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Posted to commits@stanbol.apache.org by al...@apache.org on 2015/06/18 19:10:58 UTC
svn commit: r1686278 [2/2] - in /stanbol/trunk/ontologymanager:
generic/servicesapi/src/main/java/org/apache/stanbol/ontologymanager/servicesapi/ontology/
generic/servicesapi/src/main/java/org/apache/stanbol/ontologymanager/servicesapi/util/
multiplexe...
Added: stanbol/trunk/ontologymanager/web/src/main/java/org/apache/stanbol/ontologymanager/web/resources/RootResource.java
URL: http://svn.apache.org/viewvc/stanbol/trunk/ontologymanager/web/src/main/java/org/apache/stanbol/ontologymanager/web/resources/RootResource.java?rev=1686278&view=auto
==============================================================================
--- stanbol/trunk/ontologymanager/web/src/main/java/org/apache/stanbol/ontologymanager/web/resources/RootResource.java (added)
+++ stanbol/trunk/ontologymanager/web/src/main/java/org/apache/stanbol/ontologymanager/web/resources/RootResource.java Thu Jun 18 17:10:58 2015
@@ -0,0 +1,982 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+package org.apache.stanbol.ontologymanager.web.resources;
+
+import static javax.ws.rs.core.MediaType.APPLICATION_JSON;
+import static javax.ws.rs.core.MediaType.MULTIPART_FORM_DATA;
+import static javax.ws.rs.core.MediaType.TEXT_HTML;
+import static javax.ws.rs.core.MediaType.TEXT_PLAIN;
+import static javax.ws.rs.core.Response.Status.BAD_REQUEST;
+import static javax.ws.rs.core.Response.Status.CONFLICT;
+import static javax.ws.rs.core.Response.Status.INTERNAL_SERVER_ERROR;
+import static javax.ws.rs.core.Response.Status.NOT_FOUND;
+import static javax.ws.rs.core.Response.Status.NO_CONTENT;
+import static javax.ws.rs.core.Response.Status.UNSUPPORTED_MEDIA_TYPE;
+//import static org.apache.stanbol.commons.web.base.CorsHelper.addCORSOrigin;
+import static org.apache.stanbol.commons.web.base.format.KRFormat.FUNCTIONAL_OWL;
+import static org.apache.stanbol.commons.web.base.format.KRFormat.FUNCTIONAL_OWL_TYPE;
+import static org.apache.stanbol.commons.web.base.format.KRFormat.MANCHESTER_OWL;
+import static org.apache.stanbol.commons.web.base.format.KRFormat.MANCHESTER_OWL_TYPE;
+import static org.apache.stanbol.commons.web.base.format.KRFormat.N3;
+import static org.apache.stanbol.commons.web.base.format.KRFormat.N3_TYPE;
+import static org.apache.stanbol.commons.web.base.format.KRFormat.N_TRIPLE;
+import static org.apache.stanbol.commons.web.base.format.KRFormat.N_TRIPLE_TYPE;
+import static org.apache.stanbol.commons.web.base.format.KRFormat.OWL_XML;
+import static org.apache.stanbol.commons.web.base.format.KRFormat.OWL_XML_TYPE;
+import static org.apache.stanbol.commons.web.base.format.KRFormat.RDF_JSON;
+import static org.apache.stanbol.commons.web.base.format.KRFormat.RDF_JSON_TYPE;
+import static org.apache.stanbol.commons.web.base.format.KRFormat.RDF_XML;
+import static org.apache.stanbol.commons.web.base.format.KRFormat.RDF_XML_TYPE;
+import static org.apache.stanbol.commons.web.base.format.KRFormat.TURTLE;
+import static org.apache.stanbol.commons.web.base.format.KRFormat.TURTLE_TYPE;
+import static org.apache.stanbol.commons.web.base.format.KRFormat.X_TURTLE;
+import static org.apache.stanbol.commons.web.base.format.KRFormat.X_TURTLE_TYPE;
+
+import java.io.BufferedInputStream;
+import java.io.ByteArrayInputStream;
+import java.io.IOException;
+import java.io.InputStream;
+import java.net.URI;
+//import com.sun.jersey.api.view.ImplicitProduces;
+//import com.sun.jersey.multipart.BodyPart;
+//import com.sun.jersey.multipart.FormDataBodyPart;
+//import com.sun.jersey.multipart.FormDataMultiPart;
+import java.security.AccessController;
+import java.security.PrivilegedAction;
+import java.util.ArrayList;
+import java.util.Arrays;
+import java.util.Collections;
+import java.util.ConcurrentModificationException;
+import java.util.HashMap;
+import java.util.HashSet;
+import java.util.Iterator;
+import java.util.List;
+import java.util.Map;
+import java.util.Set;
+import java.util.SortedSet;
+import java.util.TreeSet;
+
+import javax.ws.rs.Consumes;
+import javax.ws.rs.DELETE;
+import javax.ws.rs.DefaultValue;
+import javax.ws.rs.GET;
+import javax.ws.rs.POST;
+import javax.ws.rs.PUT;
+import javax.ws.rs.Path;
+import javax.ws.rs.PathParam;
+import javax.ws.rs.Produces;
+import javax.ws.rs.QueryParam;
+import javax.ws.rs.WebApplicationException;
+import javax.ws.rs.core.Context;
+import javax.ws.rs.core.HttpHeaders;
+import javax.ws.rs.core.MediaType;
+import javax.ws.rs.core.Response;
+import javax.ws.rs.core.Response.ResponseBuilder;
+import javax.ws.rs.core.Response.Status;
+import javax.ws.rs.core.UriInfo;
+
+import org.apache.clerezza.jaxrs.utils.form.MultiPartBody;
+import org.apache.clerezza.rdf.core.Graph;
+import org.apache.clerezza.rdf.core.MGraph;
+import org.apache.clerezza.rdf.core.Triple;
+import org.apache.clerezza.rdf.core.TripleCollection;
+import org.apache.clerezza.rdf.core.UriRef;
+import org.apache.clerezza.rdf.core.impl.SimpleMGraph;
+import org.apache.clerezza.rdf.core.impl.TripleImpl;
+import org.apache.clerezza.rdf.core.serializedform.Parser;
+import org.apache.clerezza.rdf.core.serializedform.UnsupportedFormatException;
+import org.apache.clerezza.rdf.ontologies.OWL;
+import org.apache.felix.scr.annotations.Component;
+import org.apache.felix.scr.annotations.Property;
+import org.apache.felix.scr.annotations.Reference;
+import org.apache.felix.scr.annotations.Service;
+import org.apache.stanbol.commons.owl.util.OWL2Constants;
+import org.apache.stanbol.commons.owl.util.OWLUtils;
+import org.apache.stanbol.commons.owl.util.URIUtils;
+import org.apache.stanbol.commons.web.viewable.Viewable;
+//import org.apache.stanbol.commons.web.base.ContextHelper;
+import org.apache.stanbol.ontologymanager.multiplexer.clerezza.collector.MGraphMultiplexer;
+import org.apache.stanbol.ontologymanager.registry.api.RegistryContentException;
+import org.apache.stanbol.ontologymanager.registry.api.RegistryManager;
+import org.apache.stanbol.ontologymanager.registry.api.model.Library;
+import org.apache.stanbol.ontologymanager.servicesapi.collector.OntologyCollector;
+import org.apache.stanbol.ontologymanager.servicesapi.io.OntologyInputSource;
+import org.apache.stanbol.ontologymanager.servicesapi.io.Origin;
+import org.apache.stanbol.ontologymanager.servicesapi.ontology.Multiplexer;
+import org.apache.stanbol.ontologymanager.servicesapi.ontology.OntologyHandleException;
+import org.apache.stanbol.ontologymanager.servicesapi.ontology.OntologyLoadingException;
+import org.apache.stanbol.ontologymanager.servicesapi.ontology.OntologyProvider;
+import org.apache.stanbol.ontologymanager.servicesapi.ontology.OrphanOntologyKeyException;
+import org.apache.stanbol.ontologymanager.servicesapi.scope.OntologySpace;
+import org.apache.stanbol.ontologymanager.servicesapi.scope.Scope;
+import org.apache.stanbol.ontologymanager.servicesapi.scope.ScopeManager;
+import org.apache.stanbol.ontologymanager.servicesapi.session.Session;
+import org.apache.stanbol.ontologymanager.servicesapi.session.SessionManager;
+import org.apache.stanbol.ontologymanager.servicesapi.util.OntologyUtils;
+import org.apache.stanbol.ontologymanager.sources.owlapi.OntologyContentInputSource;
+import org.semanticweb.owlapi.model.AddImport;
+import org.semanticweb.owlapi.model.IRI;
+import org.semanticweb.owlapi.model.OWLDataFactory;
+import org.semanticweb.owlapi.model.OWLImportsDeclaration;
+import org.semanticweb.owlapi.model.OWLOntology;
+import org.semanticweb.owlapi.model.OWLOntologyChange;
+import org.semanticweb.owlapi.model.OWLOntologyCreationException;
+import org.semanticweb.owlapi.model.OWLOntologyID;
+import org.semanticweb.owlapi.model.RemoveImport;
+import org.semanticweb.owlapi.model.SetOntologyID;
+import org.slf4j.Logger;
+import org.slf4j.LoggerFactory;
+
+/**
+ * Provides the basic HTTP methods for storing and managing ontologies regardless of them belonging to a
+ * specific network, scope or session.
+ *
+ * @author anuzzolese, alexdma
+ *
+ */
+@Component
+@Service(Object.class)
+@Property(name = "javax.ws.rs", boolValue = true)
+@Path("/ontonet")
+// @ImplicitProduces(MediaType.TEXT_HTML + ";qs=2")
+public class RootResource extends AbstractOntologyAccessResource {
+
+ protected Multiplexer descriptor;
+
+ protected Multiplexer getDescriptor() {
+ if (descriptor == null) {
+ if (ontologyProvider == null) throw new IllegalStateException(
+ "Tried to obtain a multiplexer before an ontology provider was ready. This shouldn't happen.");
+ descriptor = new MGraphMultiplexer(ontologyProvider.getMetaGraph(MGraph.class));
+ }
+ return descriptor;
+ }
+
+ public class OntologyStats extends ResultData {
+
+ private Set<OntologyCollector> handles;
+
+ private Set<OWLOntologyID> identifiers;
+
+ public Map<OWLOntologyID,OntologyProvider.Status> dependencies;
+
+ private OWLOntology o;
+
+ private UriInfo uriInfo;
+
+ private OWLOntologyID submitted;
+
+ public OntologyStats(UriInfo uriInfo,
+ OWLOntologyID key,
+ OWLOntology o,
+ Set<OWLOntologyID> identifiers,
+ Map<OWLOntologyID,OntologyProvider.Status> dependencies,
+ Set<OntologyCollector> handles) {
+ // this.servletContext = context;
+ this.uriInfo = uriInfo;
+ this.dependencies = dependencies;
+ this.submitted = key;
+ this.o = o;
+ this.identifiers = identifiers;
+ this.handles = handles;
+ }
+
+ public Set<String> getAliases() {
+ Set<String> aliases = new HashSet<String>();
+ for (OWLOntologyID alias : identifiers)
+ // if (!o.getOntologyID().equals(alias))
+ aliases.add(OntologyUtils.encode(alias));
+ return Collections.unmodifiableSet(aliases);
+ }
+
+ public Map<String,String> getDependencies() {
+ Map<String,String> deps = new HashMap<String,String>();
+ for (OWLOntologyID dep : dependencies.keySet()) {
+ deps.put(OntologyUtils.encode(dep), dependencies.get(dep).toString());
+ }
+ return Collections.unmodifiableMap(deps);
+ }
+
+ public OWLOntologyID getRepresentedOntologyKey() {
+ return submitted;
+ }
+
+ public Set<String> getScopeHandles() {
+ Set<String> handles = new HashSet<String>();
+ for (OntologyCollector handle : this.handles)
+ if (handle instanceof OntologySpace) handles.add(handle.getID());
+ return handles;
+ }
+
+ public Set<String> getSessionHandles() {
+ Set<String> handles = new HashSet<String>();
+ for (OntologyCollector handle : this.handles)
+ if (handle instanceof Session) handles.add(handle.getID());
+ return handles;
+ }
+
+ public int getTotalAxioms() {
+ return o.getAxiomCount();
+ }
+
+ public String stringForm(OWLOntologyID ontologyID) {
+ return OntologyUtils.encode(ontologyID);
+ }
+ }
+
+ private Logger log = LoggerFactory.getLogger(getClass());
+
+ @Reference
+ protected ScopeManager onManager;
+
+ /*
+ * Placeholder for the OntologyProvider to be fetched from the servlet context.
+ */
+ @Reference
+ protected OntologyProvider<?> ontologyProvider;
+
+ /*
+ * Placeholder for the OntologyProvider to be fetched from the servlet context.
+ */
+ @Reference
+ protected RegistryManager registryManager;
+
+ @Reference
+ protected SessionManager sessionManager;
+
+ public RootResource() {
+ super();
+ }
+
+ /*
+ * TODO before implementing removal, we need OWL dependency checks. Also, this is quite a strong method
+ * and would be best implemented with RESTful authentication.
+ */
+ // @DELETE
+ public Response clear(@Context HttpHeaders headers) {
+ ResponseBuilder rb = Response.ok();
+ // addCORSOrigin(servletContext, rb, headers);
+ return rb.build();
+ }
+
+ @PUT
+ @Path("/{ontologyId:.+}")
+ public Response createOntologyEntry(@PathParam("ontologyId") String ontologyId,
+ @Context HttpHeaders headers,
+ @Context UriInfo uriInfo) {
+ OWLOntologyID key = OntologyUtils.decode(ontologyId);
+ ResponseBuilder rb;
+ if (ontologyProvider.listAllRegisteredEntries().contains(key)) {
+ rb = Response.status(CONFLICT);
+ } else {
+ ontologyProvider.createBlankOntologyEntry(key);
+ rb = Response.created(uriInfo.getRequestUri());
+ }
+ // addCORSOrigin(servletContext, rb, headers);
+ return rb.build();
+ }
+
+ @DELETE
+ @Path("/{ontologyId:.+}")
+ public Response deleteOntology(@PathParam("ontologyId") String ontologyId, @Context HttpHeaders headers) {
+ OWLOntologyID key = OntologyUtils.decode(ontologyId);
+ ResponseBuilder rb;
+ try {
+ if (!ontologyProvider.hasOntology(key)) {
+ rb = Response.status(NOT_FOUND);
+ } else {
+ try {
+ // TODO check aliases!
+ ontologyProvider.removeOntology(key);
+ rb = Response.ok();
+ } catch (OntologyHandleException e) {
+ rb = Response.status(CONFLICT);
+ }
+ }
+ } catch (OrphanOntologyKeyException e) {
+ log.warn("Orphan ontology key {}. No associated graph found in store.", e.getOntologyKey());
+ rb = Response.status(NOT_FOUND);
+ }
+ // addCORSOrigin(servletContext, rb, headers);
+ return rb.build();
+ }
+
+ public Set<String> getAliases(final OWLOntologyID ontologyId) {
+ // TODO use rdfViewable instead of Viewable to make separation of
+ // presentation and application logic cleaner
+ return AccessController.doPrivileged(new PrivilegedAction<Set<String>>() {
+ @Override
+ public Set<String> run() {
+ Set<String> aliases = new HashSet<String>();
+ for (OWLOntologyID alias : ontologyProvider.listAliases(ontologyId)) {
+ aliases.add(OntologyUtils.encode(alias));
+ }
+ return aliases;
+ }
+ });
+ }
+
+ private MGraph getGraph(String ontologyId, boolean merged, URI requestUri) {
+ long before = System.currentTimeMillis();
+
+ OWLOntologyID key = OntologyUtils.decode(ontologyId);
+
+ log.debug("Will try to retrieve ontology {} from provider.", key);
+ /*
+ * Export directly to MGraph since the OWLOntologyWriter uses (de-)serializing converters for the
+ * other formats.
+ *
+ * Use oTemp for the "real" graph and o for the graph that will be exported. This is due to the fact
+ * that in o we want to change import statements, but we do not want these changes to be stored
+ * permanently.
+ */
+ MGraph o = null, oTemp = null;
+ try {
+ oTemp = ontologyProvider.getStoredOntology(key, MGraph.class, merged);
+ } catch (Exception ex) {
+ log.warn("Retrieval of ontology with ID " + key + " failed.", ex);
+ }
+
+ if (oTemp == null) {
+ log.debug("Ontology {} missing from provider. Trying libraries...", key);
+ // TODO remove once registry supports OWLOntologyID as public key.
+ IRI iri = URIUtils.sanitize(IRI.create(ontologyId));
+ // See if we can touch a library. TODO: replace with event model on the ontology provider.
+ int minSize = -1;
+ IRI smallest = null;
+ for (Library lib : registryManager.getLibraries(iri)) {
+ int size = lib.getChildren().length;
+ if (minSize < 1 || size < minSize) {
+ smallest = lib.getIRI();
+ minSize = size;
+ }
+ }
+ if (smallest != null) {
+ log.debug("Selected library for ontology {} is {} .", iri, smallest);
+ try {
+ oTemp = registryManager.getLibrary(smallest).getOntology(iri, MGraph.class);
+ } catch (RegistryContentException e) {
+ log.warn("The content of library " + smallest + " could not be accessed.", e);
+ }
+ }
+ }
+
+ // This is needed because we need to change import statements. No need to use a more efficient but
+ // resource-intensive IndexedMGraph, since both o and oTemp will be GC'ed after serialization.
+ if (oTemp != null) {
+ o = new SimpleMGraph(oTemp);
+ }
+
+ if (o == null) {
+ log.debug("Ontology {} not found in any ontology provider or library.", ontologyId);
+ return null;
+ }
+
+ log.debug("Retrieved ontology {} .", ontologyId);
+
+ // Rewrite imports
+ String uri = uriInfo.getRequestUri().toString();
+ URI base = URI.create(uri.substring(0, uri.lastIndexOf(ontologyId) - 1));
+
+ // Rewrite import statements
+ /*
+ * TODO manage import rewrites better once the container ID is fully configurable (i.e. instead of
+ * going upOne() add "session" or "ontology" if needed).
+ */
+ Iterator<Triple> imports = o.filter(null, OWL.imports, null);
+ Set<Triple> oldImports = new HashSet<Triple>();
+ while (imports.hasNext()) {
+ oldImports.add(imports.next());
+ }
+ for (Triple t : oldImports) {
+ // construct new statement
+ String s = ((UriRef) t.getObject()).getUnicodeString();
+ if (s.contains("::")) {
+ s = s.substring(s.indexOf("::") + 2, s.length());
+ }
+ UriRef target = new UriRef(base + "/" + s);
+ o.add(new TripleImpl(t.getSubject(), OWL.imports, target));
+ // remove old statement
+ o.remove(t);
+ }
+
+ // Versioning.
+ OWLOntologyID id = OWLUtils.extractOntologyID(o);
+ if (id != null && !id.isAnonymous() && id.getVersionIRI() == null) {
+ UriRef viri = new UriRef(requestUri.toString());
+ log.debug("Setting version IRI for export : {}", viri);
+ o.add(new TripleImpl(new UriRef(id.getOntologyIRI().toString()), new UriRef(
+ OWL2Constants.OWL_VERSION_IRI), viri));
+ }
+
+ log.debug("Exported as Clerezza Graph in {} ms. Handing over to writer.", System.currentTimeMillis()
+ - before);
+ return o;
+ }
+
+ public Set<String> getHandles(final OWLOntologyID ontologyId) {
+ // TODO use rdfViewable instead of Vieable to make separation of
+ // presentation and application logic cleaner
+ return AccessController.doPrivileged(new PrivilegedAction<Set<String>>() {
+ @Override
+ public Set<String> run() {
+ Set<String> handles = new HashSet<String>();
+ if (onManager != null) {
+ for (Scope scope : onManager.getRegisteredScopes()) {
+ if (scope.getCoreSpace().hasOntology(ontologyId)
+ || scope.getCustomSpace().hasOntology(ontologyId)) {
+ handles.add(scope.getID());
+ }
+ }
+ }
+ if (sessionManager != null) {
+ for (String sesId : sessionManager.getRegisteredSessionIDs()) {
+ if (sessionManager.getSession(sesId).hasOntology(ontologyId)) {
+ handles.add(sesId);
+ }
+ }
+ }
+ return handles;
+ }
+ });
+
+ }
+
+ @GET
+ @Produces(TEXT_HTML)
+ public Response getHtmlInfo(@Context HttpHeaders headers) {
+ ResponseBuilder rb = Response.ok(new Viewable("index", this));
+ rb.header(HttpHeaders.CONTENT_TYPE, TEXT_HTML + "; charset=utf-8");
+ // addCORSOrigin(servletContext, rb, headers);
+ return rb.build();
+ }
+
+ public Response getMetadata(@PathParam("ontologyId") String ontologyId,
+ @Context UriInfo uriInfo,
+ @Context HttpHeaders headers) {
+ ResponseBuilder rb;
+ UriRef me = new UriRef(getPublicBaseUri() + "ontonet/" + ontologyId);
+ MGraph mGraph = new SimpleMGraph();
+ for (String alias : getAliases(OntologyUtils.decode(ontologyId))) {
+ mGraph.add(new TripleImpl(new UriRef(getPublicBaseUri() + "ontonet/" + alias), OWL.sameAs, me));
+ }
+ rb = Response.ok(mGraph);
+ // addCORSOrigin(servletContext, rb, headers);
+ return rb.build();
+ }
+
+ @GET
+ @Produces({RDF_XML, TURTLE, X_TURTLE, APPLICATION_JSON, RDF_JSON})
+ public Response getMetaGraph(@Context HttpHeaders headers) {
+ ResponseBuilder rb = Response.ok(ontologyProvider.getMetaGraph(Graph.class));
+ // addCORSOrigin(servletContext, rb, headers);
+ return rb.build();
+ }
+
+ public SortedSet<OWLOntologyID> getOntologies() {
+ // As this method is invoked from the template it would be too late
+ // to handle AccessControlExceptionS
+ // TODO use rdfViewable instead of Vieable to make separation of
+ // presentation and application logic cleaner
+ return AccessController.doPrivileged(new PrivilegedAction<SortedSet<OWLOntologyID>>() {
+ @Override
+ public SortedSet<OWLOntologyID> run() {
+ // No orphans included.
+ SortedSet<OWLOntologyID> filtered = new TreeSet<OWLOntologyID>();
+ Set<OWLOntologyID> orphans = ontologyProvider.listOrphans();
+ for (OWLOntologyID id : ontologyProvider.getPublicKeys()) {
+ if (id != null && !orphans.contains(id)) {
+ filtered.add(id);
+ }
+ }
+ return filtered;
+ }
+ });
+ }
+
+ public Set<OWLOntologyID> getOrphans() {
+ // As this method is invoked from the template it would be too late
+ // to handle AccessControlExceptionS
+ // TODO use rdfViewable instead of Vieable to make separation of
+ // presentation and application logic cleaner
+ return AccessController.doPrivileged(new PrivilegedAction<Set<OWLOntologyID>>() {
+
+ @Override
+ public Set<OWLOntologyID> run() {
+ return ontologyProvider.listOrphans();
+ }
+ });
+ }
+
+ private OWLOntology getOWLOntology(String ontologyId, boolean merge, URI requestUri) {
+ long before = System.currentTimeMillis();
+ IRI iri = URIUtils.sanitize(IRI.create(ontologyId));
+ log.debug("Will try to retrieve ontology {} from provider.", iri);
+ // TODO be selective: if the ontology is small enough, use OWLOntology otherwise export to Graph.
+ OWLOntology o = null;
+ try {
+ // XXX Guarantee that there MUST always be an entry for any decoded ontology ID submitted.
+ OWLOntologyID id = OntologyUtils.decode(ontologyId);
+ o = ontologyProvider.getStoredOntology(id, OWLOntology.class, merge);
+ } catch (Exception ex) {
+ log.warn("Retrieval of ontology with ID " + iri + " failed.", ex);
+ }
+
+ if (o == null) {
+ log.debug("Ontology {} missing from provider. Trying libraries...", iri);
+ // See if we can touch a library. TODO: replace with event model on the ontology provider.
+ int minSize = -1;
+ IRI smallest = null;
+ for (Library lib : registryManager.getLibraries(iri)) {
+ int size = lib.getChildren().length;
+ if (minSize < 1 || size < minSize) {
+ smallest = lib.getIRI();
+ minSize = size;
+ }
+ }
+ if (smallest != null) {
+ log.debug("Selected library for ontology {} is {} .", iri, smallest);
+ try {
+ o = registryManager.getLibrary(smallest).getOntology(iri, OWLOntology.class);
+ } catch (RegistryContentException e) {
+ log.warn("The content of library " + smallest + " could not be accessed.", e);
+ }
+ }
+ }
+
+ if (o == null) {
+ log.debug("Ontology {} not found in any ontology provider or library.", iri);
+ return null;
+ }
+
+ log.debug("Retrieved ontology {} .", iri);
+ // Rewrite import statements - no ontology collector to do it for us here.
+ URI base = URI.create(getPublicBaseUri() + "ontonet/");
+ List<OWLOntologyChange> changes = new ArrayList<OWLOntologyChange>();
+ OWLDataFactory df = o.getOWLOntologyManager().getOWLDataFactory();
+
+ // TODO manage import rewrites better once the container ID is fully configurable.
+ for (OWLImportsDeclaration oldImp : o.getImportsDeclarations()) {
+ changes.add(new RemoveImport(o, oldImp));
+ String s = oldImp.getIRI().toString();
+ if (s.contains("::")) {
+ s = s.substring(s.indexOf("::") + 2, s.length());
+ }
+ IRI target = IRI.create(base + s);
+ changes.add(new AddImport(o, df.getOWLImportsDeclaration(target)));
+ }
+
+ // Versioning.
+ OWLOntologyID id = o.getOntologyID();
+ if (!id.isAnonymous() && id.getVersionIRI() == null) {
+ IRI viri = IRI.create(requestUri);
+ log.debug("Setting version IRI for export : {}", viri);
+ changes.add(new SetOntologyID(o, new OWLOntologyID(id.getOntologyIRI(), viri)));
+ }
+
+ o.getOWLOntologyManager().applyChanges(changes);
+ log.debug("Exported as Clerezza Graph in {} ms. Handing over to writer.", System.currentTimeMillis()
+ - before);
+ return o;
+ }
+
+ public int getSize(final OWLOntologyID ontologyId) {
+ // TODO use rdfViewable instead of Viewable to make separation of
+ // presentation and application logic cleaner
+ return AccessController.doPrivileged(new PrivilegedAction<Integer>() {
+ @Override
+ public Integer run() {
+ return getDescriptor().getSize(ontologyId);
+ }
+ });
+
+ }
+
+ @GET
+ @Path("/{ontologyId:.+}")
+ @Produces(value = {APPLICATION_JSON, N3, N_TRIPLE, RDF_JSON})
+ public Response getStandaloneGraph(@PathParam("ontologyId") String ontologyId,
+ @DefaultValue("false") @QueryParam("meta") boolean meta,
+ @DefaultValue("false") @QueryParam("merge") boolean merged,
+ @Context UriInfo uriInfo,
+ @Context HttpHeaders headers) {
+
+ if (meta) {
+ return getMetadata(ontologyId, uriInfo, headers);
+ }
+
+ ResponseBuilder rb;
+ if (ontologyId == null || ontologyId.isEmpty()) {
+ rb = Response.status(BAD_REQUEST);
+ }
+ OWLOntologyID key = OntologyUtils.decode(ontologyId);
+ if (ontologyProvider.listOrphans().contains(key)) {
+ rb = Response.status(NO_CONTENT);
+ } else {
+ TripleCollection o = getGraph(ontologyId, merged, uriInfo.getRequestUri());
+ rb = o == null ? Response.status(NOT_FOUND) : Response.ok(o);
+ }
+ // addCORSOrigin(servletContext, rb, headers);
+ return rb.build();
+ }
+
+ /**
+ * Gets the ontology with the given identifier in its version managed by the session.
+ *
+ * @param sessionId
+ * the session identifier.
+ * @param ontologyId
+ * the ontology identifier.
+ * @param uriInfo
+ * @param headers
+ * @return the requested managed ontology, or {@link Status#NOT_FOUND} if either the sessionn does not
+ * exist, or the if the ontology either does not exist or is not managed.
+ */
+ @GET
+ @Path("/{ontologyId:.+}")
+ @Produces(value = {RDF_XML, TURTLE, X_TURTLE, MANCHESTER_OWL, FUNCTIONAL_OWL, OWL_XML, TEXT_PLAIN})
+ public Response getStandaloneOntology(@PathParam("ontologyId") String ontologyId,
+ @DefaultValue("false") @QueryParam("merge") boolean merged,
+ @Context UriInfo uriInfo,
+ @Context HttpHeaders headers) {
+ ResponseBuilder rb;
+ if (ontologyId == null || ontologyId.isEmpty()) {
+ rb = Response.status(BAD_REQUEST);
+ }
+ OWLOntologyID key = OntologyUtils.decode(ontologyId);
+ if (ontologyProvider.listOrphans().contains(key)) {
+ rb = Response.status(NO_CONTENT);
+ } else {
+ OWLOntology o = getOWLOntology(ontologyId, merged, uriInfo.getRequestUri());
+ rb = o == null ? Response.status(NOT_FOUND) : Response.ok(o);
+ }
+ // addCORSOrigin(servletContext, rb, headers);
+ return rb.build();
+ }
+
+ @POST
+ @Path("/{ontologyId:.+}")
+ @Consumes({MULTIPART_FORM_DATA})
+ @Produces({TEXT_HTML, TEXT_PLAIN, RDF_XML, TURTLE, X_TURTLE, N3})
+ public Response loadOntologyContent(@PathParam("ontologyId") String ontologyId,
+ MultiPartBody data,
+ @Context HttpHeaders headers) {
+ ResponseBuilder rb = performLoadOntology(data, headers,
+ Origin.create(OntologyUtils.decode(ontologyId)));
+ // rb.header(HttpHeaders.CONTENT_TYPE, TEXT_HTML + "; charset=utf-8");
+ // addCORSOrigin(servletContext, rb, headers);
+ return rb.build();
+ }
+
+ protected ResponseBuilder performLoadOntology(MultiPartBody data, HttpHeaders headers, Origin<?>... keys) {
+ log.debug(" post(MultiPartBody data)");
+ ResponseBuilder rb = null;
+
+ IRI location = null;
+ byte[] file = null; // If found, it takes precedence over location.
+ String format = null;
+ List<OWLOntologyID> aliases = new ArrayList<OWLOntologyID>();
+
+ if (data.getFormFileParameterValues("file").length > 0) {
+ file = data.getFormFileParameterValues("file")[0].getContent();
+ }
+ // else {
+ if (data.getTextParameterValues("format").length > 0) {
+ String value = data.getTextParameterValues("format")[0];
+ if (!value.equals("auto")) {
+ format = value;
+ }
+ }
+ if (data.getTextParameterValues("url").length > 0) {
+ String value = data.getTextParameterValues("url")[0];
+ try {
+ URI.create(value); // To throw 400 if malformed.
+ location = IRI.create(value);
+ } catch (Exception ex) {
+ log.error("Malformed IRI for " + value, ex);
+ throw new WebApplicationException(ex, BAD_REQUEST);
+ }
+ }
+ if (data.getTextParameterValues("alias").length > 0) {
+ for (String value : data.getTextParameterValues("alias")) {
+ if (!"null".equals(value)) {
+ try {
+ aliases.add(OntologyUtils.decode(value));
+ } catch (Exception ex) {
+ log.error("Malformed public key for " + value, ex);
+ throw new WebApplicationException(ex, BAD_REQUEST);
+ }
+ }
+ }
+ }
+
+ log.debug("Parameters:");
+ log.debug("file: {}", file != null && file.length > 0 ? "NOT-NULL" : "null");
+ log.trace("file data: {}", file);
+ log.debug("url: {}", location);
+ log.debug("format: {}", format);
+ log.debug("alias: {}", aliases);
+
+ // Then add the file
+ OWLOntologyID key = null;
+ if (file != null && file.length > 0) {
+
+ /*
+ * Because the ontology provider's load method could fail after only one attempt without resetting
+ * the stream, we might have to do that ourselves.
+ */
+ List<String> formats;
+ if (format != null && !format.trim().isEmpty()) {
+ formats = Collections.singletonList(format);
+ } else // The RESTful API has its own list of preferred formats
+ {
+ formats = Arrays.asList(RDF_XML, TURTLE, X_TURTLE, N3, N_TRIPLE, OWL_XML, FUNCTIONAL_OWL,
+ MANCHESTER_OWL, RDF_JSON);
+ }
+ log.debug("Will try {} supported formats", formats.size());
+ int unsupported = 0, failed = 0;
+ Iterator<String> itf = formats.iterator();
+ if (!itf.hasNext()) {
+ throw new OntologyLoadingException("No suitable format found or defined.");
+ }
+ do {
+ String f = itf.next();
+ try {
+ // Re-instantiate the stream on every attempt
+ InputStream content = new BufferedInputStream(new ByteArrayInputStream(file));
+ // ClerezzaOWLUtils.guessOntologyID(new FileInputStream(file), Parser.getInstance(), f);
+ OWLOntologyID guessed = OWLUtils.guessOntologyID(content, Parser.getInstance(), f);
+
+ if (guessed != null && !guessed.isAnonymous() && ontologyProvider.hasOntology(guessed)) {
+ rb = Response.status(Status.CONFLICT);
+ this.submitted = guessed;
+ if (headers.getAcceptableMediaTypes().contains(MediaType.TEXT_HTML_TYPE)) {
+ rb.entity(new Viewable("/imports/409.ftl", this));
+ rb.header(HttpHeaders.CONTENT_TYPE, MediaType.TEXT_HTML + "; charset=utf-8");
+ }
+ break;
+ } else {
+ content = new BufferedInputStream(new ByteArrayInputStream(file));
+ key = ontologyProvider.loadInStore(content, f, true, keys);
+ }
+ } catch (UnsupportedFormatException e) {
+ log.warn(
+ "POST method failed for media type {}. This should not happen (should fail earlier)",
+ headers.getMediaType());
+ // rb = Response.status(UNSUPPORTED_MEDIA_TYPE);
+ unsupported++;
+ } catch (IOException e) {
+ log.debug(">>> FAILURE format {} (I/O error)", f);
+ failed++;
+ }catch(ConcurrentModificationException e){
+ log.error("Exception logged", e);
+ failed++;
+ } catch (Exception e) { // SAXParseException and others
+ log.debug(">>> FAILURE format {} (parse error)", f);
+ log.debug("Caught exception {} : {}", e.getClass(), e.getLocalizedMessage());
+ log.trace("Exception logged", e);
+ failed++;
+ }
+ } while ((key == null/* || key.isAnonymous() */) && itf.hasNext());
+ if ((key == null || key.isAnonymous()) && rb == null) {
+ if (failed > 0) {
+ throw new WebApplicationException(BAD_REQUEST);
+ } else if (unsupported > 0) {
+ throw new WebApplicationException(UNSUPPORTED_MEDIA_TYPE);
+ }
+ }
+ } else if (location != null) {
+ try { // Here we try every format supported by the Java API
+ key = ontologyProvider.loadInStore(location, null, true, keys);
+ } catch (Exception e) {
+ log.error("Failed to load ontology from " + location, e);
+ Throwable cause = e.getCause();
+ String html = "<h1>400 Bad Request</h1>" + "<p>Failed to load ontology from <a href=\""
+ + location + "\" target=\"_blank\">" + location + "</a></p>";
+ if (cause != null) html += "<p>logged cause was: "
+ + cause.getLocalizedMessage().replace("<", "<")
+ .replace(">", ">") + "</p>";
+ return Response.status(BAD_REQUEST).type(TEXT_HTML).entity(html);
+ }
+ } else if (!aliases.isEmpty()) // No content but there are aliases.
+ {
+ for (Origin<?> origin : keys) {
+ if (origin.getReference() instanceof OWLOntologyID) {
+ OWLOntologyID primary = ((OWLOntologyID) origin.getReference());
+ if (ontologyProvider.getStatus(primary) != org.apache.stanbol.ontologymanager.servicesapi.ontology.OntologyProvider.Status.NO_MATCH) {
+ for (OWLOntologyID alias : aliases) {
+ try {
+ if (ontologyProvider.addAlias(primary, alias) && key == null) {
+ key = alias;
+ }
+ } catch (IllegalArgumentException ex) {
+ log.warn("Cannot add alias");
+ log.warn(" ... ontology key: {}", primary);
+ log.warn(" ... alias: {}", alias);
+ log.warn(" ... reason: ", ex);
+ continue;
+ }
+ }
+ }
+ }
+ }
+ } else {
+ log.error("Bad request");
+ log.error(" file is: {}", file);
+ throw new WebApplicationException(BAD_REQUEST);
+ }
+
+ if (key != null && !key.isAnonymous()) {
+ String uri = OntologyUtils.encode(key);
+ if (uri != null && !uri.isEmpty()) {
+ rb = Response.ok();
+ if (headers.getAcceptableMediaTypes().contains(MediaType.TEXT_HTML_TYPE)) {
+ rb.entity(new Viewable("index", this));
+ rb.header(HttpHeaders.CONTENT_TYPE, MediaType.TEXT_HTML + "; charset=utf-8");
+ }
+ } else {
+ rb = Response.ok();
+ }
+ } else if (rb == null) {
+ rb = Response.status(Status.INTERNAL_SERVER_ERROR);
+ }
+ return rb;
+ }
+
+ /**
+ * Helper method to make sure a ResponseBuilder is created on every conditions, so that it is then
+ * possible to enable CORS on it afterwards.
+ *
+ * @param ontologyId
+ * @return
+ */
+ protected ResponseBuilder performShowOntology(String ontologyId) {
+ if (ontologyId == null || ontologyId.isEmpty()) {
+ return Response.status(BAD_REQUEST);
+ }
+ OWLOntologyID key = OntologyUtils.decode(ontologyId);
+ if (ontologyProvider.listOrphans().contains(key)) {
+ return Response.status(NO_CONTENT);
+ }
+ OWLOntology o = getOWLOntology(ontologyId, false, uriInfo.getRequestUri());
+ if (o == null) {
+ return Response.status(NOT_FOUND);
+ }
+
+ // Assemble dependency list
+ Map<OWLOntologyID,OntologyProvider.Status> deps = new HashMap<OWLOntologyID,OntologyProvider.Status>();
+ for (OWLOntologyID dep : getDescriptor().getDependencies(key)) {
+ deps.put(dep, ontologyProvider.getStatus(dep));
+ }
+
+ Set<OntologyCollector> handles = new HashSet<OntologyCollector>();
+ if (onManager != null) {
+ for (Scope scope : onManager.getRegisteredScopes()) {
+ if (scope.getCoreSpace().hasOntology(key)) {
+ handles.add(scope.getCoreSpace());
+ }
+ if (scope.getCustomSpace().hasOntology(key)) {
+ handles.add(scope.getCustomSpace());
+ }
+ }
+ }
+ if (sessionManager != null) {
+ for (String sesId : sessionManager.getRegisteredSessionIDs()) {
+ if (sessionManager.getSession(sesId).hasOntology(key)) {
+ handles.add(sessionManager.getSession(sesId));
+ }
+ }
+ }
+ return Response.ok(new Viewable("ontology", new OntologyStats(uriInfo, key, o, ontologyProvider
+ .listAliases(key), deps, handles)));
+ }
+
+ @POST
+ @Consumes({MULTIPART_FORM_DATA})
+ @Produces({TEXT_HTML, TEXT_PLAIN, RDF_XML, TURTLE, X_TURTLE, N3})
+ public Response postOntology(MultiPartBody data, @Context HttpHeaders headers) {
+ ResponseBuilder rb = performLoadOntology(data, headers);
+ // rb.header(HttpHeaders.CONTENT_TYPE, TEXT_HTML + "; charset=utf-8");
+ // addCORSOrigin(servletContext, rb, headers);
+ return rb.build();
+ }
+
+ @GET
+ @Path("/{ontologyId:.+}")
+ @Produces(TEXT_HTML)
+ public Response showOntology(@PathParam("ontologyId") String ontologyId,
+ @Context HttpHeaders headers,
+ @Context UriInfo uriInfo) {
+ ResponseBuilder rb = performShowOntology(ontologyId);
+ rb.header(HttpHeaders.CONTENT_TYPE, TEXT_HTML + "; charset=utf-8");
+ // addCORSOrigin(servletContext, rb, headers);
+ return rb.build();
+ }
+
+ /**
+ * POSTs an ontology content as application/x-www-form-urlencoded
+ *
+ * @param content
+ * @param headers
+ * @return
+ */
+ @POST
+ @Consumes(value = {RDF_XML, TURTLE, X_TURTLE, N3, N_TRIPLE, OWL_XML, FUNCTIONAL_OWL, MANCHESTER_OWL,
+ RDF_JSON})
+ public Response storeOntology(InputStream content, @Context HttpHeaders headers) {
+ long before = System.currentTimeMillis();
+ ResponseBuilder rb;
+
+ MediaType mt = headers.getMediaType();
+ if (RDF_XML_TYPE.equals(mt) || TURTLE_TYPE.equals(mt) || X_TURTLE_TYPE.equals(mt)
+ || N3_TYPE.equals(mt) || N_TRIPLE_TYPE.equals(mt) || RDF_JSON_TYPE.equals(mt)) {
+ OWLOntologyID key = null;
+ try {
+ key = ontologyProvider.loadInStore(content, headers.getMediaType().toString(), true);
+ rb = Response.ok();
+ } catch (UnsupportedFormatException e) {
+ log.warn(
+ "POST method failed for media type {}. This should not happen (should fail earlier)",
+ headers.getMediaType());
+ rb = Response.status(UNSUPPORTED_MEDIA_TYPE);
+ } catch (IOException e) {
+ throw new WebApplicationException(e, BAD_REQUEST);
+ }
+ // An exception should have been thrown earlier, but just in case.
+ if (key == null || key.isAnonymous()) {
+ rb = Response.status(Status.INTERNAL_SERVER_ERROR);
+ }
+ } else if (OWL_XML_TYPE.equals(mt) || FUNCTIONAL_OWL_TYPE.equals(mt)
+ || MANCHESTER_OWL_TYPE.equals(mt)) {
+ try {
+ OntologyInputSource<OWLOntology> src = new OntologyContentInputSource(content);
+ ontologyProvider.loadInStore(src.getRootOntology(), true);
+ rb = Response.ok();
+ } catch (OWLOntologyCreationException e) {
+ throw new WebApplicationException(e, INTERNAL_SERVER_ERROR);
+ }
+ } else {
+ rb = Response.status(UNSUPPORTED_MEDIA_TYPE);
+ }
+
+ // addCORSOrigin(servletContext, rb, headers);
+ Response r = rb.build();
+ log.debug("POST request for ontology addition completed in {} ms with status {}.",
+ (System.currentTimeMillis() - before), r.getStatus());
+ return r;
+ }
+}
Added: stanbol/trunk/ontologymanager/web/src/main/resources/templates/html/org/apache/stanbol/ontologymanager/web/resources/RootResource/conflict.ftl
URL: http://svn.apache.org/viewvc/stanbol/trunk/ontologymanager/web/src/main/resources/templates/html/org/apache/stanbol/ontologymanager/web/resources/RootResource/conflict.ftl?rev=1686278&view=auto
==============================================================================
--- stanbol/trunk/ontologymanager/web/src/main/resources/templates/html/org/apache/stanbol/ontologymanager/web/resources/RootResource/conflict.ftl (added)
+++ stanbol/trunk/ontologymanager/web/src/main/resources/templates/html/org/apache/stanbol/ontologymanager/web/resources/RootResource/conflict.ftl Thu Jun 18 17:10:58 2015
@@ -0,0 +1,17 @@
+<#--
+ Licensed to the Apache Software Foundation (ASF) under one or more
+ contributor license agreements. See the NOTICE file distributed with
+ this work for additional information regarding copyright ownership.
+ The ASF licenses this file to You under the Apache License, Version 2.0
+ (the "License"); you may not use this file except in compliance with
+ the License. You may obtain a copy of the License at
+
+ http://www.apache.org/licenses/LICENSE-2.0
+
+ Unless required by applicable law or agreed to in writing, software
+ distributed under the License is distributed on an "AS IS" BASIS,
+ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ See the License for the specific language governing permissions and
+ limitations under the License.
+-->
+<#include "/imports/409.ftl">
\ No newline at end of file
Added: stanbol/trunk/ontologymanager/web/src/main/resources/templates/html/org/apache/stanbol/ontologymanager/web/resources/RootResource/index.ftl
URL: http://svn.apache.org/viewvc/stanbol/trunk/ontologymanager/web/src/main/resources/templates/html/org/apache/stanbol/ontologymanager/web/resources/RootResource/index.ftl?rev=1686278&view=auto
==============================================================================
--- stanbol/trunk/ontologymanager/web/src/main/resources/templates/html/org/apache/stanbol/ontologymanager/web/resources/RootResource/index.ftl (added)
+++ stanbol/trunk/ontologymanager/web/src/main/resources/templates/html/org/apache/stanbol/ontologymanager/web/resources/RootResource/index.ftl Thu Jun 18 17:10:58 2015
@@ -0,0 +1,95 @@
+<#--
+ Licensed to the Apache Software Foundation (ASF) under one or more
+ contributor license agreements. See the NOTICE file distributed with
+ this work for additional information regarding copyright ownership.
+ The ASF licenses this file to You under the Apache License, Version 2.0
+ (the "License"); you may not use this file except in compliance with
+ the License. You may obtain a copy of the License at
+
+ http://www.apache.org/licenses/LICENSE-2.0
+
+ Unless required by applicable law or agreed to in writing, software
+ distributed under the License is distributed on an "AS IS" BASIS,
+ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ See the License for the specific language governing permissions and
+ limitations under the License.
+-->
+<#import "/imports/common.ftl" as common>
+<#import "/imports/ontonetDescription.ftl" as ontonetDescription>
+
+<#escape x as x?html>
+ <@common.page title="Apache Stanbol OntoNet" hasrestapi=true>
+
+ <p>
+ Stanbol OntoNet implements the API section for managing OWL/OWL2 ontologies, in order to prepare them for consumption by reasoning services, refactorers, rule engines and the like. Once loaded internally from their remote or local resources, ontologies live and are known within the realm they were loaded in. This allows loose-coupling and (de-)activation of ontologies in order to scale the data sets for reasoners to process and optimize them for efficiency.
+ </p>
+
+ <span style="font-style:italic">From here you can reach the following sub-endpoints:</span>
+ <ul>
+ <li><b><a href="${it.publicBaseUri}ontonet/ontology" title="Apache Stanbol OntoNet Scope Manager">Scope Manager</a></b></li>
+ <li><b><a href="${it.publicBaseUri}ontonet/session" title="Apache Stanbol OntoNet Session Manager">Session Manager</a></b></li>
+ <li><b><a href="${it.publicBaseUri}ontonet/registry" title="Apache Stanbol OntoNet Ontology Libraries">Ontology Libraries</a></b></li>
+ </ul>
+
+ <div class="panel" id="webview">
+ <#include "webview.ftl">
+ </div>
+
+ <div class="panel" id="restapi" style="display: none;">
+
+ <h3>Service Endpoints</h3>
+
+ <p>The RESTful API of the Ontology Network Manager is structured as follows.</p>
+
+ <ul>
+ <li>Homepage @<a href="${it.publicBaseUri}ontonet">/ontonet</a>:
+ This page.
+ </li>
+ </ul>
+
+ <h4>Ontology Scope Management (<code>"/ontonet/ontology"</code>):</h4>
+
+ <ul>
+ <li>Scope manager @<a href="${it.publicBaseUri}ontonet/ontology">/ontonet/ontology</a>:
+ Perform CRUD operations on ontology scopes.
+ </li>
+ <li>Ontology scope @<code>/ontonet/ontology/{scopeName}</code>:
+ Manage the set of ontologies loaded within a single scope.
+ </li>
+<!--
+ <li>Ontology retrieval <a href="${it.publicBaseUri}ontonet/ontology/get">/ontonet/ontology/get</a>:
+ Manage ontologies whose ID is known but not the scope(s) using it.
+ </li>
+-->
+ <li>Ontology within scope @<code>/ontonet/ontology/{scopeName}/{ontologyID}</code>:
+ Load/Unload operations on a single ontology loaded within a scope.
+ </li>
+ </ul>
+
+ <h4>OntoNet Session Management (<code>"/ontonet/session"</code>):</h4>
+
+ <ul>
+ <li>Session registry @<a href="${it.publicBaseUri}ontonet/session">/ontonet/session</a>:
+ Perform CRUD operations on ontology sessions.
+ </li>
+ <li>OntoNet Session @<code>/ontonet/session/{sessionId}</code>:
+ Manage metadata for a single OntoNet session.
+ </li>
+ </ul>
+<!--
+ <h4>Graph Management (<code>"/ontonet/graphs"</code>):</h4>
+
+ <ul>
+ <li>Graph storage @<a href="${it.publicBaseUri}ontonet/graphs">/ontonet/graphs</a>:
+ Storage and retrieval operation of RDF graphs, scope-independent.
+ </li>
+ </ul>
+-->
+ <hr>
+ <#include "/imports/inc_scopemgr.ftl">
+ <#include "/imports/inc_scope.ftl">
+ <#include "/imports/inc_sessionmgr.ftl">
+ </div>
+
+ </...@common.page>
+</#escape>
\ No newline at end of file
Added: stanbol/trunk/ontologymanager/web/src/main/resources/templates/html/org/apache/stanbol/ontologymanager/web/resources/RootResource/ontology.ftl
URL: http://svn.apache.org/viewvc/stanbol/trunk/ontologymanager/web/src/main/resources/templates/html/org/apache/stanbol/ontologymanager/web/resources/RootResource/ontology.ftl?rev=1686278&view=auto
==============================================================================
--- stanbol/trunk/ontologymanager/web/src/main/resources/templates/html/org/apache/stanbol/ontologymanager/web/resources/RootResource/ontology.ftl (added)
+++ stanbol/trunk/ontologymanager/web/src/main/resources/templates/html/org/apache/stanbol/ontologymanager/web/resources/RootResource/ontology.ftl Thu Jun 18 17:10:58 2015
@@ -0,0 +1,79 @@
+<#--
+ Licensed to the Apache Software Foundation (ASF) under one or more
+ contributor license agreements. See the NOTICE file distributed with
+ this work for additional information regarding copyright ownership.
+ The ASF licenses this file to You under the Apache License, Version 2.0
+ (the "License"); you may not use this file except in compliance with
+ the License. You may obtain a copy of the License at
+
+ http://www.apache.org/licenses/LICENSE-2.0
+
+ Unless required by applicable law or agreed to in writing, software
+ distributed under the License is distributed on an "AS IS" BASIS,
+ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ See the License for the specific language governing permissions and
+ limitations under the License.
+-->
+<#import "/imports/common.ftl" as common>
+<#escape x as x?html>
+<@common.page title="Ontology Manager : Ontology Detail" hasrestapi=false>
+
+ <div class="panel">
+ <div>
+ Aliases:
+ <ul>
+ <#list it.aliases as alias>
+ <li><a href=${it.publicBaseUri}ontonet/${alias}>${alias}</a></li>
+ </#list>
+ </ul>
+
+ Direct dependencies:
+ <ul>
+ <#list it.dependencies?keys as dep>
+ <li><a href=${it.publicBaseUri}ontonet/${dep}>${dep}</a>
+ <#if it.dependencies[dep] == "NO_MATCH">
+ (not loaded)
+ </#if>
+ </li>
+ </#list>
+ </ul>
+
+ Handles:
+ <ul>
+ <#list it.scopeHandles as handle>
+ <li>${handle}</li>
+ </#list>
+ <#list it.sessionHandles as handle>
+ <li>Session ${handle}</li>
+ </#list>
+ </ul>
+ </div>
+ <#--
+ <pre>${it.result}</pre>
+ -->
+ </div>
+
+ <ul class="downloadLinks">
+<li>
+ Output format:
+ <select onChange="javascript:setFormat();" id="selectFormat">
+ <option value="application/json">JSON-LD</option>
+ <option value="application/owl+xml">OWL/XML</option>
+ <option value="application/rdf+xml">RDF/XML</option>
+ <option value="application/rdf+json">RDF/JSON</option>
+ <option value="text/owl-functional">OWL Functional Syntax</option>
+ <option value="text/owl-manchester">Manchester OWL Syntax</option>
+ <option value="text/rdf+n3">N3</option>
+ <option value="text/rdf+nt">N-Triples</option>
+ <option value="text/turtle" selected>Turtle</option>
+ </select>
+ <a id="downloadOntology" href="${it.requestUri}?header_Accept=text%2Fturtle" class="downloadRDF" download="${it.stringForm(it.representedOntologyKey)}.rdf">Download raw ontology</a>
+</li>
+</ul>
+
+</...@common.page>
+</#escape>
+
+<script>
+function setFormat(){var format=$("#selectFormat").val();$("#downloadOntology").attr("href","${it.requestUri}?header_Accept="+encodeURIComponent(format));var extn;switch(format){case"application/json":case"application/rdf+json":extn=".json";break;case"application/owl+xml":case"text/owl-functional":case"text/owl-manchester":extn=".owl";break;case"application/rdf+xml":case"text/turtle":extn=".rdf";break;case"text/rdf+n3":extn=".n3";break;case"text/rdf+nt":default:extn=".nt"}$("#downloadOntology").attr("download","${it.stringForm(it.representedOntologyKey)}"+extn)}
+</script>
\ No newline at end of file
Added: stanbol/trunk/ontologymanager/web/src/main/resources/templates/html/org/apache/stanbol/ontologymanager/web/resources/RootResource/webview.ftl
URL: http://svn.apache.org/viewvc/stanbol/trunk/ontologymanager/web/src/main/resources/templates/html/org/apache/stanbol/ontologymanager/web/resources/RootResource/webview.ftl?rev=1686278&view=auto
==============================================================================
--- stanbol/trunk/ontologymanager/web/src/main/resources/templates/html/org/apache/stanbol/ontologymanager/web/resources/RootResource/webview.ftl (added)
+++ stanbol/trunk/ontologymanager/web/src/main/resources/templates/html/org/apache/stanbol/ontologymanager/web/resources/RootResource/webview.ftl Thu Jun 18 17:10:58 2015
@@ -0,0 +1,129 @@
+<#--
+ Licensed to the Apache Software Foundation (ASF) under one or more
+ contributor license agreements. See the NOTICE file distributed with
+ this work for additional information regarding copyright ownership.
+ The ASF licenses this file to You under the Apache License, Version 2.0
+ (the "License"); you may not use this file except in compliance with
+ the License. You may obtain a copy of the License at
+
+ http://www.apache.org/licenses/LICENSE-2.0
+
+ Unless required by applicable law or agreed to in writing, software
+ distributed under the License is distributed on an "AS IS" BASIS,
+ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ See the License for the specific language governing permissions and
+ limitations under the License.
+-->
+
+ <!-- FIXME class names should be generic, and not bound to a specific functionality (here engines->reasoning services)-->
+ <div class="enginelisting">
+ <div class="collapsed">
+ <p class="collapseheader"><b>Load an ontology</b></p>
+ <div class="collapsable">
+ <br/>
+
+ <form method="POST" enctype="multipart/form-data" accept-charset="utf-8">
+ <fieldset>
+ <legend>From a local file</legend>
+ <p><b>File:</b> <input type="file" name="file"/>
+ Input format:
+ <select name="format">
+ <option value="auto">Auto</option>
+ <option value="application/rdf+xml">RDF/XML</option>
+ <option value="application/rdf+json">RDF/JSON</option>
+ <option value="text/turtle">Turtle</option>
+ <option value="text/rdf+nt">N-Triple</option>
+ <option value="text/rdf+n3">N3</option>
+ <!--
+ <option value="application/owl+xml">OWL/XML</option>
+ <option value="text/owl-manchester">Manchester OWL</option>
+ <option value="text/owl-functional">OWL Functional</option>
+ -->
+ </select>
+ <input type="submit" value="Send"/>
+ </p>
+ </fieldset>
+ </form>
+
+ <form method="POST" enctype="multipart/form-data" accept-charset="utf-8">
+ <fieldset>
+ <legend>From a URL</legend>
+ <p>
+ <b>URL:</b> <input type="text" name="url" size="80" value="http://"/>
+ <input type="submit" value="Fetch"/>
+ </p>
+ </fieldset>
+ </form>
+
+ Note: OWL import targets will be included. Ontology loading is set to fail on missing imports.
+
+ </div>
+ </div>
+ </div>
+
+ <script>
+ $(".collapseheader").click(function () {
+ $(this).parents("div").toggleClass("collapsed");
+ });
+ </script>
+
+ <h3>Stored ontologies</h3>
+ <#assign ontologies = it.ontologies>
+ <div class="storeContents">
+ <table id="allOntologies">
+ <div>
+ <tr>
+ <th width="90%">ID</th>
+ <th width="5%">Triples</th>
+ <th width="5%">Aliases</th>
+ <th width="5%">Direct handles</th>
+ </tr>
+ <#list ontologies as ontology>
+ <tr>
+ <td><a href="${it.publicBaseUri}ontonet/${it.stringForm(ontology)}">${it.stringForm(ontology)}</a></td>
+ <td>${it.getSize(ontology)}</td>
+ <td>${it.getAliases(ontology)?size}</td>
+ <td>${it.getHandles(ontology)?size}</td>
+ </tr>
+ </#list>
+ </div>
+ </table> <!-- allOntologies -->
+ </div>
+
+ <h3>Orphan ontologies</h3>
+ <#assign orphans = it.orphans>
+ <div class="storeContents">
+ <table id="orphans">
+ <div>
+ <tr>
+ <th width="90%">ID</th>
+ <th width="5%">Aliases</th>
+ <th width="5%">Direct handles</th>
+ </tr>
+ <#list orphans as orphan>
+ <tr>
+ <td><strike>${it.stringForm(orphan)}</strike></td>
+ <td>${it.getAliases(orphan)?size}</td>
+ <td>${it.getHandles(orphan)?size}</td>
+ </tr>
+ </#list>
+ </div>
+ </table> <!-- orphans -->
+ </div>
+
+ <hr>
+
+ <p>
+ The following concepts have been introduced along with the Ontology Network Manager:
+ <ul>
+ <li>
+ <u><em>Scope</em></u>: a "logical realm" for all the ontologies that encompass a certain CMS-related set of concepts (such as "User", "ACL", "Event", "Content", "Domain", "Reengineering", "Community", "Travelling" etc.). Scopes never inherit from each other, though they can load the same ontologies if need be.
+ </li>
+ <li>
+ <u><em>Space</em></u>: an access-restricted container for synchronized access to ontologies within a scope. The ontologies in a scope are loaded within its set of spaces. An ontology scope contains: (a) exactly one <em>core space</em>, which contains the immutable set of essential ontologies that describe the scope; (b) exactly one (possibly empty) <em>custom space</em>, which extends the core space according to specific CMS needs (e.g. the core space for the User scope may contains alignments to FOAF).
+ </li>
+ <li>
+ <em><u>Session</u></em>: a collector of volatile semantic data, not intended for persistent storage. Sessions can be used for stateful management of ontology networks. It is not equivalent to an HTTP session (since it can live persistently across multiple HTTP sessions), although its behaviour can reflect the one of the HTTP session that created it, if required by the implementation.
+ </li>
+ </ul>
+ </p>