContainerProtos$ContainerCommandRequestProto$Builder;Lorg/apache/hadoop/hdds/protocol/DatanodeDetails;)Lorg/apache/hadoop/hdds/protocol/datanode/proto/ContainerProtos$ReadChunkResponseProto;+19
j org.apache.hadoop.hdds.scm.storage.ContainerProtocolCalls.lambda$readChunk$2(Lorg/apache/hadoop/hdds/scm/XceiverClientSpi;Lorg/apache/hadoop/hdds/protocol/datanode/proto/ContainerProtos$ChunkInfo;Lorg/apache/hadoop/hdds/client/BlockID;Ljava/util/List;Lorg/apache/hadoop/hdds/protocol/datanode/proto/ContainerProtos$ContainerCommandRequestProto$Builder;Lorg/apache/hadoop/hdds/protocol/DatanodeDetails;)Lorg/apache/hadoop/hdds/protocol/datanode/proto/ContainerProtos$ReadChunkResponseProto;+8
j org.apache.hadoop.hdds.scm.storage.ContainerProtocolCalls$$Lambda$576.apply(Ljava/lang/Object;)Ljava/lang/Object;+24
j org.apache.hadoop.hdds.scm.storage.ContainerProtocolCalls.tryEachDatanode(Lorg/apache/hadoop/hdds/scm/pipeline/Pipeline;Lorg/apache/ratis/util/function/CheckedFunction;Ljava/util/function/Function;)Ljava/lang/Object;+18
j org.apache.hadoop.hdds.scm.storage.ContainerProtocolCalls.readChunk(Lorg/apache/hadoop/hdds/scm/XceiverClientSpi;Lorg/apache/hadoop/hdds/protocol/datanode/proto/ContainerProtos$ChunkInfo;Lorg/apache/hadoop/hdds/client/BlockID;Ljava/util/List;Lorg/apache/hadoop/security/token/Token;)Lorg/apache/hadoop/hdds/protocol/datanode/proto/ContainerProtos$ReadChunkResponseProto;+83
j org.apache.hadoop.hdds.scm.storage.ChunkInputStream.readChunk(Lorg/apache/hadoop/hdds/protocol/datanode/proto/ContainerProtos$ChunkInfo;)[Ljava/nio/ByteBuffer;+25
j org.apache.hadoop.hdds.scm.storage.ChunkInputStream.readChunkDataIntoBuffers(Lorg/apache/hadoop/hdds/protocol/datanode/proto/ContainerProtos$ChunkInfo;)V+3
j org.apache.hadoop.hdds.scm.storage.ChunkInputStream.readChunkFromContainer(I)V+115
j org.apache.hadoop.hdds.scm.storage.ChunkInputStream.prepareRead(I)I+76
j org.apache.hadoop.hdds.scm.storage.ChunkInputStream.read([BII)I+55
j org.apache.hadoop.hdds.scm.storage.ByteArrayReader.readFromBlock(Ljava/io/InputStream;I)I+22
j org.apache.hadoop.hdds.scm.storage.BlockInputStream.readWithStrategy(Lorg/apache/hadoop/hdds/scm/storage/ByteReaderStrategy;)I+139
j org.apache.hadoop.hdds.scm.storage.ExtendedInputStream.read([BII)I+31
j org.apache.hadoop.hdds.scm.storage.ByteArrayReader.readFromBlock(Ljava/io/InputStream;I)I+22
j org.apache.hadoop.hdds.scm.storage.MultipartInputStream.readWithStrategy(Lorg/apache/hadoop/hdds/scm/storage/ByteReaderStrategy;)I+125
j org.apache.hadoop.hdds.scm.storage.ExtendedInputStream.read([BII)I+31
j org.apache.hadoop.ozone.client.io.OzoneInputStream.read([BII)I+7
j java.io.InputStream.read([B)I+5
j org.apache.hadoop.ozone.client.TestOzoneClient.testPutKeyRatisOneNode()V+123
```
seg fault, invalid memory access.
A second JVM crash happened in protobuf's `RopeByteString.copyToInternal`, called from `ChunkInputStream.readChunk` as well it seems:
[hs_err_pid2979.log](https://github.com/apache/ozone/files/14455941/hs_err_pid2979.log)
```
#
# A fatal error has been detected by the Java Runtime Environment:
#
# SIGSEGV (0xb) at pc=0x00007f75190523b0, pid=2979, tid=0x00007f752d2bc700
#
# JRE version: OpenJDK Runtime Environment (8.0_402-b06) (build 1.8.0_402-b06)
# Java VM: OpenJDK 64-Bit Server VM (25.402-b06 mixed mode linux-amd64 compressed oops)
# Problematic frame:
# v ~StubRoutines::jlong_disjoint_arraycopy
#
# Failed to write core dump. Core dumps have been disabled. To enable core dumping, try "ulimit -c unlimited" before starting Java again
#
# If you would like to submit a bug report, please visit:
# https://github.com/adoptium/adoptium-support/issues
#
--------------- T H R E A D ---------------
Current thread (0x00007f752800a800): JavaThread "main" [_thread_in_Java, id=2980, stack(0x00007f752d1bd000,0x00007f752d2bd000)]
siginfo: si_signo: 11 (SIGSEGV), si_code: 1 (SEGV_MAPERR), si_addr: 0x00007f750a8fc010
Registers:
RAX=0x00007f750a8fc410, RBX=0x0000000000000000, RCX=0x000000076c60fd38, RDX=0xffffffffffffff84
RSP=0x00007f752d2b5af0, RBP=0x00007f752d2b5af0, RSI=0x000000076c60f940, RDI=0x00007f750a8fc408
R8 =0x0000000000000000, R9 =0x00007f750a8fc010, R10=0x00007f7519052940, R11=0x000000076c60f930
R12=0x0000000000000000, R13=0x0000000000000400, R14=0x000000076c70f940, R15=0x00007f752800a800
RIP=0x00007f75190523b0, EFLAGS=0x0000000000010286, CSGSFS=0x002b000000000033, ERR=0x0000000000000004
TRAPNO=0x000000000000000e
...
Register to memory mapping:
RAX=0x00007f750a8fc410 is an unknown value
RBX=0x0000000000000000 is an unknown value
RCX=0x000000076c60fd38 is an oop
[error occurred during error reporting (printing register info), id 0xb]
Stack: [0x00007f752d1bd000,0x00007f752d2bd000], sp=0x00007f752d2b5af0, free space=994k
Native frames: (J=compiled Java code, j=interpreted, Vv=VM code, C=native code)
v ~StubRoutines::jlong_disjoint_arraycopy
J 2582 C2 java.nio.DirectByteBuffer.get([BII)Ljava/nio/ByteBuffer; (126 bytes) @ 0x00007f7519810273 [0x00007f75198101c0+0xb3]
J 2416 C1 org.apache.ratis.thirdparty.com.google.protobuf.NioByteString.copyToInternal([BIII)V (26 bytes) @ 0x00007f751978425c [0x00007f7519783fa0+0x2bc]
j org.apache.ratis.thirdparty.com.google.protobuf.RopeByteString.copyToInternal([BIII)V+71
j org.apache.ratis.thirdparty.com.google.protobuf.RopeByteString.copyToInternal([BIII)V+71
j org.apache.ratis.thirdparty.com.google.protobuf.RopeByteString.copyToInternal([BIII)V+71
j org.apache.ratis.thirdparty.com.google.protobuf.RopeByteString.copyToInternal([BIII)V+71
j org.apache.ratis.thirdparty.com.google.protobuf.RopeByteString.copyToInternal([BIII)V+71
j org.apache.ratis.thirdparty.com.google.protobuf.RopeByteString.copyToInternal([BIII)V+71
j org.apache.ratis.thirdparty.com.google.protobuf.RopeByteString.copyToInternal([BIII)V+71
j org.apache.ratis.thirdparty.com.google.protobuf.RopeByteString.copyToInternal([BIII)V+71
j org.apache.ratis.thirdparty.com.google.protobuf.RopeByteString.copyToInternal([BIII)V+71
j org.apache.ratis.thirdparty.com.google.protobuf.RopeByteString.copyToInternal([BIII)V+71
j org.apache.ratis.thirdparty.com.google.protobuf.RopeByteString.copyToInternal([BIII)V+71
j org.apache.ratis.thirdparty.com.google.protobuf.RopeByteString.copyToInternal([BIII)V+71
j org.apache.ratis.thirdparty.com.google.protobuf.RopeByteString.copyToInternal([BIII)V+71
j org.apache.ratis.thirdparty.com.google.protobuf.RopeByteString.copyToInternal([BIII)V+71
j org.apache.ratis.thirdparty.com.google.protobuf.RopeByteString.copyToInternal([BIII)V+71
j org.apache.ratis.thirdparty.com.google.protobuf.RopeByteString.copyToInternal([BIII)V+71
j org.apache.ratis.thirdparty.com.google.protobuf.RopeByteString.copyToInternal([BIII)V+71
j org.apache.ratis.thirdparty.com.google.protobuf.RopeByteString.copyToInternal([BIII)V+71
j org.apache.ratis.thirdparty.com.google.protobuf.RopeByteString.copyToInternal([BIII)V+71
j org.apache.ratis.thirdparty.com.google.protobuf.RopeByteString.copyToInternal([BIII)V+71
j org.apache.ratis.thirdparty.com.google.protobuf.RopeByteString.copyToInternal([BIII)V+71
j org.apache.ratis.thirdparty.com.google.protobuf.RopeByteString.copyToInternal([BIII)V+71
j org.apache.ratis.thirdparty.com.google.protobuf.RopeByteString.copyToInternal([BIII)V+71
j org.apache.ratis.thirdparty.com.google.protobuf.RopeByteString.copyToInternal([BIII)V+71
j org.apache.ratis.thirdparty.com.google.protobuf.RopeByteString.copyToInternal([BIII)V+71
j org.apache.ratis.thirdparty.com.google.protobuf.RopeByteString.copyToInternal([BIII)V+71
j org.apache.ratis.thirdparty.com.google.protobuf.RopeByteString.copyToInternal([BIII)V+71
j org.apache.ratis.thirdparty.com.google.protobuf.RopeByteString.copyToInternal([BIII)V+71
j org.apache.ratis.thirdparty.com.google.protobuf.RopeByteString.copyToInternal([BIII)V+71
j org.apache.ratis.thirdparty.com.google.protobuf.RopeByteString.copyToInternal([BIII)V+71
J 2415 C1 org.apache.ratis.thirdparty.com.google.protobuf.ByteString.toByteArray()[B (27 bytes) @ 0x00007f7519783bf4 [0x00007f7519783960+0x294]
j org.apache.ratis.thirdparty.com.google.protobuf.RopeByteString.asReadOnlyByteBuffer()Ljava/nio/ByteBuffer;+1
j org.apache.hadoop.ozone.common.Checksum.verifyChecksum(Lorg/apache/ratis/thirdparty/com/google/protobuf/ByteString;Lorg/apache/hadoop/ozone/common/ChecksumData;I)Z+1
j org.apache.hadoop.ozone.common.Checksum.verifyChecksum(Ljava/util/List;Lorg/apache/hadoop/ozone/common/ChecksumData;IZ)Z+32
j org.apache.hadoop.hdds.scm.storage.ChunkInputStream.validateChunk(Lorg/apache/hadoop/hdds/protocol/datanode/proto/ContainerProtos$ContainerCommandRequestProto;Lorg/apache/hadoop/hdds/protocol/datanode/proto/ContainerProtos$ContainerCommandResponseProto;)V+242
j org.apache.hadoop.hdds.scm.storage.ChunkInputStream$$Lambda$613.accept(Ljava/lang/Object;Ljava/lang/Object;)V+12
j org.apache.hadoop.hdds.scm.XceiverClientSpi.sendCommand(Lorg/apache/hadoop/hdds/protocol/datanode/proto/ContainerProtos$ContainerCommandRequestProto;Ljava/util/List;)Lorg/apache/hadoop/hdds/protocol/datanode/proto/ContainerProtos$ContainerCommandResponseProto;+53
j org.apache.hadoop.hdds.scm.storage.ContainerProtocolCalls.readChunk(Lorg/apache/hadoop/hdds/scm/XceiverClientSpi;Lorg/apache/hadoop/hdds/protocol/datanode/proto/ContainerProtos$ChunkInfo;Lorg/apache/hadoop/hdds/client/BlockID;Ljava/util/List;Lorg/apache/hadoop/hdds/protocol/datanode/proto/ContainerProtos$ContainerCommandRequestProto$Builder;Lorg/apache/hadoop/hdds/protocol/DatanodeDetails;)Lorg/apache/hadoop/hdds/protocol/datanode/proto/ContainerProtos$ReadChunkResponseProto;+19
j org.apache.hadoop.hdds.scm.storage.ContainerProtocolCalls.lambda$readChunk$2(Lorg/apache/hadoop/hdds/scm/XceiverClientSpi;Lorg/apache/hadoop/hdds/protocol/datanode/proto/ContainerProtos$ChunkInfo;Lorg/apache/hadoop/hdds/client/BlockID;Ljava/util/List;Lorg/apache/hadoop/hdds/protocol/datanode/proto/ContainerProtos$ContainerCommandRequestProto$Builder;Lorg/apache/hadoop/hdds/protocol/DatanodeDetails;)Lorg/apache/hadoop/hdds/protocol/datanode/proto/ContainerProtos$ReadChunkResponseProto;+8
j org.apache.hadoop.hdds.scm.storage.ContainerProtocolCalls$$Lambda$614.apply(Ljava/lang/Object;)Ljava/lang/Object;+24
j org.apache.hadoop.hdds.scm.storage.ContainerProtocolCalls.tryEachDatanode(Lorg/apache/hadoop/hdds/scm/pipeline/Pipeline;Lorg/apache/ratis/util/function/CheckedFunction;Ljava/util/function/Function;)Ljava/lang/Object;+18
j org.apache.hadoop.hdds.scm.storage.ContainerProtocolCalls.readChunk(Lorg/apache/hadoop/hdds/scm/XceiverClientSpi;Lorg/apache/hadoop/hdds/protocol/datanode/proto/ContainerProtos$ChunkInfo;Lorg/apache/hadoop/hdds/client/BlockID;Ljava/util/List;Lorg/apache/hadoop/security/token/Token;)Lorg/apache/hadoop/hdds/protocol/datanode/proto/ContainerProtos$ReadChunkResponseProto;+83
j org.apache.hadoop.hdds.scm.storage.ChunkInputStream.readChunk(Lorg/apache/hadoop/hdds/protocol/datanode/proto/ContainerProtos$ChunkInfo;)[Ljava/nio/ByteBuffer;+25
j org.apache.hadoop.hdds.scm.storage.ChunkInputStream.readChunkDataIntoBuffers(Lorg/apache/hadoop/hdds/protocol/datanode/proto/ContainerProtos$ChunkInfo;)V+3
j org.apache.hadoop.hdds.scm.storage.ChunkInputStream.readChunkFromContainer(I)V+115
j org.apache.hadoop.hdds.scm.storage.ChunkInputStream.prepareRead(I)I+76
j org.apache.hadoop.hdds.scm.storage.ChunkInputStream.read(Ljava/nio/ByteBuffer;)I+35
j org.apache.hadoop.hdds.scm.storage.ByteBufferReader.readFromBlock(Ljava/io/InputStream;I)I+60
j org.apache.hadoop.hdds.scm.storage.BlockInputStream.readWithStrategy(Lorg/apache/hadoop/hdds/scm/storage/ByteReaderStrategy;)I+139
j org.apache.hadoop.hdds.scm.storage.ExtendedInputStream.read(Ljava/nio/ByteBuffer;)I+24
j org.apache.hadoop.hdds.scm.storage.ByteBufferReader.readFromBlock(Ljava/io/InputStream;I)I+60
j org.apache.hadoop.hdds.scm.storage.MultipartInputStream.readWithStrategy(Lorg/apache/hadoop/hdds/scm/storage/ByteReaderStrategy;)I+125
j org.apache.hadoop.hdds.scm.storage.ExtendedInputStream.read(Ljava/nio/ByteBuffer;)I+24
j org.apache.hadoop.ozone.client.io.OzoneInputStream.read(Ljava/nio/ByteBuffer;)I+18
j org.apache.hadoop.ozone.client.TestBlockOutputStreamIncrementalPutBlock.writeSmallChunk(Z)V+213
v ~StubRoutines::call_stub
V [libjvm.so+0x69f272] JavaCalls::call_helper(JavaValue*, methodHandle*, JavaCallArguments*, Thread*)+0xe32
V [libjvm.so+0x9f5580] Reflection::invoke(instanceKlassHandle, methodHandle, Handle, bool, objArrayHandle, BasicType, objArrayHandle, bool, Thread*)+0xb10
V [libjvm.so+0x9f7056] Reflection::invoke_method(oopDesc*, Handle, objArrayHandle, Thread*)+0x126
V [libjvm.so+0x74b825] JVM_InvokeMethod+0x115
j sun.reflect.NativeMethodAccessorImpl.invoke0(Ljava/lang/reflect/Method;Ljava/lang/Object;[Ljava/lang/Object;)Ljava/lang/Object;+0
j sun.reflect.NativeMethodAccessorImpl.invoke(Ljava/lang/Object;[Ljava/lang/Object;)Ljava/lang/Object;+100
j sun.reflect.DelegatingMethodAccessorImpl.invoke(Ljava/lang/Object;[Ljava/lang/Object;)Ljava/lang/Object;+6
j java.lang.reflect.Method.invoke(Ljava/lang/Object;[Ljava/lang/Object;)Ljava/lang/Object;+56
j org.junit.platform.commons.util.ReflectionUtils.invokeMethod(Ljava/lang/reflect/Method;Ljava/lang/Object;[Ljava/lang/Object;)Ljava/lang/Object;+42
j org.junit.jupiter.engine.execution.MethodInvocation.proceed()Ljava/lang/Object;+16
j org.junit.jupiter.engine.execution.InvocationInterceptorChain$ValidatingInvocation.proceed()Ljava/lang/Object;+8
j org.junit.jupiter.engine.extension.TimeoutExtension.intercept(Lorg/junit/jupiter/api/extension/InvocationInterceptor$Invocation;Lorg/junit/jupiter/api/extension/ReflectiveInvocationContext;Lorg/junit/jupiter/api/extension/ExtensionContext;Lorg/junit/jupiter/engine/extension/TimeoutDuration;Lorg/junit/jupiter/engine/extension/TimeoutExtension$TimeoutProvider;)Ljava/lang/Object;+28
j org.junit.jupiter.engine.extension.TimeoutExtension.interceptTestableMethod(Lorg/junit/jupiter/api/extension/InvocationInterceptor$Invocation;Lorg/junit/jupiter/api/extension/ReflectiveInvocationContext;Lorg/junit/jupiter/api/extension/ExtensionContext;Lorg/junit/jupiter/engine/extension/TimeoutExtension$TimeoutProvider;)Ljava/lang/Object;+31
j org.junit.jupiter.engine.extension.TimeoutExtension.interceptTestTemplateMethod(Lorg/junit/jupiter/api/extension/InvocationInterceptor$Invocation;Lorg/junit/jupiter/api/extension/ReflectiveInvocationContext;Lorg/junit/jupiter/api/extension/ExtensionContext;)V+9
j org.junit.jupiter.engine.descriptor.TestTemplateInvocationTestDescriptor$$Lambda$431.apply(Lorg/junit/jupiter/api/extension/InvocationInterceptor;Lorg/junit/jupiter/api/extension/InvocationInterceptor$Invocation;Lorg/junit/jupiter/api/extension/ReflectiveInvocationContext;Lorg/junit/jupiter/api/extension/ExtensionContext;)V+5
j org.junit.jupiter.engine.execution.InterceptingExecutableInvoker$ReflectiveInterceptorCall.lambda$ofVoidMethod$0(Lorg/junit/jupiter/engine/execution/InterceptingExecutableInvoker$ReflectiveInterceptorCall$VoidMethodInterceptorCall;Lorg/junit/jupiter/api/extension/InvocationInterceptor;Lorg/junit/jupiter/api/extension/InvocationInterceptor$Invocation;Lorg/junit/jupiter/api/extension/ReflectiveInvocationContext;Lorg/junit/jupiter/api/extension/ExtensionContext;)Ljava/lang/Void;+6
j org.junit.jupiter.engine.execution.InterceptingExecutableInvoker$ReflectiveInterceptorCall$$Lambda$430.apply(Lorg/junit/jupiter/api/extension/InvocationInterceptor;Lorg/junit/jupiter/api/extension/InvocationInterceptor$Invocation;Lorg/junit/jupiter/api/extension/ReflectiveInvocationContext;Lorg/junit/jupiter/api/extension/ExtensionContext;)Ljava/lang/Object;+9
j org.junit.jupiter.engine.execution.InterceptingExecutableInvoker.lambda$invoke$0(Lorg/junit/jupiter/engine/execution/InterceptingExecutableInvoker$ReflectiveInterceptorCall;Lorg/junit/jupiter/api/extension/ReflectiveInvocationContext;Lorg/junit/jupiter/api/extension/ExtensionContext;Lorg/junit/jupiter/api/extension/InvocationInterceptor;Lorg/junit/jupiter/api/extension/InvocationInterceptor$Invocation;)Ljava/lang/Object;+6
j org.junit.jupiter.engine.execution.InterceptingExecutableInvoker$$Lambda$448.apply(Lorg/junit/jupiter/api/extension/InvocationInterceptor;Lorg/junit/jupiter/api/extension/InvocationInterceptor$Invocation;)Ljava/lang/Object;+14
j org.junit.jupiter.engine.execution.InvocationInterceptorChain$InterceptedInvocation.proceed()Ljava/lang/Object;+12
j org.junit.jupiter.engine.execution.InvocationInterceptorChain.proceed(Lorg/junit/jupiter/api/extension/InvocationInterceptor$Invocation;)Ljava/lang/Object;+1
j org.junit.jupiter.engine.execution.InvocationInterceptorChain.chainAndInvoke(Lorg/junit/jupiter/api/extension/InvocationInterceptor$Invocation;Lorg/junit/jupiter/engine/execution/InvocationInterceptorChain$InterceptorCall;Ljava/util/List;)Ljava/lang/Object;+24
j org.junit.jupiter.engine.execution.InvocationInterceptorChain.invoke(Lorg/junit/jupiter/api/extension/InvocationInterceptor$Invocation;Lorg/junit/jupiter/engine/extension/ExtensionRegistry;Lorg/junit/jupiter/engine/execution/InvocationInterceptorChain$InterceptorCall;)Ljava/lang/Object;+31
j org.junit.jupiter.engine.execution.InterceptingExecutableInvoker.invoke(Lorg/junit/jupiter/api/extension/InvocationInterceptor$Invocation;Lorg/junit/jupiter/api/extension/ReflectiveInvocationContext;Lorg/junit/jupiter/api/extension/ExtensionContext;Lorg/junit/jupiter/engine/extension/ExtensionRegistry;Lorg/junit/jupiter/engine/execution/InterceptingExecutableInvoker$ReflectiveInterceptorCall;)Ljava/lang/Object;+15
j org.junit.jupiter.engine.execution.InterceptingExecutableInvoker.invoke(Ljava/lang/reflect/Method;Ljava/lang/Object;Lorg/junit/jupiter/api/extension/ExtensionContext;Lorg/junit/jupiter/engine/extension/ExtensionRegistry;Lorg/junit/jupiter/engine/execution/InterceptingExecutableInvoker$ReflectiveInterceptorCall;)Ljava/lang/Object;+55
j org.junit.jupiter.engine.descriptor.TestMethodTestDescriptor.lambda$invokeTestMethod$7(Lorg/junit/jupiter/api/extension/ExtensionContext;Lorg/junit/jupiter/engine/execution/JupiterEngineExecutionContext;)V+28
j org.junit.jupiter.engine.descriptor.TestMethodTestDescriptor$$Lambda$464.execute()V+12
j org.junit.platform.engine.support.hierarchical.ThrowableCollector.execute(Lorg/junit/platform/engine/support/hierarchical/ThrowableCollector$Executable;)V+1
j org.junit.jupiter.engine.descriptor.TestMethodTestDescriptor.invokeTestMethod(Lorg/junit/jupiter/engine/execution/JupiterEngineExecutionContext;Lorg/junit/platform/engine/support/hierarchical/Node$DynamicTestExecutor;)V+21
j org.junit.jupiter.engine.descriptor.TestMethodTestDescriptor.execute(Lorg/junit/jupiter/engine/execution/JupiterEngineExecutionContext;Lorg/junit/platform/engine/support/hierarchical/Node$DynamicTestExecutor;)Lorg/junit/jupiter/engine/execution/JupiterEngineExecutionContext;+44
j org.junit.jupiter.engine.descriptor.TestMethodTestDescriptor.execute(Lorg/junit/platform/engine/support/hierarchical/EngineExecutionContext;Lorg/junit/platform/engine/support/hierarchical/Node$DynamicTestExecutor;)Lorg/junit/platform/engine/support/hierarchical/EngineExecutionContext;+6
j org.junit.platform.engine.support.hierarchical.NodeTestTask.lambda$executeRecursively$6()V+79
j org.junit.platform.engine.support.hierarchical.NodeTestTask$$Lambda$318.execute()V+4
j org.junit.platform.engine.support.hierarchical.ThrowableCollector.execute(Lorg/junit/platform/engine/support/hierarchical/ThrowableCollector$Executable;)V+1
j org.junit.platform.engine.support.hierarchical.NodeTestTask.lambda$executeRecursively$8(Lorg/junit/platform/engine/support/hierarchical/EngineExecutionContext;)V+15
j org.junit.platform.engine.support.hierarchical.NodeTestTask$$Lambda$317.invoke(Lorg/junit/platform/engine/support/hierarchical/EngineExecutionContext;)V+5
j org.junit.platform.engine.support.hierarchical.Node.around(Lorg/junit/platform/engine/support/hierarchical/EngineExecutionContext;Lorg/junit/platform/engine/support/hierarchical/Node$Invocation;)V+2
j org.junit.platform.engine.support.hierarchical.NodeTestTask.lambda$executeRecursively$9()V+14
j org.junit.platform.engine.support.hierarchical.NodeTestTask$$Lambda$316.execute()V+4
j org.junit.platform.engine.support.hierarchical.ThrowableCollector.execute(Lorg/junit/platform/engine/support/hierarchical/ThrowableCollector$Executable;)V+1
j org.junit.platform.engine.support.hierarchical.NodeTestTask.executeRecursively()V+31
...<more frames>...
```
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Re: [PR] HDDS-10431. Merge recent commits from master (7c8160fe) to HDDS-7593 [ozone]
Posted by "jojochuang (via GitHub)" <gi...@apache.org>.
jojochuang commented on PR #6286:
URL: https://github.com/apache/ozone/pull/6286#issuecomment-1984552409
LGTM
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Re: [PR] HDDS-10431. Merge recent commits from master (54548aa7) to HDDS-7593 [ozone]
Posted by "smengcl (via GitHub)" <gi...@apache.org>.
smengcl commented on PR #6286:
URL: https://github.com/apache/ozone/pull/6286#issuecomment-1972061746
Attempting to bump gradle maven exts on my fork:
https://github.com/smengcl/hadoop-ozone/commit/bdd81b507c0eecfbbc43cb63d03393202fa7f95d
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Re: [PR] HDDS-10431. Merge recent commits from master (54548aa7) to HDDS-7593 [ozone]
Posted by "smengcl (via GitHub)" <gi...@apache.org>.
smengcl commented on PR #6286:
URL: https://github.com/apache/ozone/pull/6286#issuecomment-1972393551
Crash 2 looks to have something to do with DirectByteBuffer. Hmm.
Could it have something to do with the boundary calculation in #6256
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Re: [PR] HDDS-10431. Merge recent commits from master (54548aa7) to HDDS-7593 [ozone]
Posted by "smengcl (via GitHub)" <gi...@apache.org>.
smengcl commented on PR #6286:
URL: https://github.com/apache/ozone/pull/6286#issuecomment-1981658882
Just brought 3 new commits including the Direct ByteBuffer crash fix HDDS-10471 into the dev branch:
```
be5ffc29e2 HDDS-10471. [hsync] MockDatanodeStorage.writeChunk should make a copy of byte string. (#6334)
f244a67037 HDDS-10252. [hsync] Revisit configuration keys for incremental chunk list after HDDS-9884 (#6289)
1cf9e95eef HDDS-10427. Retry read wait based on policy. (#6292)
```
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Re: [PR] HDDS-10431. Merge recent commits from master (54548aa7) to HDDS-7593 [ozone]
Posted by "smengcl (via GitHub)" <gi...@apache.org>.
smengcl commented on PR #6286:
URL: https://github.com/apache/ozone/pull/6286#issuecomment-1979440782
During CI debugging, I've noticed that because `unit` job depends on `basic` but not on `build` (plus the fact that `build` takes longer than `basic`), a race can unintentionally cause the `unit` job to use an **old** cached ozone build to run the actual test. This caused my change to print extra debugging log in my branch to not take effect.
My question: Should we make `build` a dependency of `unit`? Or is there a reason not to do so?
cc @adoroszlai
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Re: [PR] HDDS-10431. Merge recent commits from master (54548aa7) to HDDS-7593 [ozone]
Posted by "jojochuang (via GitHub)" <gi...@apache.org>.
jojochuang commented on PR #6286:
URL: https://github.com/apache/ozone/pull/6286#issuecomment-1979356641
Cherrypicking HDDS-9843. Ozone client high memory (heap) utilization on top of
HDDS-9751. [hsync] Make Putblock performance acceptable - DataNode side (#5662)
failed that test. Cherrypicking HDDS-9843 on the commit before does not fail. HDFS-9751 is what caused the problem.
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Re: [PR] HDDS-10431. Merge recent commits from master (54548aa7) to HDDS-7593 [ozone]
Posted by "smengcl (via GitHub)" <gi...@apache.org>.
smengcl commented on PR #6286:
URL: https://github.com/apache/ozone/pull/6286#issuecomment-1971872027
> The test failures don't look related but they are reproducible.
Yes indeed they are reproducible on CI. But it passed locally when I run the test individually. Looks like a maven bug:
```
[INFO] Running org.apache.hadoop.ozone.client.TestOzoneClient
Error: Aborted (core dumped)
Warning: Could not process start event for test [JUnit Jupiter executed by VM 1]
java.lang.IllegalStateException: Overlapping ID assignment for 'HashableTestDescriptor{testDescriptor=DefaultTestDescriptor{id=5866381821535424172, surefireForkId=1, name='JUnit Jupiter', className='null', parentId=null, displayName='null'}, testMojoExecutionId=-331350931641892826}' (prev: '-2067179392706726815').
at com.gradle.scan.plugin.internal.h.g.a (SourceFile:53)
at java.util.HashMap.compute (HashMap.java:1198)
at com.gradle.scan.plugin.internal.h.g.a (SourceFile:46)
at com.gradle.maven.scan.extension.internal.capture.r.j$a.a (SourceFile:324)
at com.gradle.maven.scan.extension.internal.capture.r.j$a.a (SourceFile:226)
at com.gradle.maven.scan.extension.internal.capture.r.j.a (SourceFile:153)
at com.gradle.scan.plugin.internal.o.a$a.a (SourceFile:31)
at com.gradle.scan.plugin.internal.o.a$a.a (SourceFile:20)
at com.gradle.scan.plugin.internal.o.a.c (SourceFile:67)
at java.lang.Thread.run (Thread.java:750)
[INFO] Running org.apache.hadoop.ozone.client.TestOzoneECClient
[INFO] Tests run: 34, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 3.362 s - in org.apache.hadoop.ozone.client.TestOzoneECClient
[INFO] Running org.apache.hadoop.ozone.client.TestBlockOutputStreamIncrementalPutBlock
Error: Aborted (core dumped)
```
https://github.com/apache/ozone/actions/runs/8071125686/job/22135307544?pr=6286
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