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Posted to issues@airavata.apache.org by "Eroma (JIRA)" <ji...@apache.org> on 2016/03/30 21:46:25 UTC

[jira] [Closed] (AIRAVATA-1930) When experiments are cloned and launched the ARCHIVING does not function as the file path sent by PGA is incorrect

     [ https://issues.apache.org/jira/browse/AIRAVATA-1930?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]

Eroma closed AIRAVATA-1930.
---------------------------

tested and verified in https://dev.seagrid.org.
Now cloned experiment has inputs and outputs in the experiment summary. In storage all inputs and outputs exists and also the ARCHIVE folder has all files in the directory as well.



> When experiments are cloned and launched the ARCHIVING does not function as the file path sent by PGA is incorrect
> ------------------------------------------------------------------------------------------------------------------
>
>                 Key: AIRAVATA-1930
>                 URL: https://issues.apache.org/jira/browse/AIRAVATA-1930
>             Project: Airavata
>          Issue Type: Bug
>          Components: PGA PHP Web Gateway
>    Affects Versions: 0.16
>         Environment: https://seagrid.org
>            Reporter: Eroma
>            Assignee: Supun Chathuranga Nakandala
>             Fix For: 0.16
>
>
> 1. Cloned an experiment which had files archived in the storage. 
> 2. The new cloned experiment got successfully completed. 
> 3. No outputs are displayed in the experiment summary or on the storage. no ARCHIVE folder as well. 
> 4. Only shows exp and job status as COMPLETED. 
> 5. In stampede job was completed and all files exists. but in storage only the inputs are there
> 6. Airavata log has 
> ERROR org.apache.airavata.gfac.impl.task.SCPDataStageTask  - mkdir: cannot create directory ‘/Eroma2016’: Permission denied
> org.apache.airavata.gfac.core.SSHApiException: mkdir: cannot create directory ‘/Eroma2016’: Permission denied
>         at org.apache.airavata.gfac.impl.SSHUtils.makeDirectory(SSHUtils.java:454)
>         at org.apache.airavata.gfac.impl.task.SCPDataStageTask.execute(SCPDataStageTask.java:170)
>         at org.apache.airavata.gfac.impl.GFacEngineImpl.executeTask(GFacEngineImpl.java:737)
>         at org.apache.airavata.gfac.impl.GFacEngineImpl.outputDataStaging(GFacEngineImpl.java:689)
>         at org.apache.airavata.gfac.impl.GFacEngineImpl.executeTaskListFrom(GFacEngineImpl.java:299)
>         at org.apache.airavata.gfac.impl.GFacEngineImpl.continueProcess(GFacEngineImpl.java:648)
>         at org.apache.airavata.gfac.impl.GFacWorker.continueTaskExecution(GFacWorker.java:197)
>         at org.apache.airavata.gfac.impl.GFacWorker.run(GFacWorker.java:97)
>         at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
>         at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
>         at java.lang.Thread.run(Thread.java:745)



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