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Posted to issues@airavata.apache.org by "Eroma (JIRA)" <ji...@apache.org> on 2015/06/10 22:51:00 UTC
[jira] [Commented] (AIRAVATA-1725) When GFAC is stopped and started
while experiments are launched in PGA getting Bad GFAC version error and
exp fails
[ https://issues.apache.org/jira/browse/AIRAVATA-1725?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=14581055#comment-14581055 ]
Eroma commented on AIRAVATA-1725:
---------------------------------
Several LoneStar experiments failed with the above error. Experiment is FAILED and job state is QUEUED in PGA. Job is also queued in the resource as well.
> When GFAC is stopped and started while experiments are launched in PGA getting Bad GFAC version error and exp fails
> -------------------------------------------------------------------------------------------------------------------
>
> Key: AIRAVATA-1725
> URL: https://issues.apache.org/jira/browse/AIRAVATA-1725
> Project: Airavata
> Issue Type: Sub-task
> Components: GFac
> Environment: http://dev.test-drive.airavata.org/portal/ultrascan-testing/public
> Reporter: Eroma
> Assignee: Shameera Rathnayaka
>
> Steps
> Similar to above parent task
> When the GFAC server is started immediately number of experiments failed with error [1]. Experiment status is FAILED and job status is QUEUED
> [1]
> org.apache.airavata.gfac.GFacException: Error Invoking Handlers:KeeperErrorCode = BadVersion for /gfac-experiments/gfac-node1/SLM1-US-LoneStar-06-09_17-10-24_68c1219a-9652-4a1c-b983-d43cbc7f1f18/org.apache.airavata.gfac.ssh.handler.SSHDirectorySetupHandler/state org.apache.airavata.gfac.GFacException: Error launching the Job at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:480) at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:179) at org.apache.airavata.gfac.core.utils.InputHandlerWorker.run(InputHandlerWorker.java:47) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) at java.lang.Thread.run(Thread.java:745) Caused by: org.apache.airavata.gfac.GFacException: Error Invoking Handlers:KeeperErrorCode = BadVersion for /gfac-experiments/gfac-node1/SLM1-US-LoneStar-06-09_17-10-24_68c1219a-9652-4a1c-b983-d43cbc7f1f18/org.apache.airavata.gfac.ssh.handler.SSHDirectorySetupHandler/state at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.launch(BetterGfacImpl.java:718) at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:467) ... 5 more Caused by: org.apache.airavata.gfac.GFacException: Error Invoking Handlers:KeeperErrorCode = BadVersion for /gfac-experiments/gfac-node1/SLM1-US-LoneStar-06-09_17-10-24_68c1219a-9652-4a1c-b983-d43cbc7f1f18/org.apache.airavata.gfac.ssh.handler.SSHDirectorySetupHandler/state at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.invokeInFlowHandlers(BetterGfacImpl.java:885) at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.launch(BetterGfacImpl.java:661) ... 6 more Caused by: org.apache.zookeeper.KeeperException$BadVersionException: KeeperErrorCode = BadVersion for /gfac-experiments/gfac-node1/SLM1-US-LoneStar-06-09_17-10-24_68c1219a-9652-4a1c-b983-d43cbc7f1f18/org.apache.airavata.gfac.ssh.handler.SSHDirectorySetupHandler/state at org.apache.zookeeper.KeeperException.create(KeeperException.java:115) at org.apache.zookeeper.KeeperException.create(KeeperException.java:51) at org.apache.zookeeper.ZooKeeper.setData(ZooKeeper.java:1228) at org.apache.curator.framework.imps.SetDataBuilderImpl$4.call(SetDataBuilderImpl.java:274) at org.apache.curator.framework.imps.SetDataBuilderImpl$4.call(SetDataBuilderImpl.java:270) at org.apache.curator.RetryLoop.callWithRetry(RetryLoop.java:107) at org.apache.curator.framework.imps.SetDataBuilderImpl.pathInForeground(SetDataBuilderImpl.java:267) at org.apache.curator.framework.imps.SetDataBuilderImpl.forPath(SetDataBuilderImpl.java:253) at org.apache.curator.framework.imps.SetDataBuilderImpl.forPath(SetDataBuilderImpl.java:41) at org.apache.airavata.gfac.core.utils.GFacUtils.createHandlerZnode(GFacUtils.java:332) at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.invokeInFlowHandlers(BetterGfacImpl.java:858) ... 7 more org.apache.airavata.gfac.GFacException: Error Invoking Handlers:KeeperErrorCode = NoNode for /gfac-experiments/gfac-node1/SLM1-US-LoneStar-06-09_17-10-24_68c1219a-9652-4a1c-b983-d43cbc7f1f18/org.apache.airavata.gfac.ssh.handler.AdvancedSCPInputHandler org.apache.airavata.gfac.GFacException: Error launching the Job at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:480) at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:179) at org.apache.airavata.gfac.core.utils.InputHandlerWorker.run(InputHandlerWorker.java:47) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) at java.lang.Thread.run(Thread.java:745) Caused by: org.apache.airavata.gfac.GFacException: Error Invoking Handlers:KeeperErrorCode = NoNode for /gfac-experiments/gfac-node1/SLM1-US-LoneStar-06-09_17-10-24_68c1219a-9652-4a1c-b983-d43cbc7f1f18/org.apache.airavata.gfac.ssh.handler.AdvancedSCPInputHandler at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.launch(BetterGfacImpl.java:718) at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:467) ... 5 more Caused by: org.apache.airavata.gfac.GFacException: Error Invoking Handlers:KeeperErrorCode = NoNode for /gfac-experiments/gfac-node1/SLM1-US-LoneStar-06-09_17-10-24_68c1219a-9652-4a1c-b983-d43cbc7f1f18/org.apache.airavata.gfac.ssh.handler.AdvancedSCPInputHandler at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.invokeInFlowHandlers(BetterGfacImpl.java:885) at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.launch(BetterGfacImpl.java:661) ... 6 more Caused by: org.apache.zookeeper.KeeperException$NoNodeException: KeeperErrorCode = NoNode for /gfac-experiments/gfac-node1/SLM1-US-LoneStar-06-09_17-10-24_68c1219a-9652-4a1c-b983-d43cbc7f1f18/org.apache.airavata.gfac.ssh.handler.AdvancedSCPInputHandler at org.apache.zookeeper.KeeperException.create(KeeperException.java:111) at org.apache.zookeeper.KeeperException.create(KeeperException.java:51) at org.apache.zookeeper.ZooKeeper.create(ZooKeeper.java:778) at org.apache.curator.framework.imps.CreateBuilderImpl$11.call(CreateBuilderImpl.java:696) at org.apache.curator.framework.imps.CreateBuilderImpl$11.call(CreateBuilderImpl.java:679) at org.apache.curator.RetryLoop.callWithRetry(RetryLoop.java:107) at org.apache.curator.framework.imps.CreateBuilderImpl.pathInForeground(CreateBuilderImpl.java:676) at org.apache.curator.framework.imps.CreateBuilderImpl.protectedPathInForeground(CreateBuilderImpl.java:453) at org.apache.curator.framework.imps.CreateBuilderImpl.forPath(CreateBuilderImpl.java:443) at org.apache.curator.framework.imps.CreateBuilderImpl$3.forPath(CreateBuilderImpl.java:251) at org.apache.curator.framework.imps.CreateBuilderImpl$3.forPath(CreateBuilderImpl.java:205) at org.apache.airavata.gfac.core.utils.GFacUtils.createHandlerZnode(GFacUtils.java:346) at org.apache.airavata.gfac.core.utils.GFacUtils.updateHandlerState(GFacUtils.java:376) at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.invokeInFlowHandlers(BetterGfacImpl.java:871) ... 7 more
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