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Posted to dev@airavata.apache.org by Lahiru Gunathilake <gl...@gmail.com> on 2013/08/22 16:46:34 UTC

Gram jobs failing in trunk

Hi Devs,

I tried to run a gram job on trunk and getting following error,

[INFO] Experiment launched
:Dihedral-Optimization-Workflow_d1e46d3b-85e8-4d7b-82eb-77dfad83ef6d
[ERROR] org/globus/gsi/provider/GlobusProvider
java.lang.NoClassDefFoundError: org/globus/gsi/provider/GlobusProvider
at
org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.addSecurityContext(EmbeddedGFacInvoker.java:438)
at
org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.invoke(EmbeddedGFacInvoker.java:319)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.handleWSComponent(WorkflowInterpreter.java:748)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.executeDynamically(WorkflowInterpreter.java:568)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.access$000(WorkflowInterpreter.java:117)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpreter$1.run(WorkflowInterpreter.java:235)
Caused by: java.lang.ClassNotFoundException:
org.globus.gsi.provider.GlobusProvider
at
org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1714)
at
org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1559)
... 6 more
[ERROR] org/globus/gsi/provider/GlobusProvider
java.lang.NoClassDefFoundError: org/globus/gsi/provider/GlobusProvider
at
org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.addSecurityContext(EmbeddedGFacInvoker.java:438)
at
org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.invoke(EmbeddedGFacInvoker.java:319)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.handleWSComponent(WorkflowInterpreter.java:748)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.executeDynamically(WorkflowInterpreter.java:568)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.access$000(WorkflowInterpreter.java:117)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpreter$1.run(WorkflowInterpreter.java:235)
Caused by: java.lang.ClassNotFoundException:
org.globus.gsi.provider.GlobusProvider
at
org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1714)
at
org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1559)
... 6 more
[ERROR] Error execution workflow Node : Prepare_Model_Reference_Data_invoke

I have used the tomcat pack created in integration tests.

Lahiru

-- 
System Analyst Programmer
PTI Lab
Indiana University

Re: Gram jobs failing in trunk

Posted by Amila Jayasekara <th...@gmail.com>.
This is fixed.

Cause - In the distribution pom we were using org.jgloubs:jglobus-all to
get all jglobus related jars. But due to some reason all jglobus jars are
not getting populated.
Fix - Manually added all jglobus jars.

Thanks
Amila


On Thu, Aug 22, 2013 at 10:46 AM, Lahiru Gunathilake <gl...@gmail.com>wrote:

> Hi Devs,
>
> I tried to run a gram job on trunk and getting following error,
>
> [INFO] Experiment launched
> :Dihedral-Optimization-Workflow_d1e46d3b-85e8-4d7b-82eb-77dfad83ef6d
> [ERROR] org/globus/gsi/provider/GlobusProvider
> java.lang.NoClassDefFoundError: org/globus/gsi/provider/GlobusProvider
> at
> org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.addSecurityContext(EmbeddedGFacInvoker.java:438)
>  at
> org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.invoke(EmbeddedGFacInvoker.java:319)
> at
> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.handleWSComponent(WorkflowInterpreter.java:748)
>  at
> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.executeDynamically(WorkflowInterpreter.java:568)
> at
> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.access$000(WorkflowInterpreter.java:117)
>  at
> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter$1.run(WorkflowInterpreter.java:235)
> Caused by: java.lang.ClassNotFoundException:
> org.globus.gsi.provider.GlobusProvider
>  at
> org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1714)
> at
> org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1559)
>  ... 6 more
> [ERROR] org/globus/gsi/provider/GlobusProvider
> java.lang.NoClassDefFoundError: org/globus/gsi/provider/GlobusProvider
> at
> org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.addSecurityContext(EmbeddedGFacInvoker.java:438)
>  at
> org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.invoke(EmbeddedGFacInvoker.java:319)
> at
> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.handleWSComponent(WorkflowInterpreter.java:748)
>  at
> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.executeDynamically(WorkflowInterpreter.java:568)
> at
> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.access$000(WorkflowInterpreter.java:117)
>  at
> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter$1.run(WorkflowInterpreter.java:235)
> Caused by: java.lang.ClassNotFoundException:
> org.globus.gsi.provider.GlobusProvider
>  at
> org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1714)
> at
> org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1559)
>  ... 6 more
> [ERROR] Error execution workflow Node : Prepare_Model_Reference_Data_invoke
>
> I have used the tomcat pack created in integration tests.
>
> Lahiru
>
> --
> System Analyst Programmer
> PTI Lab
> Indiana University
>