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Posted to reviews@spark.apache.org by "hgs19921112 (via GitHub)" <gi...@apache.org> on 2023/08/21 07:54:24 UTC

[GitHub] [spark] hgs19921112 opened a new pull request, #42572: [SPARK-44881[COMMON]Executor stucked on retrying to fetch shuffle data when `java.lang.OutOfMemoryError. unable to create native thread` exception occurred.

hgs19921112 opened a new pull request, #42572:
URL: https://github.com/apache/spark/pull/42572

   ## Executor stucked on retrying to fetch shuffle data when `java.lang.OutOfMemoryError. unable to create native thread` exception occurred.
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   ### What changes were proposed in this pull request?
   No.
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   ### Why are the changes needed?
   Avoid executor stucks.
   The reason why executor stucked is because in `RetryingBlockTransferor#initiateRetry`
   failed to create native thread when execute code `executorService.submit`.But the 
   member `currentListener` in `RetryingBlockTransferor` has changed before the retry
   submit. But the Exception occurred in the old `currentListener`. But in `RetryingBlockTransferor.RetryingBlockTransferListener#handleBlockTransferFailure` will
   judge `this == currentListener` , but `this` is the old one , so `this` not equals `currentListener`.
   The `RetryingBlockTransferListener` can not forward the failure to `BlockFetchingListener` in
   `ShuffleBlockFetcherIterator`. And `ShuffleBlockFetcherIterator` can not get data from `ShuffleBlockFetcherIterator#results`.
   Then it happened.
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   ### Does this PR introduce _any_ user-facing change?
   No.
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   ### How was this patch tested?
   By  orginal spark unit tests.
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   No.
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[GitHub] [spark] hgs19921112 closed pull request #42572: [SPARK-44881[COMMON]Executor stucked on retrying to fetch shuffle data when `java.lang.OutOfMemoryError. unable to create native thread` exception occurred.

Posted by "hgs19921112 (via GitHub)" <gi...@apache.org>.
hgs19921112 closed pull request #42572: [SPARK-44881[COMMON]Executor stucked on retrying to fetch shuffle data when `java.lang.OutOfMemoryError. unable to create native thread` exception occurred.
URL: https://github.com/apache/spark/pull/42572


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[GitHub] [spark] hgs19921112 commented on pull request #42572: [SPARK-44881[COMMON]Executor stucked on retrying to fetch shuffle data when `java.lang.OutOfMemoryError. unable to create native thread` exception occurred.

Posted by "hgs19921112 (via GitHub)" <gi...@apache.org>.
hgs19921112 commented on PR #42572:
URL: https://github.com/apache/spark/pull/42572#issuecomment-1685202927

   The reason why executor stucked is because in `RetryingBlockTransferor#initiateRetry`
   failed to create native thread. But the member `currentListener` in RetryingBlockTransferor
   has changed before the retry submit. But the Exception occurred in the old `currentListener`.
   But int `RetryingBlockTransferor.RetryingBlockTransferListener#handleBlockTransferFailure` will
   judge `this == currentListener` , but `this` is the old one , so `this` not equals `currentListener`.
   Then it happed.
   @mridulm 
   


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[GitHub] [spark] hgs19921112 closed pull request #42572: [SPARK-44881[COMMON]Executor stucked on retrying to fetch shuffle data when `java.lang.OutOfMemoryError. unable to create native thread` exception occurred.

Posted by "hgs19921112 (via GitHub)" <gi...@apache.org>.
hgs19921112 closed pull request #42572: [SPARK-44881[COMMON]Executor stucked on retrying to fetch shuffle data when `java.lang.OutOfMemoryError. unable to create native thread` exception occurred.
URL: https://github.com/apache/spark/pull/42572


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[GitHub] [spark] hdaikoku commented on pull request #42572: [SPARK-44881[COMMON]Executor stucked on retrying to fetch shuffle data when `java.lang.OutOfMemoryError. unable to create native thread` exception occurred.

Posted by "hdaikoku (via GitHub)" <gi...@apache.org>.
hdaikoku commented on PR #42572:
URL: https://github.com/apache/spark/pull/42572#issuecomment-1685554405

   This seems to be the same issue as https://github.com/apache/spark/pull/42426
   


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[GitHub] [spark] hgs19921112 commented on pull request #42572: [SPARK-44881[COMMON]Executor stucked on retrying to fetch shuffle data when `java.lang.OutOfMemoryError. unable to create native thread` exception occurred.

Posted by "hgs19921112 (via GitHub)" <gi...@apache.org>.
hgs19921112 commented on PR #42572:
URL: https://github.com/apache/spark/pull/42572#issuecomment-1685823726

   > This seems to be the same issue as #42426
   
   Yes.


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Re: [PR] [SPARK-44881[COMMON]Executor stucked on retrying to fetch shuffle data when `java.lang.OutOfMemoryError. unable to create native thread` exception occurred. [spark]

Posted by "fengDianDemaNong (via GitHub)" <gi...@apache.org>.
fengDianDemaNong commented on PR #42572:
URL: https://github.com/apache/spark/pull/42572#issuecomment-1833303013

   [0.025s][warning][os,thread] Failed to start thread "Unknown thread" - pthread_create failed (EAGAIN) for attributes: stacksize: 1024k, guardsize: 0k, detached.
   Error occurred during initialization of VM
   java.lang.OutOfMemoryError: unable to create native thread: possibly out of memory or process/resource limits reached
   /opt/spark/bin/spark-class: line 96: CMD: bad array subscript 
   
   
   I have also encountered this issue several times during Spark on k8s. Is there a solution


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[GitHub] [spark] mridulm commented on pull request #42572: [SPARK-44881[COMMON]Executor stucked on retrying to fetch shuffle data when `java.lang.OutOfMemoryError. unable to create native thread` exception occurred.

Posted by "mridulm (via GitHub)" <gi...@apache.org>.
mridulm commented on PR #42572:
URL: https://github.com/apache/spark/pull/42572#issuecomment-1685194014

   Why would this help ? Please add more details to the description.
   
   If this is still work in progress, please mark it as draft.


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[GitHub] [spark] hgs19921112 commented on pull request #42572: [SPARK-44881[COMMON]Executor stucked on retrying to fetch shuffle data when `java.lang.OutOfMemoryError. unable to create native thread` exception occurred.

Posted by "hgs19921112 (via GitHub)" <gi...@apache.org>.
hgs19921112 commented on PR #42572:
URL: https://github.com/apache/spark/pull/42572#issuecomment-1685202521

   > Why would this help ? Please add more details to the description.
   > 
   > If this is still work in progress, please mark it as draft.
   The reason why executor stucked is because in `RetryingBlockTransferor#initiateRetry`
   failed to create native thread. But the member `currentListener` in RetryingBlockTransferor
   has changed before the retry submit. But the Exception occurred in the old `currentListener`.
   But int `RetryingBlockTransferor.RetryingBlockTransferListener#handleBlockTransferFailure` will
   judge `this == currentListener` , but `this` is the old one , so `this` not equals `currentListener`.
   Then it happed.
   
   


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