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Posted to dev@arrow.apache.org by "Rauli Ruohonen (Jira)" <ji...@apache.org> on 2020/05/14 14:54:00 UTC
[jira] [Created] (ARROW-8801) Pyarrow leaks memory on read from
parquet file with UTC timestamps using pandas
Rauli Ruohonen created ARROW-8801:
-------------------------------------
Summary: Pyarrow leaks memory on read from parquet file with UTC timestamps using pandas
Key: ARROW-8801
URL: https://issues.apache.org/jira/browse/ARROW-8801
Project: Apache Arrow
Issue Type: Bug
Components: Python
Affects Versions: 0.17.0, 0.16.0
Environment: Tested using pyarrow 0.17.0, pandas 1.0.3, python 3.7.5, mojave (macos). Also tested using pyarrow 0.16.0, pandas 1.0.3, python 3.8.2, ubuntu 20.04 (linux).
Reporter: Rauli Ruohonen
Given dump.py script
{code:java}
import pandas as pd
import numpy as np
x = pd.to_datetime(np.random.randint(0, 2**32, size=2**20), unit='ms', utc=True)
pd.DataFrame({'x': x}).to_parquet('data.parquet', engine='pyarrow', compression=None)
{code}
and load.py script
{code:java}
import sys
import pandas as pd
def foo(engine):
for _ in range(2**9):
pd.read_parquet('data.parquet', engine=engine)
print('Done')
input()
foo(sys.argv[1])
{code}
running first "python dump.py" and then "python load.py pyarrow", on my machine python memory usage stays at 4+ GB while it waits for input. If using "python load.py fastparquet" instead, it is about 100 MB, so it should be a pyarrow issue instead of a pandas issue. The leak disappears if "utc=True" is removed from dump.py, in which case the timestamp is timezone-unaware.
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