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Posted to commits@hbase.apache.org by ap...@apache.org on 2018/08/16 22:20:07 UTC

[1/8] hbase git commit: HBASE-20940 HStore.cansplit should not allow split to happen if it has references (Vishal Khandelwal)

Repository: hbase
Updated Branches:
  refs/heads/branch-1 5520fa1ab -> 971d48406
  refs/heads/branch-1.3 fe55991b8 -> efafa4108
  refs/heads/branch-1.4 472a13aaf -> 9e5a1cb2b
  refs/heads/branch-2 75939775a -> 1fa67725c
  refs/heads/branch-2.0 66489b504 -> 7564efaf9
  refs/heads/branch-2.1 145c92f3d -> b49941012
  refs/heads/master 2cfe1e8ae -> 1dbd6fa99


HBASE-20940 HStore.cansplit should not allow split to happen if it has references (Vishal Khandelwal)


Project: http://git-wip-us.apache.org/repos/asf/hbase/repo
Commit: http://git-wip-us.apache.org/repos/asf/hbase/commit/252f1bc5
Tree: http://git-wip-us.apache.org/repos/asf/hbase/tree/252f1bc5
Diff: http://git-wip-us.apache.org/repos/asf/hbase/diff/252f1bc5

Branch: refs/heads/branch-2.0
Commit: 252f1bc5de68ced75b062d7155a3e7b464e868a0
Parents: 66489b5
Author: Andrew Purtell <ap...@apache.org>
Authored: Tue Aug 7 14:54:29 2018 -0700
Committer: Andrew Purtell <ap...@apache.org>
Committed: Wed Aug 15 17:52:41 2018 -0700

----------------------------------------------------------------------
 .../hadoop/hbase/regionserver/HStore.java       |  12 +-
 .../client/TestAsyncTableGetMultiThreaded.java  |  28 +++-
 .../hbase/io/encoding/TestChangingEncoding.java |   4 +
 .../TestEndToEndSplitTransaction.java           | 136 +++++++++++++++++--
 .../TestSplitTransactionOnCluster.java          |  37 +++--
 5 files changed, 190 insertions(+), 27 deletions(-)
----------------------------------------------------------------------


http://git-wip-us.apache.org/repos/asf/hbase/blob/252f1bc5/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/HStore.java
----------------------------------------------------------------------
diff --git a/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/HStore.java b/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/HStore.java
index 035496f..3943de1 100644
--- a/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/HStore.java
+++ b/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/HStore.java
@@ -1632,7 +1632,17 @@ public class HStore implements Store, HeapSize, StoreConfigInformation, Propagat
 
   @Override
   public boolean hasReferences() {
-    return StoreUtils.hasReferences(this.storeEngine.getStoreFileManager().getStorefiles());
+    List<HStoreFile> reloadedStoreFiles = null;
+    try {
+      // Reloading the store files from file system due to HBASE-20940. As split can happen with an
+      // region which has references
+      reloadedStoreFiles = loadStoreFiles();
+      return StoreUtils.hasReferences(reloadedStoreFiles);
+    } catch (IOException ioe) {
+      LOG.error("Error trying to determine if store has references, assuming references exists",
+        ioe);
+      return true;
+    }
   }
 
   /**

http://git-wip-us.apache.org/repos/asf/hbase/blob/252f1bc5/hbase-server/src/test/java/org/apache/hadoop/hbase/client/TestAsyncTableGetMultiThreaded.java
----------------------------------------------------------------------
diff --git a/hbase-server/src/test/java/org/apache/hadoop/hbase/client/TestAsyncTableGetMultiThreaded.java b/hbase-server/src/test/java/org/apache/hadoop/hbase/client/TestAsyncTableGetMultiThreaded.java
index 7632716..8a2dfcc 100644
--- a/hbase-server/src/test/java/org/apache/hadoop/hbase/client/TestAsyncTableGetMultiThreaded.java
+++ b/hbase-server/src/test/java/org/apache/hadoop/hbase/client/TestAsyncTableGetMultiThreaded.java
@@ -21,7 +21,6 @@ import static org.apache.hadoop.hbase.HConstants.HBASE_CLIENT_META_OPERATION_TIM
 import static org.apache.hadoop.hbase.master.LoadBalancer.TABLES_ON_MASTER;
 import static org.junit.Assert.assertEquals;
 
-import java.io.IOException;
 import java.util.ArrayList;
 import java.util.Arrays;
 import java.util.Collections;
@@ -35,18 +34,21 @@ import java.util.concurrent.TimeUnit;
 import java.util.concurrent.atomic.AtomicBoolean;
 import java.util.stream.Collectors;
 import java.util.stream.IntStream;
+
 import org.apache.commons.io.IOUtils;
 import org.apache.hadoop.hbase.HBaseClassTestRule;
 import org.apache.hadoop.hbase.HBaseTestingUtility;
 import org.apache.hadoop.hbase.MemoryCompactionPolicy;
 import org.apache.hadoop.hbase.ServerName;
 import org.apache.hadoop.hbase.TableName;
+import org.apache.hadoop.hbase.Waiter.ExplainingPredicate;
 import org.apache.hadoop.hbase.io.ByteBufferPool;
 import org.apache.hadoop.hbase.regionserver.CompactingMemStore;
 import org.apache.hadoop.hbase.regionserver.HRegion;
 import org.apache.hadoop.hbase.testclassification.ClientTests;
 import org.apache.hadoop.hbase.testclassification.LargeTests;
 import org.apache.hadoop.hbase.util.Bytes;
+import org.apache.hadoop.hbase.util.RetryCounter;
 import org.apache.hadoop.hbase.util.Threads;
 import org.junit.AfterClass;
 import org.junit.BeforeClass;
@@ -124,7 +126,7 @@ public class TestAsyncTableGetMultiThreaded {
   }
 
   @Test
-  public void test() throws IOException, InterruptedException, ExecutionException {
+  public void test() throws Exception {
     int numThreads = 20;
     AtomicBoolean stop = new AtomicBoolean(false);
     ExecutorService executor =
@@ -137,9 +139,31 @@ public class TestAsyncTableGetMultiThreaded {
     Collections.shuffle(Arrays.asList(SPLIT_KEYS), new Random(123));
     Admin admin = TEST_UTIL.getAdmin();
     for (byte[] splitPoint : SPLIT_KEYS) {
+      int oldRegionCount = admin.getRegions(TABLE_NAME).size();
       admin.split(TABLE_NAME, splitPoint);
+      TEST_UTIL.waitFor(30000, new ExplainingPredicate<Exception>() {
+        @Override
+        public boolean evaluate() throws Exception {
+          return TEST_UTIL.getMiniHBaseCluster().getRegions(TABLE_NAME).size() > oldRegionCount;
+        }
+
+        @Override
+        public String explainFailure() throws Exception {
+          return "Split has not finished yet";
+        }
+      });
+
       for (HRegion region : TEST_UTIL.getHBaseCluster().getRegions(TABLE_NAME)) {
         region.compact(true);
+
+        //Waiting for compaction to complete and references are cleaned up
+        RetryCounter retrier = new RetryCounter(30, 1, TimeUnit.SECONDS);
+        while (CompactionState.NONE != admin
+            .getCompactionStateForRegion(region.getRegionInfo().getRegionName())
+            && retrier.shouldRetry()) {
+          retrier.sleepUntilNextRetry();
+        }
+        region.getStores().get(0).closeAndArchiveCompactedFiles();
       }
       Thread.sleep(5000);
       admin.balance(true);

http://git-wip-us.apache.org/repos/asf/hbase/blob/252f1bc5/hbase-server/src/test/java/org/apache/hadoop/hbase/io/encoding/TestChangingEncoding.java
----------------------------------------------------------------------
diff --git a/hbase-server/src/test/java/org/apache/hadoop/hbase/io/encoding/TestChangingEncoding.java b/hbase-server/src/test/java/org/apache/hadoop/hbase/io/encoding/TestChangingEncoding.java
index 1937d80..38313c4 100644
--- a/hbase-server/src/test/java/org/apache/hadoop/hbase/io/encoding/TestChangingEncoding.java
+++ b/hbase-server/src/test/java/org/apache/hadoop/hbase/io/encoding/TestChangingEncoding.java
@@ -107,6 +107,10 @@ public class TestChangingEncoding {
   public static void setUpBeforeClass() throws Exception {
     // Use a small flush size to create more HFiles.
     conf.setInt(HConstants.HREGION_MEMSTORE_FLUSH_SIZE, 1024 * 1024);
+    // Disabling split to make sure split does not cause modify column to wait which timesout test
+    // sometime
+    conf.set(HConstants.HBASE_REGION_SPLIT_POLICY_KEY,
+        "org.apache.hadoop.hbase.regionserver.DisabledRegionSplitPolicy");
     // ((Log4JLogger)RpcServerImplementation.LOG).getLogger().setLevel(Level.TRACE);
     // ((Log4JLogger)RpcClient.LOG).getLogger().setLevel(Level.TRACE);
     TEST_UTIL.startMiniCluster();

http://git-wip-us.apache.org/repos/asf/hbase/blob/252f1bc5/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestEndToEndSplitTransaction.java
----------------------------------------------------------------------
diff --git a/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestEndToEndSplitTransaction.java b/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestEndToEndSplitTransaction.java
index b0302f6..85e9d30 100644
--- a/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestEndToEndSplitTransaction.java
+++ b/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestEndToEndSplitTransaction.java
@@ -24,10 +24,13 @@ import static org.junit.Assert.assertTrue;
 import java.io.IOException;
 import java.util.ArrayList;
 import java.util.List;
+import java.util.Map;
 import java.util.Random;
 import java.util.Set;
 import java.util.TreeSet;
+import java.util.concurrent.TimeUnit;
 import java.util.stream.Collectors;
+
 import org.apache.commons.io.IOUtils;
 import org.apache.hadoop.conf.Configuration;
 import org.apache.hadoop.hbase.ChoreService;
@@ -41,6 +44,8 @@ import org.apache.hadoop.hbase.ScheduledChore;
 import org.apache.hadoop.hbase.Stoppable;
 import org.apache.hadoop.hbase.TableName;
 import org.apache.hadoop.hbase.client.Admin;
+import org.apache.hadoop.hbase.client.ColumnFamilyDescriptorBuilder;
+import org.apache.hadoop.hbase.client.CompactionState;
 import org.apache.hadoop.hbase.client.Connection;
 import org.apache.hadoop.hbase.client.ConnectionFactory;
 import org.apache.hadoop.hbase.client.Get;
@@ -49,13 +54,19 @@ import org.apache.hadoop.hbase.client.RegionInfo;
 import org.apache.hadoop.hbase.client.RegionLocator;
 import org.apache.hadoop.hbase.client.Result;
 import org.apache.hadoop.hbase.client.Table;
+import org.apache.hadoop.hbase.client.TableDescriptor;
+import org.apache.hadoop.hbase.client.TableDescriptorBuilder;
 import org.apache.hadoop.hbase.testclassification.LargeTests;
 import org.apache.hadoop.hbase.util.Bytes;
 import org.apache.hadoop.hbase.util.Pair;
 import org.apache.hadoop.hbase.util.PairOfSameType;
+import org.apache.hadoop.hbase.util.RetryCounter;
 import org.apache.hadoop.hbase.util.StoppableImplementation;
 import org.apache.hadoop.hbase.util.Threads;
+import org.apache.hbase.thirdparty.com.google.common.collect.Iterators;
+import org.apache.hbase.thirdparty.com.google.common.collect.Maps;
 import org.junit.AfterClass;
+import org.junit.Assert;
 import org.junit.BeforeClass;
 import org.junit.ClassRule;
 import org.junit.Rule;
@@ -65,8 +76,6 @@ import org.junit.rules.TestName;
 import org.slf4j.Logger;
 import org.slf4j.LoggerFactory;
 
-import org.apache.hbase.thirdparty.com.google.common.collect.Iterators;
-
 @Category(LargeTests.class)
 public class TestEndToEndSplitTransaction {
 
@@ -92,6 +101,78 @@ public class TestEndToEndSplitTransaction {
     TEST_UTIL.shutdownMiniCluster();
   }
 
+
+  /*
+   * This is the test for : HBASE-20940 This test will split the region and try to open an reference
+   * over store file. Once store file has any reference, it makes sure that region can't be split
+   * @throws Exception
+   */
+  @Test
+  public void testCanSplitJustAfterASplit() throws Exception {
+    LOG.info("Starting testCanSplitJustAfterASplit");
+    byte[] fam = Bytes.toBytes("cf_split");
+
+    TableName tableName = TableName.valueOf("CanSplitTable");
+    Table source = TEST_UTIL.getConnection().getTable(tableName);
+    Admin admin = TEST_UTIL.getAdmin();
+    Map<String, StoreFileReader> scanner = Maps.newHashMap();
+
+    try {
+      TableDescriptor htd = TableDescriptorBuilder.newBuilder(tableName)
+          .setColumnFamily(ColumnFamilyDescriptorBuilder.of(fam)).build();
+
+      admin.createTable(htd);
+      TEST_UTIL.loadTable(source, fam);
+      List<HRegion> regions = TEST_UTIL.getHBaseCluster().getRegions(tableName);
+      regions.get(0).forceSplit(null);
+      admin.split(tableName);
+
+      while (regions.size() <= 1) {
+        regions = TEST_UTIL.getHBaseCluster().getRegions(tableName);
+        regions.stream()
+            .forEach(r -> r.getStores().get(0).getStorefiles().stream()
+                .filter(
+                  s -> s.isReference() && !scanner.containsKey(r.getRegionInfo().getEncodedName()))
+                .forEach(sf -> {
+                  StoreFileReader reader = ((HStoreFile) sf).getReader();
+                  reader.getStoreFileScanner(true, false, false, 0, 0, false);
+                  scanner.put(r.getRegionInfo().getEncodedName(), reader);
+                  LOG.info("Got reference to file = " + sf.getPath() + ",for region = "
+                      + r.getRegionInfo().getEncodedName());
+                }));
+      }
+
+      Assert.assertTrue("Regions did not split properly", regions.size() > 1);
+      Assert.assertTrue("Could not get reference any of the store file", scanner.size() > 1);
+
+      RetryCounter retrier = new RetryCounter(30, 1, TimeUnit.SECONDS);
+      while (CompactionState.NONE != admin.getCompactionState(tableName) && retrier.shouldRetry()) {
+        retrier.sleepUntilNextRetry();
+      }
+
+      Assert.assertEquals("Compaction did not complete in 30 secs", CompactionState.NONE,
+        admin.getCompactionState(tableName));
+
+      regions.stream()
+          .filter(region -> scanner.containsKey(region.getRegionInfo().getEncodedName()))
+          .forEach(r -> Assert.assertTrue("Contains an open file reference which can be split",
+            !r.getStores().get(0).canSplit()));
+    } finally {
+      scanner.values().stream().forEach(s -> {
+        try {
+          s.close(true);
+        } catch (IOException ioe) {
+          LOG.error("Failed while closing store file", ioe);
+        }
+      });
+      scanner.clear();
+      if (source != null) {
+        source.close();
+      }
+      TEST_UTIL.deleteTableIfAny(tableName);
+    }
+  }
+
   /**
    * Tests that the client sees meta table changes as atomic during splits
    */
@@ -151,18 +232,17 @@ public class TestEndToEndSplitTransaction {
     public void run() {
       try {
         Random random = new Random();
-        for (int i= 0; i< 5; i++) {
-          List<RegionInfo> regions =
-              MetaTableAccessor.getTableRegions(connection, tableName, true);
+        for (int i = 0; i < 5; i++) {
+          List<RegionInfo> regions = MetaTableAccessor.getTableRegions(connection, tableName, true);
           if (regions.isEmpty()) {
             continue;
           }
           int regionIndex = random.nextInt(regions.size());
 
-          //pick a random region and split it into two
+          // pick a random region and split it into two
           RegionInfo region = Iterators.get(regions.iterator(), regionIndex);
 
-          //pick the mid split point
+          // pick the mid split point
           int start = 0, end = Integer.MAX_VALUE;
           if (region.getStartKey().length > 0) {
             start = Bytes.toInt(region.getStartKey());
@@ -173,7 +253,7 @@ public class TestEndToEndSplitTransaction {
           int mid = start + ((end - start) / 2);
           byte[] splitPoint = Bytes.toBytes(mid);
 
-          //put some rows to the regions
+          // put some rows to the regions
           addData(start);
           addData(mid);
 
@@ -183,11 +263,11 @@ public class TestEndToEndSplitTransaction {
           log("Initiating region split for:" + region.getRegionNameAsString());
           try {
             admin.splitRegion(region.getRegionName(), splitPoint);
-            //wait until the split is complete
+            // wait until the split is complete
             blockUntilRegionSplit(CONF, 50000, region.getRegionName(), true);
 
           } catch (NotServingRegionException ex) {
-            //ignore
+            // ignore
           }
         }
       } catch (Throwable ex) {
@@ -226,9 +306,11 @@ public class TestEndToEndSplitTransaction {
     /** verify region boundaries obtained from MetaScanner */
     void verifyRegionsUsingMetaTableAccessor() throws Exception {
       List<RegionInfo> regionList = MetaTableAccessor.getTableRegions(connection, tableName, true);
-      verifyTableRegions(regionList.stream().collect(Collectors.toCollection(() -> new TreeSet<>(RegionInfo.COMPARATOR))));
+      verifyTableRegions(regionList.stream()
+          .collect(Collectors.toCollection(() -> new TreeSet<>(RegionInfo.COMPARATOR))));
       regionList = MetaTableAccessor.getAllRegions(connection, true);
-      verifyTableRegions(regionList.stream().collect(Collectors.toCollection(() -> new TreeSet<>(RegionInfo.COMPARATOR))));
+      verifyTableRegions(regionList.stream()
+          .collect(Collectors.toCollection(() -> new TreeSet<>(RegionInfo.COMPARATOR))));
     }
 
     /** verify region boundaries obtained from HTable.getStartEndKeys() */
@@ -343,7 +425,9 @@ public class TestEndToEndSplitTransaction {
     }
   }
 
-  /** Blocks until the region split is complete in hbase:meta and region server opens the daughters */
+  /**
+   * Blocks until the region split is complete in hbase:meta and region server opens the daughters
+   */
   public static void blockUntilRegionSplit(Configuration conf, long timeout,
       final byte[] regionName, boolean waitForDaughters)
       throws IOException, InterruptedException {
@@ -389,10 +473,32 @@ public class TestEndToEndSplitTransaction {
 
         rem = timeout - (System.currentTimeMillis() - start);
         blockUntilRegionIsOpened(conf, rem, daughterB);
+
+        // Compacting the new region to make sure references can be cleaned up
+        compactAndBlockUntilDone(TEST_UTIL.getAdmin(),
+          TEST_UTIL.getMiniHBaseCluster().getRegionServer(0), daughterA.getRegionName());
+        compactAndBlockUntilDone(TEST_UTIL.getAdmin(),
+          TEST_UTIL.getMiniHBaseCluster().getRegionServer(0), daughterB.getRegionName());
+
+        removeCompactedFiles(conn, timeout, daughterA);
+        removeCompactedFiles(conn, timeout, daughterB);
       }
     }
   }
 
+  public static void removeCompactedFiles(Connection conn, long timeout, RegionInfo hri)
+      throws IOException, InterruptedException {
+    log("remove compacted files for : " + hri.getRegionNameAsString());
+    List<HRegion> regions = TEST_UTIL.getHBaseCluster().getRegions(hri.getTable());
+    regions.stream().forEach(r -> {
+      try {
+        r.getStores().get(0).closeAndArchiveCompactedFiles();
+      } catch (IOException ioe) {
+        LOG.error("failed in removing compacted file", ioe);
+      }
+    });
+  }
+
   public static void blockUntilRegionIsInMeta(Connection conn, long timeout, RegionInfo hri)
       throws IOException, InterruptedException {
     log("blocking until region is in META: " + hri.getRegionNameAsString());
@@ -415,7 +521,9 @@ public class TestEndToEndSplitTransaction {
         Table table = conn.getTable(hri.getTable())) {
       byte[] row = hri.getStartKey();
       // Check for null/empty row. If we find one, use a key that is likely to be in first region.
-      if (row == null || row.length <= 0) row = new byte[] { '0' };
+      if (row == null || row.length <= 0) {
+        row = new byte[] { '0' };
+      }
       Get get = new Get(row);
       while (System.currentTimeMillis() - start < timeout) {
         try {

http://git-wip-us.apache.org/repos/asf/hbase/blob/252f1bc5/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestSplitTransactionOnCluster.java
----------------------------------------------------------------------
diff --git a/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestSplitTransactionOnCluster.java b/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestSplitTransactionOnCluster.java
index 95e0112..eb162de 100644
--- a/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestSplitTransactionOnCluster.java
+++ b/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestSplitTransactionOnCluster.java
@@ -31,7 +31,9 @@ import java.util.List;
 import java.util.Map;
 import java.util.Optional;
 import java.util.concurrent.CountDownLatch;
+import java.util.concurrent.TimeUnit;
 import java.util.concurrent.atomic.AtomicBoolean;
+
 import org.apache.hadoop.conf.Configuration;
 import org.apache.hadoop.fs.FileSystem;
 import org.apache.hadoop.fs.Path;
@@ -50,6 +52,7 @@ import org.apache.hadoop.hbase.TableName;
 import org.apache.hadoop.hbase.UnknownRegionException;
 import org.apache.hadoop.hbase.ZooKeeperConnectionException;
 import org.apache.hadoop.hbase.client.Admin;
+import org.apache.hadoop.hbase.client.CompactionState;
 import org.apache.hadoop.hbase.client.Consistency;
 import org.apache.hadoop.hbase.client.Delete;
 import org.apache.hadoop.hbase.client.DoNotRetryRegionException;
@@ -78,6 +81,10 @@ import org.apache.hadoop.hbase.master.assignment.RegionStates;
 import org.apache.hadoop.hbase.procedure2.ProcedureTestingUtility;
 import org.apache.hadoop.hbase.regionserver.compactions.CompactionContext;
 import org.apache.hadoop.hbase.regionserver.throttle.NoLimitThroughputController;
+import org.apache.hadoop.hbase.shaded.protobuf.ProtobufUtil;
+import org.apache.hadoop.hbase.shaded.protobuf.generated.RegionServerStatusProtos.RegionStateTransition.TransitionCode;
+import org.apache.hadoop.hbase.shaded.protobuf.generated.RegionServerStatusProtos.ReportRegionStateTransitionRequest;
+import org.apache.hadoop.hbase.shaded.protobuf.generated.RegionServerStatusProtos.ReportRegionStateTransitionResponse;
 import org.apache.hadoop.hbase.testclassification.LargeTests;
 import org.apache.hadoop.hbase.testclassification.RegionServerTests;
 import org.apache.hadoop.hbase.util.Bytes;
@@ -85,7 +92,10 @@ import org.apache.hadoop.hbase.util.EnvironmentEdgeManager;
 import org.apache.hadoop.hbase.util.FSUtils;
 import org.apache.hadoop.hbase.util.HBaseFsck;
 import org.apache.hadoop.hbase.util.JVMClusterUtil.RegionServerThread;
+import org.apache.hadoop.hbase.util.RetryCounter;
 import org.apache.hadoop.hbase.util.Threads;
+import org.apache.hbase.thirdparty.com.google.protobuf.RpcController;
+import org.apache.hbase.thirdparty.com.google.protobuf.ServiceException;
 import org.apache.zookeeper.KeeperException;
 import org.apache.zookeeper.KeeperException.NodeExistsException;
 import org.junit.After;
@@ -101,14 +111,6 @@ import org.junit.rules.TestName;
 import org.slf4j.Logger;
 import org.slf4j.LoggerFactory;
 
-import org.apache.hbase.thirdparty.com.google.protobuf.RpcController;
-import org.apache.hbase.thirdparty.com.google.protobuf.ServiceException;
-
-import org.apache.hadoop.hbase.shaded.protobuf.ProtobufUtil;
-import org.apache.hadoop.hbase.shaded.protobuf.generated.RegionServerStatusProtos.RegionStateTransition.TransitionCode;
-import org.apache.hadoop.hbase.shaded.protobuf.generated.RegionServerStatusProtos.ReportRegionStateTransitionRequest;
-import org.apache.hadoop.hbase.shaded.protobuf.generated.RegionServerStatusProtos.ReportRegionStateTransitionResponse;
-
 /**
  * The below tests are testing split region against a running cluster
  */
@@ -386,11 +388,18 @@ public class TestSplitTransactionOnCluster {
       // Compact first to ensure we have cleaned up references -- else the split
       // will fail.
       this.admin.compactRegion(daughter.getRegionName());
+      RetryCounter retrier = new RetryCounter(30, 1, TimeUnit.SECONDS);
+      while (CompactionState.NONE != admin.getCompactionStateForRegion(daughter.getRegionName())
+          && retrier.shouldRetry()) {
+        retrier.sleepUntilNextRetry();
+      }
       daughters = cluster.getRegions(tableName);
       HRegion daughterRegion = null;
-      for (HRegion r: daughters) {
+      for (HRegion r : daughters) {
         if (RegionInfo.COMPARATOR.compare(r.getRegionInfo(), daughter) == 0) {
           daughterRegion = r;
+          // Archiving the compacted references file
+          r.getStores().get(0).closeAndArchiveCompactedFiles();
           LOG.info("Found matching HRI: " + daughterRegion);
           break;
         }
@@ -533,11 +542,19 @@ public class TestSplitTransactionOnCluster {
       // Call split.
       this.admin.splitRegion(hri.getRegionName());
       List<HRegion> daughters = checkAndGetDaughters(tableName);
+
       // Before cleanup, get a new master.
       HMaster master = abortAndWaitForMaster();
       // Now call compact on the daughters and clean up any references.
-      for (HRegion daughter: daughters) {
+      for (HRegion daughter : daughters) {
         daughter.compact(true);
+        RetryCounter retrier = new RetryCounter(30, 1, TimeUnit.SECONDS);
+        while (CompactionState.NONE != admin
+            .getCompactionStateForRegion(daughter.getRegionInfo().getRegionName())
+            && retrier.shouldRetry()) {
+          retrier.sleepUntilNextRetry();
+        }
+        daughter.getStores().get(0).closeAndArchiveCompactedFiles();
         assertFalse(daughter.hasReferences());
       }
       // BUT calling compact on the daughters is not enough. The CatalogJanitor looks


[6/8] hbase git commit: HBASE-21047 Object creation of StoreFileScanner thru constructor and close may leave refCount to -1 (Vishal Khandelwal)

Posted by ap...@apache.org.
HBASE-21047 Object creation of StoreFileScanner thru constructor and close may leave refCount to -1 (Vishal Khandelwal)


Project: http://git-wip-us.apache.org/repos/asf/hbase/repo
Commit: http://git-wip-us.apache.org/repos/asf/hbase/commit/971d4840
Tree: http://git-wip-us.apache.org/repos/asf/hbase/tree/971d4840
Diff: http://git-wip-us.apache.org/repos/asf/hbase/diff/971d4840

Branch: refs/heads/branch-1
Commit: 971d48406e4d26dcd4a004fc5543d01362acd3d9
Parents: 5520fa1
Author: Andrew Purtell <ap...@apache.org>
Authored: Thu Aug 16 11:42:15 2018 -0700
Committer: Andrew Purtell <ap...@apache.org>
Committed: Thu Aug 16 11:43:24 2018 -0700

----------------------------------------------------------------------
 .../hadoop/hbase/regionserver/StoreFile.java    | 10 +++++++--
 .../hbase/regionserver/StoreFileScanner.java    |  1 +
 .../hbase/regionserver/TestStoreFile.java       | 23 ++++++++++++++++++++
 3 files changed, 32 insertions(+), 2 deletions(-)
----------------------------------------------------------------------


http://git-wip-us.apache.org/repos/asf/hbase/blob/971d4840/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java
----------------------------------------------------------------------
diff --git a/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java b/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java
index 1e74911..bf20c04 100644
--- a/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java
+++ b/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java
@@ -1219,13 +1219,19 @@ public class StoreFile {
      */
     public StoreFileScanner getStoreFileScanner(boolean cacheBlocks, boolean pread,
         boolean isCompaction, long readPt, long scannerOrder, boolean canOptimizeForNonNullColumn) {
-      // Increment the ref count
-      refCount.incrementAndGet();
       return new StoreFileScanner(this, getScanner(cacheBlocks, pread, isCompaction), !isCompaction,
           reader.hasMVCCInfo(), readPt, scannerOrder, canOptimizeForNonNullColumn);
     }
 
     /**
+     * Increment the ref count associated with the reader when ever a scanner associated with the
+     * reader is opened
+     */
+    void incrementRefCount() {
+      refCount.incrementAndGet();
+    }
+
+    /**
      * Decrement the ref count associated with the reader when ever a scanner associated
      * with the reader is closed
      */

http://git-wip-us.apache.org/repos/asf/hbase/blob/971d4840/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
----------------------------------------------------------------------
diff --git a/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java b/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
index b3f7fa6..7343eaf 100644
--- a/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
+++ b/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
@@ -94,6 +94,7 @@ public class StoreFileScanner implements KeyValueScanner {
     this.hasMVCCInfo = hasMVCC;
     this.scannerOrder = scannerOrder;
     this.canOptimizeForNonNullColumn = canOptimizeForNonNullColumn;
+    this.reader.incrementRefCount();
   }
 
   boolean isPrimaryReplica() {

http://git-wip-us.apache.org/repos/asf/hbase/blob/971d4840/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestStoreFile.java
----------------------------------------------------------------------
diff --git a/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestStoreFile.java b/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestStoreFile.java
index 9c9b4b2..6bd53c6 100644
--- a/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestStoreFile.java
+++ b/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestStoreFile.java
@@ -235,6 +235,29 @@ public class TestStoreFile extends HBaseTestCase {
   }
 
   @Test
+  public void testStoreFileReference() throws Exception {
+    Path f = new Path(ROOT_DIR, getName());
+    HFileContext meta = new HFileContextBuilder().withBlockSize(8 * 1024).build();
+    // Make a store file and write data to it.
+    StoreFile.Writer writer = new StoreFile.WriterBuilder(conf, cacheConf, this.fs).withFilePath(f)
+        .withFileContext(meta).build();
+
+    writeStoreFile(writer);
+    writer.close();
+
+    // Creates a reader for StoreFile
+    StoreFile.Reader reader = new StoreFile.Reader(this.fs, f, cacheConf, conf);
+    StoreFileScanner scanner =
+        new StoreFileScanner(reader, mock(HFileScanner.class), false, false, 0, 0, false);
+
+    // Verify after instantiating scanner refCount is increased
+    assertTrue(scanner.getReader().isReferencedInReads());
+    scanner.close();
+    // Verify after closing scanner refCount is decreased
+    assertFalse(scanner.getReader().isReferencedInReads());
+  }
+
+  @Test
   public void testEmptyStoreFileRestrictKeyRanges() throws Exception {
     StoreFile.Reader reader = mock(StoreFile.Reader.class);
     Store store = mock(Store.class);


[8/8] hbase git commit: HBASE-21047 Object creation of StoreFileScanner thru constructor and close may leave refCount to -1 (Vishal Khandelwal)

Posted by ap...@apache.org.
HBASE-21047 Object creation of StoreFileScanner thru constructor and close may leave refCount to -1 (Vishal Khandelwal)

Conflicts:
	hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java
	hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
	hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestStoreFile.java


Project: http://git-wip-us.apache.org/repos/asf/hbase/repo
Commit: http://git-wip-us.apache.org/repos/asf/hbase/commit/efafa410
Tree: http://git-wip-us.apache.org/repos/asf/hbase/tree/efafa410
Diff: http://git-wip-us.apache.org/repos/asf/hbase/diff/efafa410

Branch: refs/heads/branch-1.3
Commit: efafa4108f75819c27e999a6b9e00fe9a37879ee
Parents: fe55991
Author: Andrew Purtell <ap...@apache.org>
Authored: Thu Aug 16 11:42:15 2018 -0700
Committer: Andrew Purtell <ap...@apache.org>
Committed: Thu Aug 16 12:32:08 2018 -0700

----------------------------------------------------------------------
 .../hadoop/hbase/regionserver/StoreFile.java    | 18 +++++++++-------
 .../hbase/regionserver/StoreFileScanner.java    |  1 +
 .../hbase/regionserver/TestStoreFile.java       | 22 ++++++++++++++++++++
 3 files changed, 34 insertions(+), 7 deletions(-)
----------------------------------------------------------------------


http://git-wip-us.apache.org/repos/asf/hbase/blob/efafa410/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java
----------------------------------------------------------------------
diff --git a/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java b/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java
index 7a9dbe1..013573d 100644
--- a/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java
+++ b/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java
@@ -1213,14 +1213,18 @@ public class StoreFile {
      * @param isCompaction is scanner being used for compaction?
      * @return a scanner
      */
-    public StoreFileScanner getStoreFileScanner(boolean cacheBlocks,
-                                               boolean pread,
-                                               boolean isCompaction, long readPt) {
-      // Increment the ref count
+    public StoreFileScanner getStoreFileScanner(boolean cacheBlocks, boolean pread,
+        boolean isCompaction, long readPt) {
+      return new StoreFileScanner(this, getScanner(cacheBlocks, pread, isCompaction),
+        !isCompaction, reader.hasMVCCInfo(), readPt);
+    }
+
+    /**
+     * Increment the ref count associated with the reader when ever a scanner associated with the
+     * reader is opened
+     */
+    void incrementRefCount() {
       refCount.incrementAndGet();
-      return new StoreFileScanner(this,
-                                 getScanner(cacheBlocks, pread, isCompaction),
-                                 !isCompaction, reader.hasMVCCInfo(), readPt);
     }
 
     /**

http://git-wip-us.apache.org/repos/asf/hbase/blob/efafa410/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
----------------------------------------------------------------------
diff --git a/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java b/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
index 3a50ea9..d94e1d5 100644
--- a/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
+++ b/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
@@ -80,6 +80,7 @@ public class StoreFileScanner implements KeyValueScanner {
     this.hfs = hfs;
     this.enforceMVCC = useMVCC;
     this.hasMVCCInfo = hasMVCC;
+    this.reader.incrementRefCount();
   }
 
   boolean isPrimaryReplica() {

http://git-wip-us.apache.org/repos/asf/hbase/blob/efafa410/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestStoreFile.java
----------------------------------------------------------------------
diff --git a/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestStoreFile.java b/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestStoreFile.java
index da4593b..467f4d4 100644
--- a/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestStoreFile.java
+++ b/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestStoreFile.java
@@ -233,6 +233,28 @@ public class TestStoreFile extends HBaseTestCase {
     assertEquals((LAST_CHAR - FIRST_CHAR + 1) * (LAST_CHAR - FIRST_CHAR + 1), count);
   }
 
+  public void testStoreFileReference() throws Exception {
+    Path f = new Path(ROOT_DIR, getName());
+    HFileContext meta = new HFileContextBuilder().withBlockSize(8 * 1024).build();
+    // Make a store file and write data to it.
+    StoreFile.Writer writer = new StoreFile.WriterBuilder(conf, cacheConf, this.fs).withFilePath(f)
+        .withFileContext(meta).build();
+
+    writeStoreFile(writer);
+    writer.close();
+
+    // Creates a reader for StoreFile
+    StoreFile.Reader reader = new StoreFile.Reader(this.fs, f, cacheConf, conf);
+    StoreFileScanner scanner =
+        new StoreFileScanner(reader, mock(HFileScanner.class), false, false, 0);
+
+    // Verify after instantiating scanner refCount is increased
+    assertTrue(scanner.getReader().isReferencedInReads());
+    scanner.close();
+    // Verify after closing scanner refCount is decreased
+    assertFalse(scanner.getReader().isReferencedInReads());
+  }
+
   public void testEmptyStoreFileRestrictKeyRanges() throws Exception {
     StoreFile.Reader reader = mock(StoreFile.Reader.class);
     Store store = mock(Store.class);


[3/8] hbase git commit: HBASE-21047 Object creation of StoreFileScanner thru constructor and close may leave refCount to -1 (Vishal Khandelwal)

Posted by ap...@apache.org.
HBASE-21047 Object creation of StoreFileScanner thru constructor and close may leave refCount to -1 (Vishal Khandelwal)


Project: http://git-wip-us.apache.org/repos/asf/hbase/repo
Commit: http://git-wip-us.apache.org/repos/asf/hbase/commit/1fa67725
Tree: http://git-wip-us.apache.org/repos/asf/hbase/tree/1fa67725
Diff: http://git-wip-us.apache.org/repos/asf/hbase/diff/1fa67725

Branch: refs/heads/branch-2
Commit: 1fa67725c5406f348dbb2266a8e8324ebd5a20b9
Parents: 7593977
Author: Andrew Purtell <ap...@apache.org>
Authored: Thu Aug 16 11:42:15 2018 -0700
Committer: Andrew Purtell <ap...@apache.org>
Committed: Thu Aug 16 11:42:49 2018 -0700

----------------------------------------------------------------------
 .../hbase/regionserver/StoreFileReader.java     | 10 ++++-
 .../hbase/regionserver/StoreFileScanner.java    |  1 +
 .../hbase/regionserver/TestHStoreFile.java      | 40 +++++++++++++++++---
 3 files changed, 44 insertions(+), 7 deletions(-)
----------------------------------------------------------------------


http://git-wip-us.apache.org/repos/asf/hbase/blob/1fa67725/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileReader.java
----------------------------------------------------------------------
diff --git a/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileReader.java b/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileReader.java
index db7b4f9..aeff1f8 100644
--- a/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileReader.java
+++ b/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileReader.java
@@ -148,13 +148,19 @@ public class StoreFileReader {
    */
   public StoreFileScanner getStoreFileScanner(boolean cacheBlocks, boolean pread,
       boolean isCompaction, long readPt, long scannerOrder, boolean canOptimizeForNonNullColumn) {
-    // Increment the ref count
-    refCount.incrementAndGet();
     return new StoreFileScanner(this, getScanner(cacheBlocks, pread, isCompaction),
         !isCompaction, reader.hasMVCCInfo(), readPt, scannerOrder, canOptimizeForNonNullColumn);
   }
 
   /**
+   * Indicate that the scanner has started reading with this reader. We need to increment the ref
+   * count so reader is not close until some object is holding the lock
+   */
+  void incrementRefCount() {
+    refCount.incrementAndGet();
+  }
+
+  /**
    * Indicate that the scanner has finished reading with this reader. We need to decrement the ref
    * count, and also, if this is not the common pread reader, we should close it.
    */

http://git-wip-us.apache.org/repos/asf/hbase/blob/1fa67725/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
----------------------------------------------------------------------
diff --git a/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java b/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
index 80d0ad7..b5b853a 100644
--- a/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
+++ b/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
@@ -94,6 +94,7 @@ public class StoreFileScanner implements KeyValueScanner {
     this.hasMVCCInfo = hasMVCC;
     this.scannerOrder = scannerOrder;
     this.canOptimizeForNonNullColumn = canOptimizeForNonNullColumn;
+    this.reader.incrementRefCount();
   }
 
   boolean isPrimaryReplica() {

http://git-wip-us.apache.org/repos/asf/hbase/blob/1fa67725/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestHStoreFile.java
----------------------------------------------------------------------
diff --git a/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestHStoreFile.java b/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestHStoreFile.java
index 72da1a3..5cd0403 100644
--- a/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestHStoreFile.java
+++ b/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestHStoreFile.java
@@ -31,6 +31,7 @@ import java.util.Map;
 import java.util.OptionalLong;
 import java.util.TreeSet;
 import java.util.concurrent.atomic.AtomicInteger;
+
 import org.apache.hadoop.conf.Configuration;
 import org.apache.hadoop.fs.FileSystem;
 import org.apache.hadoop.fs.Path;
@@ -39,7 +40,6 @@ import org.apache.hadoop.hbase.CellUtil;
 import org.apache.hadoop.hbase.HBaseClassTestRule;
 import org.apache.hadoop.hbase.HBaseTestCase;
 import org.apache.hadoop.hbase.HBaseTestingUtility;
-import org.apache.hadoop.hbase.HColumnDescriptor;
 import org.apache.hadoop.hbase.HConstants;
 import org.apache.hadoop.hbase.HRegionInfo;
 import org.apache.hadoop.hbase.KeyValue;
@@ -48,6 +48,8 @@ import org.apache.hadoop.hbase.PrivateCellUtil;
 import org.apache.hadoop.hbase.TableName;
 import org.apache.hadoop.hbase.client.ColumnFamilyDescriptor;
 import org.apache.hadoop.hbase.client.ColumnFamilyDescriptorBuilder;
+import org.apache.hadoop.hbase.client.RegionInfo;
+import org.apache.hadoop.hbase.client.RegionInfoBuilder;
 import org.apache.hadoop.hbase.client.Scan;
 import org.apache.hadoop.hbase.io.HFileLink;
 import org.apache.hadoop.hbase.io.encoding.DataBlockEncoding;
@@ -65,6 +67,9 @@ import org.apache.hadoop.hbase.util.BloomFilterFactory;
 import org.apache.hadoop.hbase.util.Bytes;
 import org.apache.hadoop.hbase.util.ChecksumType;
 import org.apache.hadoop.hbase.util.FSUtils;
+import org.apache.hbase.thirdparty.com.google.common.base.Joiner;
+import org.apache.hbase.thirdparty.com.google.common.collect.Iterables;
+import org.apache.hbase.thirdparty.com.google.common.collect.Lists;
 import org.junit.After;
 import org.junit.Before;
 import org.junit.ClassRule;
@@ -74,10 +79,6 @@ import org.mockito.Mockito;
 import org.slf4j.Logger;
 import org.slf4j.LoggerFactory;
 
-import org.apache.hbase.thirdparty.com.google.common.base.Joiner;
-import org.apache.hbase.thirdparty.com.google.common.collect.Iterables;
-import org.apache.hbase.thirdparty.com.google.common.collect.Lists;
-
 /**
  * Test HStoreFile
  */
@@ -213,6 +214,35 @@ public class TestHStoreFile extends HBaseTestCase {
   }
 
   @Test
+  public void testStoreFileReference() throws Exception {
+    final RegionInfo hri =
+        RegionInfoBuilder.newBuilder(TableName.valueOf("testStoreFileReference")).build();
+    HRegionFileSystem regionFs = HRegionFileSystem.createRegionOnFileSystem(conf, fs,
+      new Path(testDir, hri.getTable().getNameAsString()), hri);
+    HFileContext meta = new HFileContextBuilder().withBlockSize(8 * 1024).build();
+
+    // Make a store file and write data to it.
+    StoreFileWriter writer = new StoreFileWriter.Builder(conf, cacheConf, this.fs)
+        .withFilePath(regionFs.createTempName()).withFileContext(meta).build();
+    writeStoreFile(writer);
+    Path hsfPath = regionFs.commitStoreFile(TEST_FAMILY, writer.getPath());
+    writer.close();
+
+    HStoreFile file = new HStoreFile(this.fs, hsfPath, conf, cacheConf, BloomType.NONE, true);
+    file.initReader();
+    StoreFileReader r = file.getReader();
+    assertNotNull(r);
+    StoreFileScanner scanner =
+        new StoreFileScanner(r, mock(HFileScanner.class), false, false, 0, 0, false);
+
+    // Verify after instantiating scanner refCount is increased
+    assertTrue("Verify file is being referenced", file.isReferencedInReads());
+    scanner.close();
+    // Verify after closing scanner refCount is decreased
+    assertFalse("Verify file is not being referenced", file.isReferencedInReads());
+  }
+
+  @Test
   public void testEmptyStoreFileRestrictKeyRanges() throws Exception {
     StoreFileReader reader = mock(StoreFileReader.class);
     HStore store = mock(HStore.class);


[4/8] hbase git commit: HBASE-21047 Object creation of StoreFileScanner thru constructor and close may leave refCount to -1 (Vishal Khandelwal)

Posted by ap...@apache.org.
HBASE-21047 Object creation of StoreFileScanner thru constructor and close may leave refCount to -1 (Vishal Khandelwal)


Project: http://git-wip-us.apache.org/repos/asf/hbase/repo
Commit: http://git-wip-us.apache.org/repos/asf/hbase/commit/b4994101
Tree: http://git-wip-us.apache.org/repos/asf/hbase/tree/b4994101
Diff: http://git-wip-us.apache.org/repos/asf/hbase/diff/b4994101

Branch: refs/heads/branch-2.1
Commit: b49941012a2f414d44ee96cf35e0e8d2eef38b98
Parents: 145c92f
Author: Andrew Purtell <ap...@apache.org>
Authored: Thu Aug 16 11:42:15 2018 -0700
Committer: Andrew Purtell <ap...@apache.org>
Committed: Thu Aug 16 11:42:54 2018 -0700

----------------------------------------------------------------------
 .../hbase/regionserver/StoreFileReader.java     | 10 ++++-
 .../hbase/regionserver/StoreFileScanner.java    |  1 +
 .../hbase/regionserver/TestHStoreFile.java      | 40 +++++++++++++++++---
 3 files changed, 44 insertions(+), 7 deletions(-)
----------------------------------------------------------------------


http://git-wip-us.apache.org/repos/asf/hbase/blob/b4994101/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileReader.java
----------------------------------------------------------------------
diff --git a/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileReader.java b/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileReader.java
index db7b4f9..aeff1f8 100644
--- a/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileReader.java
+++ b/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileReader.java
@@ -148,13 +148,19 @@ public class StoreFileReader {
    */
   public StoreFileScanner getStoreFileScanner(boolean cacheBlocks, boolean pread,
       boolean isCompaction, long readPt, long scannerOrder, boolean canOptimizeForNonNullColumn) {
-    // Increment the ref count
-    refCount.incrementAndGet();
     return new StoreFileScanner(this, getScanner(cacheBlocks, pread, isCompaction),
         !isCompaction, reader.hasMVCCInfo(), readPt, scannerOrder, canOptimizeForNonNullColumn);
   }
 
   /**
+   * Indicate that the scanner has started reading with this reader. We need to increment the ref
+   * count so reader is not close until some object is holding the lock
+   */
+  void incrementRefCount() {
+    refCount.incrementAndGet();
+  }
+
+  /**
    * Indicate that the scanner has finished reading with this reader. We need to decrement the ref
    * count, and also, if this is not the common pread reader, we should close it.
    */

http://git-wip-us.apache.org/repos/asf/hbase/blob/b4994101/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
----------------------------------------------------------------------
diff --git a/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java b/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
index 80d0ad7..b5b853a 100644
--- a/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
+++ b/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
@@ -94,6 +94,7 @@ public class StoreFileScanner implements KeyValueScanner {
     this.hasMVCCInfo = hasMVCC;
     this.scannerOrder = scannerOrder;
     this.canOptimizeForNonNullColumn = canOptimizeForNonNullColumn;
+    this.reader.incrementRefCount();
   }
 
   boolean isPrimaryReplica() {

http://git-wip-us.apache.org/repos/asf/hbase/blob/b4994101/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestHStoreFile.java
----------------------------------------------------------------------
diff --git a/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestHStoreFile.java b/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestHStoreFile.java
index 72da1a3..5cd0403 100644
--- a/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestHStoreFile.java
+++ b/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestHStoreFile.java
@@ -31,6 +31,7 @@ import java.util.Map;
 import java.util.OptionalLong;
 import java.util.TreeSet;
 import java.util.concurrent.atomic.AtomicInteger;
+
 import org.apache.hadoop.conf.Configuration;
 import org.apache.hadoop.fs.FileSystem;
 import org.apache.hadoop.fs.Path;
@@ -39,7 +40,6 @@ import org.apache.hadoop.hbase.CellUtil;
 import org.apache.hadoop.hbase.HBaseClassTestRule;
 import org.apache.hadoop.hbase.HBaseTestCase;
 import org.apache.hadoop.hbase.HBaseTestingUtility;
-import org.apache.hadoop.hbase.HColumnDescriptor;
 import org.apache.hadoop.hbase.HConstants;
 import org.apache.hadoop.hbase.HRegionInfo;
 import org.apache.hadoop.hbase.KeyValue;
@@ -48,6 +48,8 @@ import org.apache.hadoop.hbase.PrivateCellUtil;
 import org.apache.hadoop.hbase.TableName;
 import org.apache.hadoop.hbase.client.ColumnFamilyDescriptor;
 import org.apache.hadoop.hbase.client.ColumnFamilyDescriptorBuilder;
+import org.apache.hadoop.hbase.client.RegionInfo;
+import org.apache.hadoop.hbase.client.RegionInfoBuilder;
 import org.apache.hadoop.hbase.client.Scan;
 import org.apache.hadoop.hbase.io.HFileLink;
 import org.apache.hadoop.hbase.io.encoding.DataBlockEncoding;
@@ -65,6 +67,9 @@ import org.apache.hadoop.hbase.util.BloomFilterFactory;
 import org.apache.hadoop.hbase.util.Bytes;
 import org.apache.hadoop.hbase.util.ChecksumType;
 import org.apache.hadoop.hbase.util.FSUtils;
+import org.apache.hbase.thirdparty.com.google.common.base.Joiner;
+import org.apache.hbase.thirdparty.com.google.common.collect.Iterables;
+import org.apache.hbase.thirdparty.com.google.common.collect.Lists;
 import org.junit.After;
 import org.junit.Before;
 import org.junit.ClassRule;
@@ -74,10 +79,6 @@ import org.mockito.Mockito;
 import org.slf4j.Logger;
 import org.slf4j.LoggerFactory;
 
-import org.apache.hbase.thirdparty.com.google.common.base.Joiner;
-import org.apache.hbase.thirdparty.com.google.common.collect.Iterables;
-import org.apache.hbase.thirdparty.com.google.common.collect.Lists;
-
 /**
  * Test HStoreFile
  */
@@ -213,6 +214,35 @@ public class TestHStoreFile extends HBaseTestCase {
   }
 
   @Test
+  public void testStoreFileReference() throws Exception {
+    final RegionInfo hri =
+        RegionInfoBuilder.newBuilder(TableName.valueOf("testStoreFileReference")).build();
+    HRegionFileSystem regionFs = HRegionFileSystem.createRegionOnFileSystem(conf, fs,
+      new Path(testDir, hri.getTable().getNameAsString()), hri);
+    HFileContext meta = new HFileContextBuilder().withBlockSize(8 * 1024).build();
+
+    // Make a store file and write data to it.
+    StoreFileWriter writer = new StoreFileWriter.Builder(conf, cacheConf, this.fs)
+        .withFilePath(regionFs.createTempName()).withFileContext(meta).build();
+    writeStoreFile(writer);
+    Path hsfPath = regionFs.commitStoreFile(TEST_FAMILY, writer.getPath());
+    writer.close();
+
+    HStoreFile file = new HStoreFile(this.fs, hsfPath, conf, cacheConf, BloomType.NONE, true);
+    file.initReader();
+    StoreFileReader r = file.getReader();
+    assertNotNull(r);
+    StoreFileScanner scanner =
+        new StoreFileScanner(r, mock(HFileScanner.class), false, false, 0, 0, false);
+
+    // Verify after instantiating scanner refCount is increased
+    assertTrue("Verify file is being referenced", file.isReferencedInReads());
+    scanner.close();
+    // Verify after closing scanner refCount is decreased
+    assertFalse("Verify file is not being referenced", file.isReferencedInReads());
+  }
+
+  @Test
   public void testEmptyStoreFileRestrictKeyRanges() throws Exception {
     StoreFileReader reader = mock(StoreFileReader.class);
     HStore store = mock(HStore.class);


[7/8] hbase git commit: HBASE-21047 Object creation of StoreFileScanner thru constructor and close may leave refCount to -1 (Vishal Khandelwal)

Posted by ap...@apache.org.
HBASE-21047 Object creation of StoreFileScanner thru constructor and close may leave refCount to -1 (Vishal Khandelwal)


Project: http://git-wip-us.apache.org/repos/asf/hbase/repo
Commit: http://git-wip-us.apache.org/repos/asf/hbase/commit/9e5a1cb2
Tree: http://git-wip-us.apache.org/repos/asf/hbase/tree/9e5a1cb2
Diff: http://git-wip-us.apache.org/repos/asf/hbase/diff/9e5a1cb2

Branch: refs/heads/branch-1.4
Commit: 9e5a1cb2ba71583e12f2d9fadd2bc82e911cdac8
Parents: 472a13a
Author: Andrew Purtell <ap...@apache.org>
Authored: Thu Aug 16 11:42:15 2018 -0700
Committer: Andrew Purtell <ap...@apache.org>
Committed: Thu Aug 16 11:43:32 2018 -0700

----------------------------------------------------------------------
 .../hadoop/hbase/regionserver/StoreFile.java    | 10 +++++++--
 .../hbase/regionserver/StoreFileScanner.java    |  1 +
 .../hbase/regionserver/TestStoreFile.java       | 23 ++++++++++++++++++++
 3 files changed, 32 insertions(+), 2 deletions(-)
----------------------------------------------------------------------


http://git-wip-us.apache.org/repos/asf/hbase/blob/9e5a1cb2/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java
----------------------------------------------------------------------
diff --git a/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java b/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java
index 803bfb3..06cc57c 100644
--- a/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java
+++ b/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java
@@ -1209,13 +1209,19 @@ public class StoreFile {
      */
     public StoreFileScanner getStoreFileScanner(boolean cacheBlocks, boolean pread,
         boolean isCompaction, long readPt, long scannerOrder, boolean canOptimizeForNonNullColumn) {
-      // Increment the ref count
-      refCount.incrementAndGet();
       return new StoreFileScanner(this, getScanner(cacheBlocks, pread, isCompaction), !isCompaction,
           reader.hasMVCCInfo(), readPt, scannerOrder, canOptimizeForNonNullColumn);
     }
 
     /**
+     * Increment the ref count associated with the reader when ever a scanner associated with the
+     * reader is opened
+     */
+    void incrementRefCount() {
+      refCount.incrementAndGet();
+    }
+
+    /**
      * Decrement the ref count associated with the reader when ever a scanner associated
      * with the reader is closed
      */

http://git-wip-us.apache.org/repos/asf/hbase/blob/9e5a1cb2/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
----------------------------------------------------------------------
diff --git a/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java b/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
index b3f7fa6..7343eaf 100644
--- a/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
+++ b/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
@@ -94,6 +94,7 @@ public class StoreFileScanner implements KeyValueScanner {
     this.hasMVCCInfo = hasMVCC;
     this.scannerOrder = scannerOrder;
     this.canOptimizeForNonNullColumn = canOptimizeForNonNullColumn;
+    this.reader.incrementRefCount();
   }
 
   boolean isPrimaryReplica() {

http://git-wip-us.apache.org/repos/asf/hbase/blob/9e5a1cb2/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestStoreFile.java
----------------------------------------------------------------------
diff --git a/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestStoreFile.java b/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestStoreFile.java
index 9c9b4b2..6bd53c6 100644
--- a/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestStoreFile.java
+++ b/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestStoreFile.java
@@ -235,6 +235,29 @@ public class TestStoreFile extends HBaseTestCase {
   }
 
   @Test
+  public void testStoreFileReference() throws Exception {
+    Path f = new Path(ROOT_DIR, getName());
+    HFileContext meta = new HFileContextBuilder().withBlockSize(8 * 1024).build();
+    // Make a store file and write data to it.
+    StoreFile.Writer writer = new StoreFile.WriterBuilder(conf, cacheConf, this.fs).withFilePath(f)
+        .withFileContext(meta).build();
+
+    writeStoreFile(writer);
+    writer.close();
+
+    // Creates a reader for StoreFile
+    StoreFile.Reader reader = new StoreFile.Reader(this.fs, f, cacheConf, conf);
+    StoreFileScanner scanner =
+        new StoreFileScanner(reader, mock(HFileScanner.class), false, false, 0, 0, false);
+
+    // Verify after instantiating scanner refCount is increased
+    assertTrue(scanner.getReader().isReferencedInReads());
+    scanner.close();
+    // Verify after closing scanner refCount is decreased
+    assertFalse(scanner.getReader().isReferencedInReads());
+  }
+
+  @Test
   public void testEmptyStoreFileRestrictKeyRanges() throws Exception {
     StoreFile.Reader reader = mock(StoreFile.Reader.class);
     Store store = mock(Store.class);


[2/8] hbase git commit: HBASE-21047 Object creation of StoreFileScanner thru constructor and close may leave refCount to -1 (Vishal Khandelwal)

Posted by ap...@apache.org.
HBASE-21047 Object creation of StoreFileScanner thru constructor and close may leave refCount to -1 (Vishal Khandelwal)


Project: http://git-wip-us.apache.org/repos/asf/hbase/repo
Commit: http://git-wip-us.apache.org/repos/asf/hbase/commit/1dbd6fa9
Tree: http://git-wip-us.apache.org/repos/asf/hbase/tree/1dbd6fa9
Diff: http://git-wip-us.apache.org/repos/asf/hbase/diff/1dbd6fa9

Branch: refs/heads/master
Commit: 1dbd6fa993ba9f6adbbac942e39ac5cd67fa8ee2
Parents: 2cfe1e8
Author: Andrew Purtell <ap...@apache.org>
Authored: Thu Aug 16 11:42:15 2018 -0700
Committer: Andrew Purtell <ap...@apache.org>
Committed: Thu Aug 16 11:42:15 2018 -0700

----------------------------------------------------------------------
 .../hbase/regionserver/StoreFileReader.java     | 10 ++++-
 .../hbase/regionserver/StoreFileScanner.java    |  1 +
 .../hbase/regionserver/TestHStoreFile.java      | 40 +++++++++++++++++---
 3 files changed, 44 insertions(+), 7 deletions(-)
----------------------------------------------------------------------


http://git-wip-us.apache.org/repos/asf/hbase/blob/1dbd6fa9/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileReader.java
----------------------------------------------------------------------
diff --git a/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileReader.java b/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileReader.java
index db7b4f9..aeff1f8 100644
--- a/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileReader.java
+++ b/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileReader.java
@@ -148,13 +148,19 @@ public class StoreFileReader {
    */
   public StoreFileScanner getStoreFileScanner(boolean cacheBlocks, boolean pread,
       boolean isCompaction, long readPt, long scannerOrder, boolean canOptimizeForNonNullColumn) {
-    // Increment the ref count
-    refCount.incrementAndGet();
     return new StoreFileScanner(this, getScanner(cacheBlocks, pread, isCompaction),
         !isCompaction, reader.hasMVCCInfo(), readPt, scannerOrder, canOptimizeForNonNullColumn);
   }
 
   /**
+   * Indicate that the scanner has started reading with this reader. We need to increment the ref
+   * count so reader is not close until some object is holding the lock
+   */
+  void incrementRefCount() {
+    refCount.incrementAndGet();
+  }
+
+  /**
    * Indicate that the scanner has finished reading with this reader. We need to decrement the ref
    * count, and also, if this is not the common pread reader, we should close it.
    */

http://git-wip-us.apache.org/repos/asf/hbase/blob/1dbd6fa9/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
----------------------------------------------------------------------
diff --git a/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java b/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
index 80d0ad7..b5b853a 100644
--- a/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
+++ b/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
@@ -94,6 +94,7 @@ public class StoreFileScanner implements KeyValueScanner {
     this.hasMVCCInfo = hasMVCC;
     this.scannerOrder = scannerOrder;
     this.canOptimizeForNonNullColumn = canOptimizeForNonNullColumn;
+    this.reader.incrementRefCount();
   }
 
   boolean isPrimaryReplica() {

http://git-wip-us.apache.org/repos/asf/hbase/blob/1dbd6fa9/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestHStoreFile.java
----------------------------------------------------------------------
diff --git a/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestHStoreFile.java b/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestHStoreFile.java
index 72da1a3..5cd0403 100644
--- a/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestHStoreFile.java
+++ b/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestHStoreFile.java
@@ -31,6 +31,7 @@ import java.util.Map;
 import java.util.OptionalLong;
 import java.util.TreeSet;
 import java.util.concurrent.atomic.AtomicInteger;
+
 import org.apache.hadoop.conf.Configuration;
 import org.apache.hadoop.fs.FileSystem;
 import org.apache.hadoop.fs.Path;
@@ -39,7 +40,6 @@ import org.apache.hadoop.hbase.CellUtil;
 import org.apache.hadoop.hbase.HBaseClassTestRule;
 import org.apache.hadoop.hbase.HBaseTestCase;
 import org.apache.hadoop.hbase.HBaseTestingUtility;
-import org.apache.hadoop.hbase.HColumnDescriptor;
 import org.apache.hadoop.hbase.HConstants;
 import org.apache.hadoop.hbase.HRegionInfo;
 import org.apache.hadoop.hbase.KeyValue;
@@ -48,6 +48,8 @@ import org.apache.hadoop.hbase.PrivateCellUtil;
 import org.apache.hadoop.hbase.TableName;
 import org.apache.hadoop.hbase.client.ColumnFamilyDescriptor;
 import org.apache.hadoop.hbase.client.ColumnFamilyDescriptorBuilder;
+import org.apache.hadoop.hbase.client.RegionInfo;
+import org.apache.hadoop.hbase.client.RegionInfoBuilder;
 import org.apache.hadoop.hbase.client.Scan;
 import org.apache.hadoop.hbase.io.HFileLink;
 import org.apache.hadoop.hbase.io.encoding.DataBlockEncoding;
@@ -65,6 +67,9 @@ import org.apache.hadoop.hbase.util.BloomFilterFactory;
 import org.apache.hadoop.hbase.util.Bytes;
 import org.apache.hadoop.hbase.util.ChecksumType;
 import org.apache.hadoop.hbase.util.FSUtils;
+import org.apache.hbase.thirdparty.com.google.common.base.Joiner;
+import org.apache.hbase.thirdparty.com.google.common.collect.Iterables;
+import org.apache.hbase.thirdparty.com.google.common.collect.Lists;
 import org.junit.After;
 import org.junit.Before;
 import org.junit.ClassRule;
@@ -74,10 +79,6 @@ import org.mockito.Mockito;
 import org.slf4j.Logger;
 import org.slf4j.LoggerFactory;
 
-import org.apache.hbase.thirdparty.com.google.common.base.Joiner;
-import org.apache.hbase.thirdparty.com.google.common.collect.Iterables;
-import org.apache.hbase.thirdparty.com.google.common.collect.Lists;
-
 /**
  * Test HStoreFile
  */
@@ -213,6 +214,35 @@ public class TestHStoreFile extends HBaseTestCase {
   }
 
   @Test
+  public void testStoreFileReference() throws Exception {
+    final RegionInfo hri =
+        RegionInfoBuilder.newBuilder(TableName.valueOf("testStoreFileReference")).build();
+    HRegionFileSystem regionFs = HRegionFileSystem.createRegionOnFileSystem(conf, fs,
+      new Path(testDir, hri.getTable().getNameAsString()), hri);
+    HFileContext meta = new HFileContextBuilder().withBlockSize(8 * 1024).build();
+
+    // Make a store file and write data to it.
+    StoreFileWriter writer = new StoreFileWriter.Builder(conf, cacheConf, this.fs)
+        .withFilePath(regionFs.createTempName()).withFileContext(meta).build();
+    writeStoreFile(writer);
+    Path hsfPath = regionFs.commitStoreFile(TEST_FAMILY, writer.getPath());
+    writer.close();
+
+    HStoreFile file = new HStoreFile(this.fs, hsfPath, conf, cacheConf, BloomType.NONE, true);
+    file.initReader();
+    StoreFileReader r = file.getReader();
+    assertNotNull(r);
+    StoreFileScanner scanner =
+        new StoreFileScanner(r, mock(HFileScanner.class), false, false, 0, 0, false);
+
+    // Verify after instantiating scanner refCount is increased
+    assertTrue("Verify file is being referenced", file.isReferencedInReads());
+    scanner.close();
+    // Verify after closing scanner refCount is decreased
+    assertFalse("Verify file is not being referenced", file.isReferencedInReads());
+  }
+
+  @Test
   public void testEmptyStoreFileRestrictKeyRanges() throws Exception {
     StoreFileReader reader = mock(StoreFileReader.class);
     HStore store = mock(HStore.class);


[5/8] hbase git commit: HBASE-21047 Object creation of StoreFileScanner thru constructor and close may leave refCount to -1 (Vishal Khandelwal)

Posted by ap...@apache.org.
HBASE-21047 Object creation of StoreFileScanner thru constructor and close may leave refCount to -1 (Vishal Khandelwal)


Project: http://git-wip-us.apache.org/repos/asf/hbase/repo
Commit: http://git-wip-us.apache.org/repos/asf/hbase/commit/7564efaf
Tree: http://git-wip-us.apache.org/repos/asf/hbase/tree/7564efaf
Diff: http://git-wip-us.apache.org/repos/asf/hbase/diff/7564efaf

Branch: refs/heads/branch-2.0
Commit: 7564efaf9351f40e26458fa25155858db725faa1
Parents: 252f1bc
Author: Andrew Purtell <ap...@apache.org>
Authored: Thu Aug 16 11:42:15 2018 -0700
Committer: Andrew Purtell <ap...@apache.org>
Committed: Thu Aug 16 11:42:58 2018 -0700

----------------------------------------------------------------------
 .../hbase/regionserver/StoreFileReader.java     | 10 ++++-
 .../hbase/regionserver/StoreFileScanner.java    |  1 +
 .../hbase/regionserver/TestHStoreFile.java      | 40 +++++++++++++++++---
 3 files changed, 44 insertions(+), 7 deletions(-)
----------------------------------------------------------------------


http://git-wip-us.apache.org/repos/asf/hbase/blob/7564efaf/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileReader.java
----------------------------------------------------------------------
diff --git a/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileReader.java b/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileReader.java
index db7b4f9..aeff1f8 100644
--- a/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileReader.java
+++ b/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileReader.java
@@ -148,13 +148,19 @@ public class StoreFileReader {
    */
   public StoreFileScanner getStoreFileScanner(boolean cacheBlocks, boolean pread,
       boolean isCompaction, long readPt, long scannerOrder, boolean canOptimizeForNonNullColumn) {
-    // Increment the ref count
-    refCount.incrementAndGet();
     return new StoreFileScanner(this, getScanner(cacheBlocks, pread, isCompaction),
         !isCompaction, reader.hasMVCCInfo(), readPt, scannerOrder, canOptimizeForNonNullColumn);
   }
 
   /**
+   * Indicate that the scanner has started reading with this reader. We need to increment the ref
+   * count so reader is not close until some object is holding the lock
+   */
+  void incrementRefCount() {
+    refCount.incrementAndGet();
+  }
+
+  /**
    * Indicate that the scanner has finished reading with this reader. We need to decrement the ref
    * count, and also, if this is not the common pread reader, we should close it.
    */

http://git-wip-us.apache.org/repos/asf/hbase/blob/7564efaf/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
----------------------------------------------------------------------
diff --git a/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java b/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
index 80d0ad7..b5b853a 100644
--- a/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
+++ b/hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
@@ -94,6 +94,7 @@ public class StoreFileScanner implements KeyValueScanner {
     this.hasMVCCInfo = hasMVCC;
     this.scannerOrder = scannerOrder;
     this.canOptimizeForNonNullColumn = canOptimizeForNonNullColumn;
+    this.reader.incrementRefCount();
   }
 
   boolean isPrimaryReplica() {

http://git-wip-us.apache.org/repos/asf/hbase/blob/7564efaf/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestHStoreFile.java
----------------------------------------------------------------------
diff --git a/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestHStoreFile.java b/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestHStoreFile.java
index 72da1a3..5cd0403 100644
--- a/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestHStoreFile.java
+++ b/hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestHStoreFile.java
@@ -31,6 +31,7 @@ import java.util.Map;
 import java.util.OptionalLong;
 import java.util.TreeSet;
 import java.util.concurrent.atomic.AtomicInteger;
+
 import org.apache.hadoop.conf.Configuration;
 import org.apache.hadoop.fs.FileSystem;
 import org.apache.hadoop.fs.Path;
@@ -39,7 +40,6 @@ import org.apache.hadoop.hbase.CellUtil;
 import org.apache.hadoop.hbase.HBaseClassTestRule;
 import org.apache.hadoop.hbase.HBaseTestCase;
 import org.apache.hadoop.hbase.HBaseTestingUtility;
-import org.apache.hadoop.hbase.HColumnDescriptor;
 import org.apache.hadoop.hbase.HConstants;
 import org.apache.hadoop.hbase.HRegionInfo;
 import org.apache.hadoop.hbase.KeyValue;
@@ -48,6 +48,8 @@ import org.apache.hadoop.hbase.PrivateCellUtil;
 import org.apache.hadoop.hbase.TableName;
 import org.apache.hadoop.hbase.client.ColumnFamilyDescriptor;
 import org.apache.hadoop.hbase.client.ColumnFamilyDescriptorBuilder;
+import org.apache.hadoop.hbase.client.RegionInfo;
+import org.apache.hadoop.hbase.client.RegionInfoBuilder;
 import org.apache.hadoop.hbase.client.Scan;
 import org.apache.hadoop.hbase.io.HFileLink;
 import org.apache.hadoop.hbase.io.encoding.DataBlockEncoding;
@@ -65,6 +67,9 @@ import org.apache.hadoop.hbase.util.BloomFilterFactory;
 import org.apache.hadoop.hbase.util.Bytes;
 import org.apache.hadoop.hbase.util.ChecksumType;
 import org.apache.hadoop.hbase.util.FSUtils;
+import org.apache.hbase.thirdparty.com.google.common.base.Joiner;
+import org.apache.hbase.thirdparty.com.google.common.collect.Iterables;
+import org.apache.hbase.thirdparty.com.google.common.collect.Lists;
 import org.junit.After;
 import org.junit.Before;
 import org.junit.ClassRule;
@@ -74,10 +79,6 @@ import org.mockito.Mockito;
 import org.slf4j.Logger;
 import org.slf4j.LoggerFactory;
 
-import org.apache.hbase.thirdparty.com.google.common.base.Joiner;
-import org.apache.hbase.thirdparty.com.google.common.collect.Iterables;
-import org.apache.hbase.thirdparty.com.google.common.collect.Lists;
-
 /**
  * Test HStoreFile
  */
@@ -213,6 +214,35 @@ public class TestHStoreFile extends HBaseTestCase {
   }
 
   @Test
+  public void testStoreFileReference() throws Exception {
+    final RegionInfo hri =
+        RegionInfoBuilder.newBuilder(TableName.valueOf("testStoreFileReference")).build();
+    HRegionFileSystem regionFs = HRegionFileSystem.createRegionOnFileSystem(conf, fs,
+      new Path(testDir, hri.getTable().getNameAsString()), hri);
+    HFileContext meta = new HFileContextBuilder().withBlockSize(8 * 1024).build();
+
+    // Make a store file and write data to it.
+    StoreFileWriter writer = new StoreFileWriter.Builder(conf, cacheConf, this.fs)
+        .withFilePath(regionFs.createTempName()).withFileContext(meta).build();
+    writeStoreFile(writer);
+    Path hsfPath = regionFs.commitStoreFile(TEST_FAMILY, writer.getPath());
+    writer.close();
+
+    HStoreFile file = new HStoreFile(this.fs, hsfPath, conf, cacheConf, BloomType.NONE, true);
+    file.initReader();
+    StoreFileReader r = file.getReader();
+    assertNotNull(r);
+    StoreFileScanner scanner =
+        new StoreFileScanner(r, mock(HFileScanner.class), false, false, 0, 0, false);
+
+    // Verify after instantiating scanner refCount is increased
+    assertTrue("Verify file is being referenced", file.isReferencedInReads());
+    scanner.close();
+    // Verify after closing scanner refCount is decreased
+    assertFalse("Verify file is not being referenced", file.isReferencedInReads());
+  }
+
+  @Test
   public void testEmptyStoreFileRestrictKeyRanges() throws Exception {
     StoreFileReader reader = mock(StoreFileReader.class);
     HStore store = mock(HStore.class);