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Posted to issues@airavata.apache.org by "Suresh Marru (JIRA)" <ji...@apache.org> on 2015/08/03 06:22:04 UTC

[jira] [Closed] (AIRAVATA-467) Allow user to set parameter options like -p -m to run jobs with GFAC

     [ https://issues.apache.org/jira/browse/AIRAVATA-467?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]

Suresh Marru closed AIRAVATA-467.
---------------------------------

verified in test-drive for 0.15 release branch.

> Allow user to set parameter options like -p <value> -m <value> to run jobs with GFAC
> ------------------------------------------------------------------------------------
>
>                 Key: AIRAVATA-467
>                 URL: https://issues.apache.org/jira/browse/AIRAVATA-467
>             Project: Airavata
>          Issue Type: Improvement
>          Components: GFac
>    Affects Versions: 0.4-INCUBATING
>            Reporter: Raminderjeet Singh
>            Assignee: Lahiru Gunathilake
>             Fix For: 0.15 
>
>
> Some of the application need options before the parameter to run as shown in example below. This requirement is true for different GFAC providers. 
> /home1/01437/ogce/biodrugscreen/bdsreening.py  -p <receptor.pdb> -m <receptor.mol2> -q <receptor.pdbqt> -l <lig.mol2> -x <cx> -y <cy> -z <cz> -u <docked.mol2> -v <scores>



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