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Posted to notifications@superset.apache.org by GitBox <gi...@apache.org> on 2019/05/24 03:34:31 UTC
[GitHub] [incubator-superset] zoneyang opened a new issue #7589: Unable to
upgrade mysql database from 0.29.0rc8
zoneyang opened a new issue #7589: Unable to upgrade mysql database from 0.29.0rc8
URL: https://github.com/apache/incubator-superset/issues/7589
**I have tried to upgrade mysql database from 0.29.0rc8 to 0.31.0rc18, 0.32.0rc2 or 0.33.0rc1, but the same error raised.After I input "superset db upgrade", then the error shows below:**
INFO [alembic.runtime.migration] Context impl MySQLImpl.
INFO [alembic.runtime.migration] Will assume transactional DDL.
INFO [alembic.runtime.migration] Running upgrade 55e910a74826 -> 4ce8df208545, empty message
scanning dashboard (1/1) >>>>
INFO [alembic.runtime.migration] Running upgrade 4ce8df208545 -> 46f444d8b9b7, remove_coordinator_from_druid_cluster_model.py
INFO [alembic.runtime.migration] Running upgrade 46f444d8b9b7 -> a61b40f9f57f, remove allow_run_sync
INFO [alembic.runtime.migration] Running upgrade a61b40f9f57f -> 6c7537a6004a, models for email reports
INFO [alembic.runtime.migration] Running upgrade 6c7537a6004a -> 3e1b21cd94a4, change_owner_to_m2m_relation_on_datasources.py
Traceback (most recent call last):
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1244, in _execute_context
cursor, statement, parameters, context
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/sqlalchemy/engine/default.py", line 552, in do_execute
cursor.execute(statement, parameters)
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/MySQLdb/cursors.py", line 206, in execute
res = self._query(query)
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/MySQLdb/cursors.py", line 312, in _query
db.query(q)
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/MySQLdb/connections.py", line 224, in query
_mysql.connection.query(self, query)
MySQLdb._exceptions.OperationalError: (1091, "Can't DROP 'user_id'; check that column/key exists")
The above exception was the direct cause of the following exception:
Traceback (most recent call last):
File "/home/test/work/ccsuperset/venv/bin/superset", line 6, in <module>
exec(compile(open(__file__).read(), __file__, 'exec'))
File "/home/test/work/ccsuperset/superset/bin/superset", line 35, in <module>
cli()
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/click/core.py", line 722, in __call__
return self.main(*args, **kwargs)
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/flask/cli.py", line 569, in main
return super(FlaskGroup, self).main(*args, **kwargs)
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/click/core.py", line 697, in main
rv = self.invoke(ctx)
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/click/core.py", line 1066, in invoke
return _process_result(sub_ctx.command.invoke(sub_ctx))
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/click/core.py", line 1066, in invoke
return _process_result(sub_ctx.command.invoke(sub_ctx))
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/click/core.py", line 895, in invoke
return ctx.invoke(self.callback, **ctx.params)
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/click/core.py", line 535, in invoke
return callback(*args, **kwargs)
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/click/decorators.py", line 17, in new_func
return f(get_current_context(), *args, **kwargs)
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/flask/cli.py", line 419, in decorator
return __ctx.invoke(f, *args, **kwargs)
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/click/core.py", line 535, in invoke
return callback(*args, **kwargs)
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/flask_migrate/cli.py", line 134, in upgrade
_upgrade(directory, revision, sql, tag, x_arg)
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/flask_migrate/__init__.py", line 95, in wrapped
f(*args, **kwargs)
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/flask_migrate/__init__.py", line 280, in upgrade
command.upgrade(config, revision, sql=sql, tag=tag)
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/alembic/command.py", line 276, in upgrade
script.run_env()
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/alembic/script/base.py", line 475, in run_env
util.load_python_file(self.dir, "env.py")
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/alembic/util/pyfiles.py", line 90, in load_python_file
module = load_module_py(module_id, path)
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/alembic/util/compat.py", line 156, in load_module_py
spec.loader.exec_module(module)
File "<frozen importlib._bootstrap_external>", line 678, in exec_module
File "<frozen importlib._bootstrap>", line 219, in _call_with_frames_removed
File "/home/test/work/ccsuperset/superset/migrations/env.py", line 116, in <module>
run_migrations_online()
File "/home/test/work/ccsuperset/superset/migrations/env.py", line 109, in run_migrations_online
context.run_migrations()
File "<string>", line 8, in run_migrations
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/alembic/runtime/environment.py", line 839, in run_migrations
self.get_context().run_migrations(**kw)
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/alembic/runtime/migration.py", line 361, in run_migrations
step.migration_fn(**kw)
File "/home/test/work/ccsuperset/superset/migrations/versions/3e1b21cd94a4_change_owner_to_m2m_relation_on_.py", line 102, in upgrade
batch_op.drop_column('user_id')
File "/usr/lib/python3.6/contextlib.py", line 88, in __exit__
next(self.gen)
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/alembic/operations/base.py", line 325, in batch_alter_table
impl.flush()
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/alembic/operations/batch.py", line 73, in flush
fn(*arg, **kw)
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/alembic/ddl/mysql.py", line 107, in drop_constraint
super(MySQLImpl, self).drop_constraint(const)
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/alembic/ddl/impl.py", line 240, in drop_constraint
self._exec(schema.DropConstraint(const))
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/alembic/ddl/impl.py", line 134, in _exec
return conn.execute(construct, *multiparams, **params)
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 988, in execute
return meth(self, multiparams, params)
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 72, in _execute_on_connection
return connection._execute_ddl(self, multiparams, params)
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1050, in _execute_ddl
compiled,
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1248, in _execute_context
e, statement, parameters, cursor, context
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1466, in _handle_dbapi_exception
util.raise_from_cause(sqlalchemy_exception, exc_info)
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/sqlalchemy/util/compat.py", line 383, in raise_from_cause
reraise(type(exception), exception, tb=exc_tb, cause=cause)
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/sqlalchemy/util/compat.py", line 128, in reraise
raise value.with_traceback(tb)
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1244, in _execute_context
cursor, statement, parameters, context
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/sqlalchemy/engine/default.py", line 552, in do_execute
cursor.execute(statement, parameters)
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/MySQLdb/cursors.py", line 206, in execute
res = self._query(query)
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/MySQLdb/cursors.py", line 312, in _query
db.query(q)
File "/home/test/work/ccsuperset/venv/lib/python3.6/site-packages/MySQLdb/connections.py", line 224, in query
_mysql.connection.query(self, query)
sqlalchemy.exc.OperationalError: (MySQLdb._exceptions.OperationalError) (1091, "Can't DROP 'user_id'; check that column/key exists")
**[SQL: ALTER TABLE `tables` DROP FOREIGN KEY user_id]**
(Background on this error at: http://sqlalche.me/e/e3q8)
### Expected results
input "superset db upgrade",
then it works successfully.
### Actual results
error comes out : **[SQL: ALTER TABLE `tables` DROP FOREIGN KEY user_id]**
#### Screenshots
If applicable, add screenshots to help explain your problem.
#### How to reproduce the bug
1. use mysql8.x to install '0.29.0rc8'
2.swith branch to '0.31.0rc18' or '0.32.0rc2' or '0.33.0rc1' and install
3.use 'superset db upgrade'
4.error comes out.
### Environment
(please complete the following information):
- superset version: 0.29.0rc8
- python version: 3.6.7
- node.js version: v8.10.0
- npm version: 3.5.2
### Checklist
Make sure these boxes are checked before submitting your issue - thank you!
- [*] I have checked the superset logs for python stacktraces and included it here as text if there are any.
- [*] I have reproduced the issue with at least the latest released version of superset.
- [*] I have checked the issue tracker for the same issue and I haven't found one similar.
### Additional context
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