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Posted to dev@taverna.apache.org by "Stian Soiland-Reyes (JIRA)" <ji...@apache.org> on 2016/03/15 15:14:33 UTC

[jira] [Created] (TAVERNA-938) Run cwlrunner (nested CWL workflows)

Stian Soiland-Reyes created TAVERNA-938:
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             Summary: Run cwlrunner (nested CWL workflows)
                 Key: TAVERNA-938
                 URL: https://issues.apache.org/jira/browse/TAVERNA-938
             Project: Apache Taverna
          Issue Type: Bug
          Components: Taverna Common Activities
            Reporter: Stian Soiland-Reyes


Executing cwlrunner from Taverna (configured with a CWL workflow rather than a CWL tool) could be an interesting thing - that would be a way to include a CWL workflow as a nested workflow in Taverna. 

The CWL workflow can be added directly to the Workflow Bundle as-is and extracted to a temporary folder before running cwl-runner.

This would also be an intermediate approach towards TAVERNA-878  as you can execute any cwl tool by generating a one-step cwl workflow and run cwlrunner.


However then the user would need to have cwlrunner AND Taverna installed, so it would be more of an intermediate solution.



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