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Posted to jira@jena.apache.org by "Greg Albiston (Jira)" <ji...@apache.org> on 2022/03/25 00:41:00 UTC

[jira] [Assigned] (JENA-2310) NPE with geospatial property function due to query rewrite index issue

     [ https://issues.apache.org/jira/browse/JENA-2310?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]

Greg Albiston reassigned JENA-2310:
-----------------------------------

    Assignee: Greg Albiston

> NPE with geospatial property function due to query rewrite index issue
> ----------------------------------------------------------------------
>
>                 Key: JENA-2310
>                 URL: https://issues.apache.org/jira/browse/JENA-2310
>             Project: Apache Jena
>          Issue Type: Bug
>          Components: GeoSPARQL
>    Affects Versions: Jena 4.4.0
>            Reporter: Lorenz Bühmann
>            Assignee: Greg Albiston
>            Priority: Major
>
> Using a GeoSPARQL query with a geospatial property function, e.g.
> {code:java}
> SELECT * {
> :x geo:hasGeometry ?geo1 .
> ?s2 geo:hasGeometry ?geo2 .
> ?geo1 geo:sfContains ?geo2
> }{code}
> leads to an nondeterministic NPE when we're doing this query a a larger dataset.
> The reason is explained here:
>  - evaluation of the property function leads to {{GenericPropertyFunction}} class with
> {code:java}
>  private QueryIterator bothBound(Binding binding, Node subject, Node predicate, Node object, ExecutionContext execCxt) {
>         Graph graph = execCxt.getActiveGraph();
>         QueryRewriteIndex queryRewriteIndex = QueryRewriteIndex.retrieve(execCxt);
>         Boolean isPositiveResult = queryRewrite(graph, subject, predicate, object, queryRewriteIndex);
>         if (isPositiveResult) {
> {code}
>  
> which leads to the query rewrite part and in {{QueryRewriteIndex}} class we have
> {code:java}
>  if (index.containsKey(key)) {
>          result = index.get(key);
>  } else {
>          result = propertyFunction.testFilterFunction(subjectGeometryLiteral, objectGeometryLiteral);
>          index.put(key, result);
> }
> {code}
> {{index}} is an {{ExpiringMap}} which extends {{ConcurrentHashMap}} with an additional {{TimerTask}} clearing the map periodically - and this is why we get an NPE sometimes. Have a look at the lines above, in particular
> {code:java}
> if (index.containsKey(key)){
>    result = index.get(key); 
> }
> {code}
>  that part isn't atomic, thus, while {{containsKey}} could be true, the {{TimerTask}} might clear the map before we go to get - this will lead to a {{null}} value returned which will lead to an NPE in the check
> Since Java 8 the atomic way is to use {{computeIfAbsent}}, i.e. we can do
> {code:java}
> Boolean result = index.computeIfAbsent(key, k -> propertyFunction.testFilterFunction(subjectGeometryLiteral, objectGeometryLiteral));{code}
>  



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