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Posted to commits@taverna.apache.org by Apache Jenkins Server <je...@builds.apache.org> on 2018/08/15 14:02:02 UTC
Build failed in Jenkins: incubator-taverna-language #489
See <https://builds.apache.org/job/incubator-taverna-language/489/display/redirect?page=changes>
Changes:
[m.haouech] Change components package and clean unused imports throught the project
[m.haouech] Parse step outputs from the yaml file
[m.haouech] Create a mirror process for each new nested workflow
[m.haouech] Add support for datalinks while converting a Workflow
[m.haouech] Use explicit imports instead of wildcards. Add minor test change.
[m.haouech] Add name attribute to all Processes
[m.haouech] Create a Taverna to Custom CWL Objects converter
------------------------------------------
[...truncated 2.22 KB...]
at java.lang.Thread.run(Thread.java:748)
Cloning the remote Git repository
Cloning repository https://git-wip-us.apache.org/repos/asf/incubator-taverna-language.git
> git init <https://builds.apache.org/job/incubator-taverna-language/ws/> # timeout=10
Fetching upstream changes from https://git-wip-us.apache.org/repos/asf/incubator-taverna-language.git
> git --version # timeout=10
> git fetch --tags --progress https://git-wip-us.apache.org/repos/asf/incubator-taverna-language.git +refs/heads/*:refs/remotes/origin/*
> git config remote.origin.url https://git-wip-us.apache.org/repos/asf/incubator-taverna-language.git # timeout=10
> git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
> git config remote.origin.url https://git-wip-us.apache.org/repos/asf/incubator-taverna-language.git # timeout=10
Fetching upstream changes from https://git-wip-us.apache.org/repos/asf/incubator-taverna-language.git
> git fetch --tags --progress https://git-wip-us.apache.org/repos/asf/incubator-taverna-language.git +refs/heads/*:refs/remotes/origin/*
> git rev-parse refs/remotes/origin/master^{commit} # timeout=10
> git rev-parse refs/remotes/origin/origin/master^{commit} # timeout=10
Checking out Revision af88d33fc0298232ec4965133465762e11888094 (refs/remotes/origin/master)
> git config core.sparsecheckout # timeout=10
> git checkout -f af88d33fc0298232ec4965133465762e11888094
Commit message: "Merge branch 'cwlparser'"
> git rev-list --no-walk fb5c41a89a55da3015ba5c9309860feb2a56a0b4 # timeout=10
Parsing POMs
Downloaded artifact http://repo.maven.apache.org/maven2/org/apache/taverna/apache-taverna-parent/3-incubating/apache-taverna-parent-3-incubating.pom
Failed to transfer Could not find artifact org.apache:apache:pom:18 in bintray-spring (https://dl.bintray.com/spring/jars)
Failed to transfer Could not find artifact org.apache:apache:pom:18 in repository.spring.release (https://repo.spring.io/release)
Failed to transfer Could not find artifact org.apache:apache:pom:18 in repository.spring.milestone (https://repo.spring.io/milestone)
Downloaded artifact https://jcenter.bintray.com/org/apache/apache/18/apache-18.pom
Modules changed, recalculating dependency graph
Established TCP socket on 38089
maven33-agent.jar already up to date
maven33-interceptor.jar already up to date
maven3-interceptor-commons.jar already up to date
[incubator-taverna-language] $ /home/jenkins/tools/java/latest1.9/bin/java -Xmx4g -Xms4g -cp /home/jenkins/jenkins-slave/maven33-agent.jar:/home/jenkins/tools/maven/apache-maven-3.3.3/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.3.3/conf/logging jenkins.maven3.agent.Maven33Main /home/jenkins/tools/maven/apache-maven-3.3.3 /home/jenkins/jenkins-slave/slave.jar /home/jenkins/jenkins-slave/maven33-interceptor.jar /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar 38089
<===[JENKINS REMOTING CAPACITY]===> channel started
Aug 15, 2018 2:01:35 PM hudson.remoting.UserRequest perform
WARNING: LinkageError while performing UserRequest:hudson.maven.Maven3Builder@5466007d
java.lang.NoClassDefFoundError: com/thoughtworks/xstream/converters/SingleValueConverter
at java.base/java.lang.Class.forName0(Native Method)
at java.base/java.lang.Class.forName(Class.java:292)
at com.sun.proxy.$Proxy6.<clinit>(Unknown Source)
at jdk.internal.reflect.GeneratedSerializationConstructorAccessor46.newInstance(Unknown Source)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at java.base/java.io.ObjectStreamClass.newInstance(ObjectStreamClass.java:1081)
at java.base/java.io.ObjectInputStream.readOrdinaryObject(ObjectInputStream.java:2066)
at java.base/java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1586)
at java.base/java.io.ObjectInputStream.defaultReadFields(ObjectInputStream.java:2350)
at java.base/java.io.ObjectInputStream.readSerialData(ObjectInputStream.java:2244)
at java.base/java.io.ObjectInputStream.readOrdinaryObject(ObjectInputStream.java:2082)
at java.base/java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1586)
at java.base/java.io.ObjectInputStream.readObject(ObjectInputStream.java:423)
at java.base/java.util.HashMap.readObject(HashMap.java:1461)
at java.base/jdk.internal.reflect.GeneratedMethodAccessor6.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at java.base/java.io.ObjectStreamClass.invokeReadObject(ObjectStreamClass.java:1160)
at java.base/java.io.ObjectInputStream.readSerialData(ObjectInputStream.java:2211)
at java.base/java.io.ObjectInputStream.readOrdinaryObject(ObjectInputStream.java:2082)
at java.base/java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1586)
at java.base/java.io.ObjectInputStream.defaultReadFields(ObjectInputStream.java:2350)
at java.base/java.io.ObjectInputStream.readSerialData(ObjectInputStream.java:2244)
at java.base/java.io.ObjectInputStream.readOrdinaryObject(ObjectInputStream.java:2082)
at java.base/java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1586)
at java.base/java.io.ObjectInputStream.readObject(ObjectInputStream.java:423)
at hudson.remoting.UserRequest.deserialize(UserRequest.java:291)
at hudson.remoting.UserRequest.perform(UserRequest.java:190)
at hudson.remoting.UserRequest.perform(UserRequest.java:54)
at hudson.remoting.Request$2.run(Request.java:369)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:72)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.ClassNotFoundException
at hudson.remoting.RemoteClassLoader$ClassLoaderProxy.fetch4(RemoteClassLoader.java:884)
at hudson.remoting.RemoteClassLoader$ClassLoaderProxy.fetch3(RemoteClassLoader.java:889)
at sun.reflect.GeneratedMethodAccessor11659.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at hudson.remoting.RemoteInvocationHandler$RPCRequest.perform(RemoteInvocationHandler.java:929)
at hudson.remoting.Request$2.run(Request.java:369)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:72)
at org.jenkinsci.remoting.CallableDecorator.call(CallableDecorator.java:19)
at hudson.remoting.CallableDecoratorList$1.call(CallableDecoratorList.java:21)
at jenkins.util.ContextResettingExecutorService$2.call(ContextResettingExecutorService.java:46)
at jenkins.security.ImpersonatingExecutorService$2.call(ImpersonatingExecutorService.java:71)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Suppressed: hudson.remoting.Channel$CallSiteStackTrace: Remote call to channel
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1741)
at hudson.remoting.Request.call(Request.java:202)
at hudson.remoting.RemoteInvocationHandler.invoke(RemoteInvocationHandler.java:286)
at com.sun.proxy.$Proxy2.fetch3(Unknown Source)
at hudson.remoting.RemoteClassLoader.findClass(RemoteClassLoader.java:209)
at java.base/java.lang.ClassLoader.loadClass(ClassLoader.java:563)
at java.base/java.lang.ClassLoader.loadClass(ClassLoader.java:496)
at java.base/java.lang.Class.forName0(Native Method)
at java.base/java.lang.Class.forName(Class.java:292)
at com.sun.proxy.$Proxy6.<clinit>(Unknown Source)
at jdk.internal.reflect.GeneratedSerializationConstructorAccessor46.newInstance(Unknown Source)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at java.base/java.io.ObjectStreamClass.newInstance(ObjectStreamClass.java:1081)
at java.base/java.io.ObjectInputStream.readOrdinaryObject(ObjectInputStream.java:2066)
at java.base/java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1586)
at java.base/java.io.ObjectInputStream.defaultReadFields(ObjectInputStream.java:2350)
at java.base/java.io.ObjectInputStream.readSerialData(ObjectInputStream.java:2244)
at java.base/java.io.ObjectInputStream.readOrdinaryObject(ObjectInputStream.java:2082)
at java.base/java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1586)
at java.base/java.io.ObjectInputStream.readObject(ObjectInputStream.java:423)
at java.base/java.util.HashMap.readObject(HashMap.java:1461)
at java.base/jdk.internal.reflect.GeneratedMethodAccessor6.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:564)
at java.base/java.io.ObjectStreamClass.invokeReadObject(ObjectStreamClass.java:1160)
at java.base/java.io.ObjectInputStream.readSerialData(ObjectInputStream.java:2211)
at java.base/java.io.ObjectInputStream.readOrdinaryObject(ObjectInputStream.java:2082)
at java.base/java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1586)
at java.base/java.io.ObjectInputStream.defaultReadFields(ObjectInputStream.java:2350)
at java.base/java.io.ObjectInputStream.readSerialData(ObjectInputStream.java:2244)
at java.base/java.io.ObjectInputStream.readOrdinaryObject(ObjectInputStream.java:2082)
at java.base/java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1586)
at java.base/java.io.ObjectInputStream.readObject(ObjectInputStream.java:423)
at hudson.remoting.UserRequest.deserialize(UserRequest.java:291)
at hudson.remoting.UserRequest.perform(UserRequest.java:190)
at hudson.remoting.UserRequest.perform(UserRequest.java:54)
at hudson.remoting.Request$2.run(Request.java:369)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:72)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.base/java.lang.Thread.run(Thread.java:844)
ERROR: Failed to parse POMs
java.io.IOException: Remote call on Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms4g, -cp, /home/jenkins/jenkins-slave/maven33-agent.jar:/home/jenkins/tools/maven/apache-maven-3.3.3/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.3.3/conf/logging, jenkins.maven3.agent.Maven33Main, /home/jenkins/tools/maven/apache-maven-3.3.3, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven33-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 38089] failed
at hudson.remoting.Channel.call(Channel.java:961)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:504)
at hudson.model.Run.execute(Run.java:1794)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:429)
Caused by: java.lang.NoClassDefFoundError: com/thoughtworks/xstream/converters/SingleValueConverter
at java.lang.Class.forName0(Native Method)
at java.lang.Class.forName(Class.java:292)
at com.sun.proxy.$Proxy6.<clinit>(Unknown Source)
at jdk.internal.reflect.GeneratedSerializationConstructorAccessor46.newInstance(Unknown Source)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at java.io.ObjectStreamClass.newInstance(ObjectStreamClass.java:1081)
at java.io.ObjectInputStream.readOrdinaryObject(ObjectInputStream.java:2066)
at java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1586)
at java.io.ObjectInputStream.defaultReadFields(ObjectInputStream.java:2350)
at java.io.ObjectInputStream.readSerialData(ObjectInputStream.java:2244)
at java.io.ObjectInputStream.readOrdinaryObject(ObjectInputStream.java:2082)
at java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1586)
at java.io.ObjectInputStream.readObject(ObjectInputStream.java:423)
at java.util.HashMap.readObject(HashMap.java:1461)
at jdk.internal.reflect.GeneratedMethodAccessor6.invoke(Unknown Source)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at java.io.ObjectStreamClass.invokeReadObject(ObjectStreamClass.java:1160)
at java.io.ObjectInputStream.readSerialData(ObjectInputStream.java:2211)
at java.io.ObjectInputStream.readOrdinaryObject(ObjectInputStream.java:2082)
at java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1586)
at java.io.ObjectInputStream.defaultReadFields(ObjectInputStream.java:2350)
at java.io.ObjectInputStream.readSerialData(ObjectInputStream.java:2244)
at java.io.ObjectInputStream.readOrdinaryObject(ObjectInputStream.java:2082)
at java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1586)
at java.io.ObjectInputStream.readObject(ObjectInputStream.java:423)
at hudson.remoting.UserRequest.deserialize(UserRequest.java:291)
at hudson.remoting.UserRequest.perform(UserRequest.java:190)
at hudson.remoting.UserRequest.perform(UserRequest.java:54)
at hudson.remoting.Request$2.run(Request.java:369)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:72)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
Suppressed: hudson.remoting.Channel$CallSiteStackTrace: Remote call to Channel to Maven [/home/jenkins/tools/java/latest1.9/bin/java, -Xmx4g, -Xms4g, -cp, /home/jenkins/jenkins-slave/maven33-agent.jar:/home/jenkins/tools/maven/apache-maven-3.3.3/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.3.3/conf/logging, jenkins.maven3.agent.Maven33Main, /home/jenkins/tools/maven/apache-maven-3.3.3, /home/jenkins/jenkins-slave/slave.jar, /home/jenkins/jenkins-slave/maven33-interceptor.jar, /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar, 38089]
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1741)
at hudson.remoting.UserRequest$ExceptionResponse.retrieve(UserRequest.java:357)
at hudson.remoting.Channel.call(Channel.java:955)
at hudson.maven.ProcessCache$MavenProcess.call(ProcessCache.java:161)
at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:879)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:504)
at hudson.model.Run.execute(Run.java:1794)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:429)
Caused by: java.lang.ClassNotFoundException
at hudson.remoting.RemoteClassLoader$ClassLoaderProxy.fetch4(RemoteClassLoader.java:884)
at hudson.remoting.RemoteClassLoader$ClassLoaderProxy.fetch3(RemoteClassLoader.java:889)
at sun.reflect.GeneratedMethodAccessor11659.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at hudson.remoting.RemoteInvocationHandler$RPCRequest.perform(RemoteInvocationHandler.java:929)
at hudson.remoting.Request$2.run(Request.java:369)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:72)
at org.jenkinsci.remoting.CallableDecorator.call(CallableDecorator.java:19)
at hudson.remoting.CallableDecoratorList$1.call(CallableDecoratorList.java:21)
at jenkins.util.ContextResettingExecutorService$2.call(ContextResettingExecutorService.java:46)
at jenkins.security.ImpersonatingExecutorService$2.call(ImpersonatingExecutorService.java:71)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Suppressed: hudson.remoting.Channel$CallSiteStackTrace: Remote call to channel
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1741)
at hudson.remoting.Request.call(Request.java:202)
at hudson.remoting.RemoteInvocationHandler.invoke(RemoteInvocationHandler.java:286)
at com.sun.proxy.$Proxy2.fetch3(Unknown Source)
at hudson.remoting.RemoteClassLoader.findClass(RemoteClassLoader.java:209)
at java.lang.ClassLoader.loadClass(ClassLoader.java:563)
at java.lang.ClassLoader.loadClass(ClassLoader.java:496)
at java.lang.Class.forName0(Native Method)
at java.lang.Class.forName(Class.java:292)
at com.sun.proxy.$Proxy6.<clinit>(Unknown Source)
at jdk.internal.reflect.GeneratedSerializationConstructorAccessor46.newInstance(Unknown Source)
at java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at java.io.ObjectStreamClass.newInstance(ObjectStreamClass.java:1081)
at java.io.ObjectInputStream.readOrdinaryObject(ObjectInputStream.java:2066)
at java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1586)
at java.io.ObjectInputStream.defaultReadFields(ObjectInputStream.java:2350)
at java.io.ObjectInputStream.readSerialData(ObjectInputStream.java:2244)
at java.io.ObjectInputStream.readOrdinaryObject(ObjectInputStream.java:2082)
at java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1586)
at java.io.ObjectInputStream.readObject(ObjectInputStream.java:423)
at java.util.HashMap.readObject(HashMap.java:1461)
at jdk.internal.reflect.GeneratedMethodAccessor6.invoke(Unknown Source)
at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:564)
at java.io.ObjectStreamClass.invokeReadObject(ObjectStreamClass.java:1160)
at java.io.ObjectInputStream.readSerialData(ObjectInputStream.java:2211)
at java.io.ObjectInputStream.readOrdinaryObject(ObjectInputStream.java:2082)
at java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1586)
at java.io.ObjectInputStream.defaultReadFields(ObjectInputStream.java:2350)
at java.io.ObjectInputStream.readSerialData(ObjectInputStream.java:2244)
at java.io.ObjectInputStream.readOrdinaryObject(ObjectInputStream.java:2082)
at java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1586)
at java.io.ObjectInputStream.readObject(ObjectInputStream.java:423)
at hudson.remoting.UserRequest.deserialize(UserRequest.java:291)
at hudson.remoting.UserRequest.perform(UserRequest.java:190)
at hudson.remoting.UserRequest.perform(UserRequest.java:54)
at hudson.remoting.Request$2.run(Request.java:369)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:72)
at java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
at java.lang.Thread.run(Thread.java:844)
channel stopped
Jenkins build is back to normal : incubator-taverna-language #490
Posted by Apache Jenkins Server <je...@builds.apache.org>.
See <https://builds.apache.org/job/incubator-taverna-language/490/display/redirect?page=changes>