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Build failed in Jenkins: beam_PostCommit_Py_VR_Dataflow #5485
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Changes:
[valentyn] Install SDK after tarball is generated to avoid a race in proto stubs
[kcweaver] [BEAM-9070] tests use absolute paths for job server jars
[github] [BEAM-5605] Add support for executing pair with restriction, split
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test_gbk_many_values (apache_beam.runners.portability.fn_api_runner_test.FnApiBasedStateBackedCoderTest) ... ok
Test TimestampCombiner with EARLIEST. ... ok
Test TimestampCombiner with LATEST. ... ok
Runs streaming Dataflow job and verifies that user metrics are reported ... ok
test_impulse (apache_beam.transforms.ptransform_test.PTransformTest) ... ok
test_flatten_multiple_pcollections_having_multiple_consumers (apache_beam.transforms.ptransform_test.PTransformTest) ... ok
test_flatten_one_single_pcollection (apache_beam.transforms.ptransform_test.PTransformTest) ... ok
test_flatten_a_flattened_pcollection (apache_beam.transforms.ptransform_test.PTransformTest) ... ok
test_flatten_pcollections (apache_beam.transforms.ptransform_test.PTransformTest) ... ok
test_dofn_lifecycle (apache_beam.transforms.dofn_lifecycle_test.DoFnLifecycleTest) ... ok
test_flatten_same_pcollections (apache_beam.transforms.ptransform_test.PTransformTest) ... ok
test_multiple_empty_outputs (apache_beam.transforms.ptransform_test.PTransformTest) ... ok
test_par_do_with_multiple_outputs_and_using_return (apache_beam.transforms.ptransform_test.PTransformTest) ... ok
test_as_dict_twice (apache_beam.transforms.sideinputs_test.SideInputsTest) ... ok
test_read_metrics (apache_beam.transforms.ptransform_test.PTransformTest) ... ok
test_as_list_twice (apache_beam.transforms.sideinputs_test.SideInputsTest) ... ok
test_as_list_and_as_dict_side_inputs (apache_beam.transforms.sideinputs_test.SideInputsTest) ... ok
test_undeclared_outputs (apache_beam.transforms.ptransform_test.PTransformTest) ... ok
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test_par_do_with_multiple_outputs_and_using_yield (apache_beam.transforms.ptransform_test.PTransformTest) ... ok
test_as_singleton_with_different_defaults (apache_beam.transforms.sideinputs_test.SideInputsTest) ... ok
test_flattened_side_input (apache_beam.transforms.sideinputs_test.SideInputsTest) ... ok
test_default_value_singleton_side_input (apache_beam.transforms.sideinputs_test.SideInputsTest) ... ok
test_empty_singleton_side_input (apache_beam.transforms.sideinputs_test.SideInputsTest) ... ok
test_iterable_side_input (apache_beam.transforms.sideinputs_test.SideInputsTest) ... ok
test_multi_valued_singleton_side_input (apache_beam.transforms.sideinputs_test.SideInputsTest) ... ok
test_as_singleton_without_unique_labels (apache_beam.transforms.sideinputs_test.SideInputsTest) ... ok
test_reshuffle_preserves_timestamps (apache_beam.transforms.util_test.ReshuffleTest) ... ok
test_element_param (apache_beam.pipeline_test.DoFnTest) ... ok
test_key_param (apache_beam.pipeline_test.DoFnTest) ... ok
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Ran 30 tests in 2404.524s
OK
> Task :sdks:python:test-suites:dataflow:py37:validatesRunnerStreamingTests
>>> RUNNING integration tests with pipeline options: --runner=TestDataflowRunner --project=apache-beam-testing --staging_location=gs://temp-storage-for-end-to-end-tests/staging-it --temp_location=gs://temp-storage-for-end-to-end-tests/temp-it --output=gs://temp-storage-for-end-to-end-tests/py-it-cloud/output --sdk_location=/home/jenkins/jenkins-slave/workspace/beam_PostCommit_Py_VR_Dataflow/src/sdks/python/build/apache-beam.tar.gz --requirements_file=postcommit_requirements.txt --num_workers=1 --sleep_secs=20 --streaming --dataflow_worker_jar=/home/jenkins/jenkins-slave/workspace/beam_PostCommit_Py_VR_Dataflow/src/runners/google-cloud-dataflow-java/worker/build/libs/beam-runners-google-cloud-dataflow-java-fn-api-worker-2.19.0-SNAPSHOT.jar --kms_key_name=projects/apache-beam-testing/locations/global/keyRings/beam-it/cryptoKeys/test --dataflow_kms_key=projects/apache-beam-testing/locations/global/keyRings/beam-it/cryptoKeys/test
>>> test options: --nocapture --processes=8 --process-timeout=4500 --attr=ValidatesRunner,!sickbay-streaming
running nosetests
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/home/jenkins/jenkins-slave/workspace/beam_PostCommit_Py_VR_Dataflow/src/sdks/python/apache_beam/io/vcfio.py:49: UserWarning: VCF IO will support Python 3 after migration to Nucleus, see: BEAM-5628.
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/home/jenkins/jenkins-slave/workspace/beam_PostCommit_Py_VR_Dataflow/src/sdks/python/apache_beam/transforms/trigger_test.py:513: YAMLLoadWarning: calling yaml.load_all() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details.
for spec in yaml.load_all(open(transcript_filename)):
> Task :sdks:python:test-suites:dataflow:py2:validatesRunnerStreamingTests
Runs streaming Dataflow job and verifies that user metrics are reported ... ok
test_dofn_lifecycle (apache_beam.transforms.dofn_lifecycle_test.DoFnLifecycleTest) ... ok
test_flatten_a_flattened_pcollection (apache_beam.transforms.ptransform_test.PTransformTest) ... ok
test_flatten_pcollections (apache_beam.transforms.ptransform_test.PTransformTest) ... ok
test_flatten_one_single_pcollection (apache_beam.transforms.ptransform_test.PTransformTest) ... ok
> Task :sdks:python:test-suites:dataflow:py36:validatesRunnerBatchTests
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test_gbk_many_values (apache_beam.runners.portability.fn_api_runner_test.FnApiBasedStateBackedCoderTest) ... ok
Test TimestampCombiner with EARLIEST. ... ok
Test TimestampCombiner with LATEST. ... ok
test_dofn_lifecycle (apache_beam.transforms.dofn_lifecycle_test.DoFnLifecycleTest) ... ok
Runs streaming Dataflow job and verifies that user metrics are reported ... ok
test_impulse (apache_beam.transforms.ptransform_test.PTransformTest) ... ok
test_flatten_same_pcollections (apache_beam.transforms.ptransform_test.PTransformTest) ... ok
test_flatten_one_single_pcollection (apache_beam.transforms.ptransform_test.PTransformTest) ... ok
test_flatten_pcollections (apache_beam.transforms.ptransform_test.PTransformTest) ... ok
test_flatten_a_flattened_pcollection (apache_beam.transforms.ptransform_test.PTransformTest) ... ok
test_flatten_multiple_pcollections_having_multiple_consumers (apache_beam.transforms.ptransform_test.PTransformTest) ... ok
test_read_metrics (apache_beam.transforms.ptransform_test.PTransformTest) ... ok
test_as_list_twice (apache_beam.transforms.sideinputs_test.SideInputsTest) ... ok
test_as_list_and_as_dict_side_inputs (apache_beam.transforms.sideinputs_test.SideInputsTest) ... ok
test_par_do_with_multiple_outputs_and_using_return (apache_beam.transforms.ptransform_test.PTransformTest) ... ok
test_as_dict_twice (apache_beam.transforms.sideinputs_test.SideInputsTest) ... ok
test_multiple_empty_outputs (apache_beam.transforms.ptransform_test.PTransformTest) ... ok
test_par_do_with_multiple_outputs_and_using_yield (apache_beam.transforms.ptransform_test.PTransformTest) ... ok
Test a GBK sideinput, with multiple triggering. ... ok
test_undeclared_outputs (apache_beam.transforms.ptransform_test.PTransformTest) ... ok
test_as_singleton_with_different_defaults (apache_beam.transforms.sideinputs_test.SideInputsTest) ... ok
test_as_singleton_without_unique_labels (apache_beam.transforms.sideinputs_test.SideInputsTest) ... ok
test_empty_singleton_side_input (apache_beam.transforms.sideinputs_test.SideInputsTest) ... ok
test_default_value_singleton_side_input (apache_beam.transforms.sideinputs_test.SideInputsTest) ... ok
test_flattened_side_input (apache_beam.transforms.sideinputs_test.SideInputsTest) ... ok
test_multi_valued_singleton_side_input (apache_beam.transforms.sideinputs_test.SideInputsTest) ... ok
test_iterable_side_input (apache_beam.transforms.sideinputs_test.SideInputsTest) ... ok
test_reshuffle_preserves_timestamps (apache_beam.transforms.util_test.ReshuffleTest) ... ok
test_element_param (apache_beam.pipeline_test.DoFnTest) ... ok
test_key_param (apache_beam.pipeline_test.DoFnTest) ... ok
----------------------------------------------------------------------
XML: nosetests-validatesRunnerBatchTests-df-py36.xml
----------------------------------------------------------------------
XML: /home/jenkins/jenkins-slave/workspace/beam_PostCommit_Py_VR_Dataflow/src/sdks/python/nosetests.xml
----------------------------------------------------------------------
Ran 30 tests in 2471.522s
OK
> Task :sdks:python:test-suites:dataflow:py36:validatesRunnerStreamingTests
>>> RUNNING integration tests with pipeline options: --runner=TestDataflowRunner --project=apache-beam-testing --staging_location=gs://temp-storage-for-end-to-end-tests/staging-it --temp_location=gs://temp-storage-for-end-to-end-tests/temp-it --output=gs://temp-storage-for-end-to-end-tests/py-it-cloud/output --sdk_location=/home/jenkins/jenkins-slave/workspace/beam_PostCommit_Py_VR_Dataflow/src/sdks/python/build/apache-beam.tar.gz --requirements_file=postcommit_requirements.txt --num_workers=1 --sleep_secs=20 --streaming --dataflow_worker_jar=/home/jenkins/jenkins-slave/workspace/beam_PostCommit_Py_VR_Dataflow/src/runners/google-cloud-dataflow-java/worker/build/libs/beam-runners-google-cloud-dataflow-java-fn-api-worker-2.19.0-SNAPSHOT.jar --kms_key_name=projects/apache-beam-testing/locations/global/keyRings/beam-it/cryptoKeys/test --dataflow_kms_key=projects/apache-beam-testing/locations/global/keyRings/beam-it/cryptoKeys/test
>>> test options: --nocapture --processes=8 --process-timeout=4500 --attr=ValidatesRunner,!sickbay-streaming
running nosetests
running egg_info
writing apache_beam.egg-info/PKG-INFO
writing dependency_links to apache_beam.egg-info/dependency_links.txt
writing entry points to apache_beam.egg-info/entry_points.txt
writing requirements to apache_beam.egg-info/requires.txt
writing top-level names to apache_beam.egg-info/top_level.txt
reading manifest file 'apache_beam.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
/home/jenkins/jenkins-slave/workspace/beam_PostCommit_Py_VR_Dataflow/src/build/gradleenv/-1734967053/lib/python3.6/site-packages/setuptools/dist.py:476: UserWarning: Normalizing '2.19.0.dev' to '2.19.0.dev0'
normalized_version,
warning: no files found matching 'README.md'
warning: no files found matching 'NOTICE'
warning: no files found matching 'LICENSE'
writing manifest file 'apache_beam.egg-info/SOURCES.txt'
/home/jenkins/jenkins-slave/workspace/beam_PostCommit_Py_VR_Dataflow/src/sdks/python/apache_beam/io/gcp/datastore/v1/datastoreio.py:64: UserWarning: Datastore IO will support Python 3 after replacing googledatastore by google-cloud-datastore, see: BEAM-4543.
warnings.warn('Datastore IO will support Python 3 after replacing '
/home/jenkins/jenkins-slave/workspace/beam_PostCommit_Py_VR_Dataflow/src/sdks/python/apache_beam/io/vcfio.py:49: UserWarning: VCF IO will support Python 3 after migration to Nucleus, see: BEAM-5628.
warnings.warn("VCF IO will support Python 3 after migration to Nucleus, "
/home/jenkins/jenkins-slave/workspace/beam_PostCommit_Py_VR_Dataflow/src/sdks/python/apache_beam/transforms/trigger_test.py:513: YAMLLoadWarning: calling yaml.load_all() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details.
for spec in yaml.load_all(open(transcript_filename)):
> Task :sdks:python:test-suites:dataflow:py2:validatesRunnerStreamingTests
test_as_list_and_as_dict_side_inputs (apache_beam.transforms.sideinputs_test.SideInputsTest) ... ok
test_as_dict_twice (apache_beam.transforms.sideinputs_test.SideInputsTest) ... ok
test_as_list_twice (apache_beam.transforms.sideinputs_test.SideInputsTest) ... ok
test_as_singleton_with_different_defaults (apache_beam.transforms.sideinputs_test.SideInputsTest) ... ok
FATAL: command execution failed
java.io.IOException: Backing channel 'JNLP4-connect connection from 88.61.224.35.bc.googleusercontent.com/35.224.61.88:46496' is disconnected.
at hudson.remoting.RemoteInvocationHandler.channelOrFail(RemoteInvocationHandler.java:214)
at hudson.remoting.RemoteInvocationHandler.invoke(RemoteInvocationHandler.java:283)
at com.sun.proxy.$Proxy141.isAlive(Unknown Source)
at hudson.Launcher$RemoteLauncher$ProcImpl.isAlive(Launcher.java:1150)
at hudson.Launcher$RemoteLauncher$ProcImpl.join(Launcher.java:1142)
at hudson.Launcher$ProcStarter.join(Launcher.java:470)
at hudson.plugins.gradle.Gradle.perform(Gradle.java:317)
at hudson.tasks.BuildStepMonitor$1.perform(BuildStepMonitor.java:20)
at hudson.model.AbstractBuild$AbstractBuildExecution.perform(AbstractBuild.java:741)
at hudson.model.Build$BuildExecution.build(Build.java:206)
at hudson.model.Build$BuildExecution.doRun(Build.java:163)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:504)
at hudson.model.Run.execute(Run.java:1815)
at hudson.model.FreeStyleBuild.run(FreeStyleBuild.java:43)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:429)
Caused by: java.nio.channels.ClosedChannelException
at org.jenkinsci.remoting.protocol.impl.ChannelApplicationLayer.onReadClosed(ChannelApplicationLayer.java:209)
at org.jenkinsci.remoting.protocol.ApplicationLayer.onRecvClosed(ApplicationLayer.java:222)
at org.jenkinsci.remoting.protocol.ProtocolStack$Ptr.onRecvClosed(ProtocolStack.java:816)
at org.jenkinsci.remoting.protocol.FilterLayer.onRecvClosed(FilterLayer.java:287)
at org.jenkinsci.remoting.protocol.impl.SSLEngineFilterLayer.onRecvClosed(SSLEngineFilterLayer.java:181)
at org.jenkinsci.remoting.protocol.impl.SSLEngineFilterLayer.switchToNoSecure(SSLEngineFilterLayer.java:283)
at org.jenkinsci.remoting.protocol.impl.SSLEngineFilterLayer.processWrite(SSLEngineFilterLayer.java:503)
at org.jenkinsci.remoting.protocol.impl.SSLEngineFilterLayer.processQueuedWrites(SSLEngineFilterLayer.java:248)
at org.jenkinsci.remoting.protocol.impl.SSLEngineFilterLayer.doSend(SSLEngineFilterLayer.java:200)
at org.jenkinsci.remoting.protocol.impl.SSLEngineFilterLayer.doCloseSend(SSLEngineFilterLayer.java:213)
at org.jenkinsci.remoting.protocol.ProtocolStack$Ptr.doCloseSend(ProtocolStack.java:784)
at org.jenkinsci.remoting.protocol.ApplicationLayer.doCloseWrite(ApplicationLayer.java:173)
at org.jenkinsci.remoting.protocol.impl.ChannelApplicationLayer$ByteBufferCommandTransport.closeWrite(ChannelApplicationLayer.java:314)
at hudson.remoting.Channel.close(Channel.java:1452)
at hudson.remoting.Channel.close(Channel.java:1405)
at hudson.slaves.SlaveComputer.closeChannel(SlaveComputer.java:847)
at hudson.slaves.SlaveComputer.kill(SlaveComputer.java:814)
at hudson.model.AbstractCIBase.killComputer(AbstractCIBase.java:89)
at jenkins.model.Jenkins.access$2100(Jenkins.java:312)
at jenkins.model.Jenkins$19.run(Jenkins.java:3464)
at hudson.model.Queue._withLock(Queue.java:1379)
at hudson.model.Queue.withLock(Queue.java:1256)
at jenkins.model.Jenkins._cleanUpDisconnectComputers(Jenkins.java:3458)
at jenkins.model.Jenkins.cleanUp(Jenkins.java:3336)
at hudson.WebAppMain.contextDestroyed(WebAppMain.java:379)
at org.apache.catalina.core.StandardContext.listenerStop(StandardContext.java:4732)
at org.apache.catalina.core.StandardContext.stopInternal(StandardContext.java:5396)
at org.apache.catalina.util.LifecycleBase.stop(LifecycleBase.java:257)
at org.apache.catalina.core.ContainerBase$StopChild.call(ContainerBase.java:1400)
at org.apache.catalina.core.ContainerBase$StopChild.call(ContainerBase.java:1389)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at org.apache.tomcat.util.threads.InlineExecutorService.execute(InlineExecutorService.java:75)
at java.util.concurrent.AbstractExecutorService.submit(AbstractExecutorService.java:134)
at org.apache.catalina.core.ContainerBase.stopInternal(ContainerBase.java:976)
at org.apache.catalina.util.LifecycleBase.stop(LifecycleBase.java:257)
at org.apache.catalina.core.ContainerBase$StopChild.call(ContainerBase.java:1400)
at org.apache.catalina.core.ContainerBase$StopChild.call(ContainerBase.java:1389)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at org.apache.tomcat.util.threads.InlineExecutorService.execute(InlineExecutorService.java:75)
at java.util.concurrent.AbstractExecutorService.submit(AbstractExecutorService.java:134)
at org.apache.catalina.core.ContainerBase.stopInternal(ContainerBase.java:976)
at org.apache.catalina.util.LifecycleBase.stop(LifecycleBase.java:257)
at org.apache.catalina.core.StandardService.stopInternal(StandardService.java:473)
at org.apache.catalina.util.LifecycleBase.stop(LifecycleBase.java:257)
at org.apache.catalina.core.StandardServer.stopInternal(StandardServer.java:994)
at org.apache.catalina.util.LifecycleBase.stop(LifecycleBase.java:257)
at org.apache.catalina.startup.Catalina.stop(Catalina.java:706)
at org.apache.catalina.startup.Catalina.start(Catalina.java:668)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:344)
at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:475)
Build step 'Invoke Gradle script' changed build result to FAILURE
Build step 'Invoke Gradle script' marked build as failure
ERROR: apache-beam-jenkins-10 is offline; cannot locate JDK 1.8 (latest)
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