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Posted to commits@hudi.apache.org by "codope (via GitHub)" <gi...@apache.org> on 2024/07/07 17:29:02 UTC
[PR] [HUDI-7966] Handle NPE from AvroSchemaUtils.createNewSchemaFromFieldsWithReference [hudi]
codope opened a new pull request, #11585:
URL: https://github.com/apache/hudi/pull/11585
### Change Logs
Running [long-running](https://github.com/apache/hudi/blob/dbfe8b23c0b4f160b26379053873cfc2a46acef4/docker/demo/config/test-suite/spark-long-running-non-partitioned.yaml) deltastreamer with following properties: https://github.com/apache/hudi/blob/dbfe8b23c0b4f160b26379053873cfc2a46acef4/docker/demo/config/test-suite/test-nonpartitioned.properties
The job throws NPE during validation phase:
```
Caused by: org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 69.0 failed 4 times, most recent failure: Lost task 0.3 in stage 69.0 (TID 345) (10.0.103.207 executor 1): java.lang.NullPointerException at org.apache.avro.JsonProperties$2$1$1.<init>(JsonProperties.java:175) at org.apache.avro.JsonProperties$2$1.iterator(JsonProperties.java:174) at org.apache.avro.JsonProperties.getObjectProps(JsonProperties.java:305) at org.apache.hudi.avro.AvroSchemaUtils.createNewSchemaFromFieldsWithReference(AvroSchemaUtils.java:306) at org.apache.hudi.avro.AvroSchemaUtils.appendFieldsToSchemaBase(AvroSchemaUtils.java:293) at org.apache.hudi.avro.AvroSchemaUtils.appendFieldsToSchemaDedupNested(AvroSchemaUtils.java:245) at org.apache.hudi.common.table.read.HoodieFileGroupReaderSchemaHandler.generateRequiredSchema(HoodieFileGroupReaderSchemaHandler.java:146) at org.apache.hudi.common.table.read.HoodieFileGroupReaderSchemaHandler.prepareRequiredSchema(HoodieFil
eGroupReaderSchemaHandler.java:150) at org.apache.hudi.common.table.read.HoodieFileGroupReaderSchemaHandler.<init>(HoodieFileGroupReaderSchemaHandler.java:84) at org.apache.hudi.common.table.read.HoodieFileGroupReader.<init>(HoodieFileGroupReader.java:113) at org.apache.spark.sql.execution.datasources.parquet.HoodieFileGroupReaderBasedParquetFileFormat.$anonfun$buildReaderWithPartitionValues$3(HoodieFileGroupReaderBasedParquetFileFormat.scala:170) at org.apache.spark.sql.execution.datasources.FileScanRDD$$anon$1.org$apache$spark$sql$execution$datasources$FileScanRDD$$anon$$readCurrentFile(FileScanRDD.scala:209) at org.apache.spark.sql.execution.datasources.FileScanRDD$$anon$1.nextIterator(FileScanRDD.scala:270) at org.apache.spark.sql.execution.datasources.FileScanRDD$$anon$1.hasNext(FileScanRDD.scala:116) at scala.collection.Iterator$$anon$10.hasNext(Iterator.scala:460) at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage1.hashAgg_doA
ggregateWithoutKey_0$(Unknown Source) at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage1.processNext(Unknown Source) at org.apache.spark.sql.execution.BufferedRowIterator.hasNext(BufferedRowIterator.java:43) at org.apache.spark.sql.execution.WholeStageCodegenExec$$anon$1.hasNext(WholeStageCodegenExec.scala:760) at scala.collection.Iterator$$anon$10.hasNext(Iterator.scala:460) at org.apache.spark.shuffle.sort.BypassMergeSortShuffleWriter.write(BypassMergeSortShuffleWriter.java:140) at org.apache.spark.shuffle.ShuffleWriteProcessor.write(ShuffleWriteProcessor.scala:59) at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:99) at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:52) at org.apache.spark.scheduler.Task.run(Task.scala:136) at org.apache.spark.executor.Executor$TaskRunner.$anonfun$run$3(Executor.scala:548) at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1504) at o
rg.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:551) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) at java.lang.Thread.run(Thread.java:750)
```
The code assumes that all schema must have properties, which may not necessaily be true. This PR handles NPE by simply logging a warning if props are not present. Fields are still added (no behavior changes) and if props are present then those are added too.
### Impact
Bug fix, avoid blocking ingestion.
### Risk level (write none, low medium or high below)
low
### Documentation Update
_Describe any necessary documentation update if there is any new feature, config, or user-facing change. If not, put "none"._
- _The config description must be updated if new configs are added or the default value of the configs are changed_
- _Any new feature or user-facing change requires updating the Hudi website. Please create a Jira ticket, attach the
ticket number here and follow the [instruction](https://hudi.apache.org/contribute/developer-setup#website) to make
changes to the website._
### Contributor's checklist
- [ ] Read through [contributor's guide](https://hudi.apache.org/contribute/how-to-contribute)
- [ ] Change Logs and Impact were stated clearly
- [ ] Adequate tests were added if applicable
- [ ] CI passed
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Re: [PR] [HUDI-7966] Handle NPE from AvroSchemaUtils.createNewSchemaFromFieldsWithReference [hudi]
Posted by "hudi-bot (via GitHub)" <gi...@apache.org>.
hudi-bot commented on PR #11585:
URL: https://github.com/apache/hudi/pull/11585#issuecomment-2212544999
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## CI report:
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Re: [PR] [HUDI-7966] Handle NPE from AvroSchemaUtils.createNewSchemaFromFieldsWithReference [hudi]
Posted by "hudi-bot (via GitHub)" <gi...@apache.org>.
hudi-bot commented on PR #11585:
URL: https://github.com/apache/hudi/pull/11585#issuecomment-2212518854
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Re: [PR] [HUDI-7966] Handle NPE from AvroSchemaUtils.createNewSchemaFromFieldsWithReference [hudi]
Posted by "hudi-bot (via GitHub)" <gi...@apache.org>.
hudi-bot commented on PR #11585:
URL: https://github.com/apache/hudi/pull/11585#issuecomment-2212530734
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Re: [PR] [HUDI-7966] Handle NPE from AvroSchemaUtils.createNewSchemaFromFieldsWithReference [hudi]
Posted by "nsivabalan (via GitHub)" <gi...@apache.org>.
nsivabalan commented on code in PR #11585:
URL: https://github.com/apache/hudi/pull/11585#discussion_r1667798215
##########
hudi-common/src/main/java/org/apache/hudi/avro/AvroSchemaUtils.java:
##########
@@ -302,9 +306,17 @@ private static Schema appendFieldsToSchemaBase(Schema schema, List<Schema.Field>
* @return schema with fields from fields, and metadata from schema
*/
public static Schema createNewSchemaFromFieldsWithReference(Schema schema, List<Schema.Field> fields) {
+ if (schema == null) {
+ throw new IllegalArgumentException("Schema must not be null");
+ }
Schema newSchema = Schema.createRecord(schema.getName(), schema.getDoc(), schema.getNamespace(), schema.isError());
- for (Map.Entry<String, Object> prop : schema.getObjectProps().entrySet()) {
- newSchema.addProp(prop.getKey(), prop.getValue());
+ Map<String, Object> schemaProps = schema.getObjectProps();
+ if (schemaProps != null) {
+ for (Map.Entry<String, Object> prop : schemaProps.entrySet()) {
+ newSchema.addProp(prop.getKey(), prop.getValue());
+ }
+ } else {
+ LOG.warn("Schema.getObjectProps() returned null for schema: {}", schema);
Review Comment:
do we even need to log a warn ?
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Re: [PR] [HUDI-7966] Handle NPE from AvroSchemaUtils.createNewSchemaFromFieldsWithReference [hudi]
Posted by "danny0405 (via GitHub)" <gi...@apache.org>.
danny0405 commented on code in PR #11585:
URL: https://github.com/apache/hudi/pull/11585#discussion_r1668273223
##########
hudi-common/src/main/java/org/apache/hudi/avro/AvroSchemaUtils.java:
##########
@@ -302,9 +306,17 @@ private static Schema appendFieldsToSchemaBase(Schema schema, List<Schema.Field>
* @return schema with fields from fields, and metadata from schema
*/
public static Schema createNewSchemaFromFieldsWithReference(Schema schema, List<Schema.Field> fields) {
+ if (schema == null) {
+ throw new IllegalArgumentException("Schema must not be null");
+ }
Schema newSchema = Schema.createRecord(schema.getName(), schema.getDoc(), schema.getNamespace(), schema.isError());
- for (Map.Entry<String, Object> prop : schema.getObjectProps().entrySet()) {
- newSchema.addProp(prop.getKey(), prop.getValue());
+ Map<String, Object> schemaProps = schema.getObjectProps();
+ if (schemaProps != null) {
+ for (Map.Entry<String, Object> prop : schemaProps.entrySet()) {
+ newSchema.addProp(prop.getKey(), prop.getValue());
+ }
+ } else {
+ LOG.warn("Schema.getObjectProps() returned null for schema: {}", schema);
Review Comment:
Yeah, I found the doc mentioned the attributes: https://avro.apache.org/docs/1.11.1/specification/#schema-declaration, it should not affect the serialization/deserialization, but it doesn't say how it is affected.
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Re: [PR] [HUDI-7966] Handle NPE from AvroSchemaUtils.createNewSchemaFromFieldsWithReference [hudi]
Posted by "codope (via GitHub)" <gi...@apache.org>.
codope commented on code in PR #11585:
URL: https://github.com/apache/hudi/pull/11585#discussion_r1667874668
##########
hudi-common/src/main/java/org/apache/hudi/avro/AvroSchemaUtils.java:
##########
@@ -302,9 +306,17 @@ private static Schema appendFieldsToSchemaBase(Schema schema, List<Schema.Field>
* @return schema with fields from fields, and metadata from schema
*/
public static Schema createNewSchemaFromFieldsWithReference(Schema schema, List<Schema.Field> fields) {
+ if (schema == null) {
+ throw new IllegalArgumentException("Schema must not be null");
+ }
Schema newSchema = Schema.createRecord(schema.getName(), schema.getDoc(), schema.getNamespace(), schema.isError());
- for (Map.Entry<String, Object> prop : schema.getObjectProps().entrySet()) {
- newSchema.addProp(prop.getKey(), prop.getValue());
+ Map<String, Object> schemaProps = schema.getObjectProps();
+ if (schemaProps != null) {
+ for (Map.Entry<String, Object> prop : schemaProps.entrySet()) {
+ newSchema.addProp(prop.getKey(), prop.getValue());
+ }
+ } else {
+ LOG.warn("Schema.getObjectProps() returned null for schema: {}", schema);
Review Comment:
Schema has fields but no props. Throwing error would result in the same failure. The props were copied in https://github.com/apache/hudi/commit/eb20273cf662158f7872004c5460748b9695a240. We need to understand what's the side-effect of not having props. I think schema fields should be sufficient. @jonvex can help clarify this point.
> do we even need to log a warn ?
Logging a warn for debugging purpose.
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Re: [PR] [HUDI-7966] Handle NPE from AvroSchemaUtils.createNewSchemaFromFieldsWithReference [hudi]
Posted by "hudi-bot (via GitHub)" <gi...@apache.org>.
hudi-bot commented on PR #11585:
URL: https://github.com/apache/hudi/pull/11585#issuecomment-2213012460
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Re: [PR] [HUDI-7966] Handle NPE from AvroSchemaUtils.createNewSchemaFromFieldsWithReference [hudi]
Posted by "nsivabalan (via GitHub)" <gi...@apache.org>.
nsivabalan merged PR #11585:
URL: https://github.com/apache/hudi/pull/11585
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Re: [PR] [HUDI-7966] Handle NPE from AvroSchemaUtils.createNewSchemaFromFieldsWithReference [hudi]
Posted by "hudi-bot (via GitHub)" <gi...@apache.org>.
hudi-bot commented on PR #11585:
URL: https://github.com/apache/hudi/pull/11585#issuecomment-2212532489
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Re: [PR] [HUDI-7966] Handle NPE from AvroSchemaUtils.createNewSchemaFromFieldsWithReference [hudi]
Posted by "danny0405 (via GitHub)" <gi...@apache.org>.
danny0405 commented on code in PR #11585:
URL: https://github.com/apache/hudi/pull/11585#discussion_r1667814679
##########
hudi-common/src/main/java/org/apache/hudi/avro/AvroSchemaUtils.java:
##########
@@ -302,9 +306,17 @@ private static Schema appendFieldsToSchemaBase(Schema schema, List<Schema.Field>
* @return schema with fields from fields, and metadata from schema
*/
public static Schema createNewSchemaFromFieldsWithReference(Schema schema, List<Schema.Field> fields) {
+ if (schema == null) {
+ throw new IllegalArgumentException("Schema must not be null");
+ }
Schema newSchema = Schema.createRecord(schema.getName(), schema.getDoc(), schema.getNamespace(), schema.isError());
- for (Map.Entry<String, Object> prop : schema.getObjectProps().entrySet()) {
- newSchema.addProp(prop.getKey(), prop.getValue());
+ Map<String, Object> schemaProps = schema.getObjectProps();
+ if (schemaProps != null) {
+ for (Map.Entry<String, Object> prop : schemaProps.entrySet()) {
+ newSchema.addProp(prop.getKey(), prop.getValue());
+ }
+ } else {
+ LOG.warn("Schema.getObjectProps() returned null for schema: {}", schema);
Review Comment:
Should we throw here, what is the schema without any fields there?
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Re: [PR] [HUDI-7966] Handle NPE from AvroSchemaUtils.createNewSchemaFromFieldsWithReference [hudi]
Posted by "hudi-bot (via GitHub)" <gi...@apache.org>.
hudi-bot commented on PR #11585:
URL: https://github.com/apache/hudi/pull/11585#issuecomment-2213006012
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