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Posted to commits@heron.apache.org by ni...@apache.org on 2020/07/14 17:02:46 UTC
[incubator-heron] branch master updated: Updates to Kubernetes
scheduler to fix dockerenv issue (#3550)
This is an automated email from the ASF dual-hosted git repository.
nicknezis pushed a commit to branch master
in repository https://gitbox.apache.org/repos/asf/incubator-heron.git
The following commit(s) were added to refs/heads/master by this push:
new e1dda9a Updates to Kubernetes scheduler to fix dockerenv issue (#3550)
e1dda9a is described below
commit e1dda9acfded22ac1de86d73981118488d7a3b19
Author: Nicholas Nezis <ni...@gmail.com>
AuthorDate: Tue Jul 14 13:02:36 2020 -0400
Updates to Kubernetes scheduler to fix dockerenv issue (#3550)
* Updates to Kubernetes scheduler to create Headless service
* Use FQDN instead of hostname when running in Kubernetes environment
---
WORKSPACE | 5 +-
examples/src/java/BUILD | 2 +-
heron/executor/src/python/heron_executor.py | 7 +-
.../scheduler/kubernetes/KubernetesCompat.java | 79 -
.../scheduler/kubernetes/KubernetesScheduler.java | 2 +-
.../{AppsV1Controller.java => V1Controller.java} | 88 +-
heron/stmgr/src/cpp/manager/ckptmgr-client.cpp | 4 +-
.../cpp/server/stateful-restorer_unittest.cpp | 4 +-
maven_install.json | 5512 ++++++++++----------
9 files changed, 2856 insertions(+), 2847 deletions(-)
diff --git a/WORKSPACE b/WORKSPACE
index 862c40d..2e35479 100644
--- a/WORKSPACE
+++ b/WORKSPACE
@@ -54,7 +54,7 @@ jetty_version = "9.4.6.v20170531"
jersey_version = "2.25.1"
-kubernetes_client_version = "7.0.0"
+kubernetes_client_version = "8.0.0"
load("@rules_jvm_external//:defs.bzl", "maven_install")
load("@rules_jvm_external//:specs.bzl", "maven")
@@ -73,7 +73,7 @@ maven_install(
"org.apache.mesos:mesos:0.22.0",
"com.hashicorp.nomad:nomad-sdk:0.7.0",
"org.apache.hadoop:hadoop-core:0.20.2",
- "org.apache.pulsar:pulsar-client:1.19.0-incubating",
+ "org.apache.pulsar:pulsar-client:jar:shaded:1.19.0-incubating",
"org.apache.kafka:kafka-clients:2.2.0",
"com.google.apis:google-api-services-storage:v1-rev108-" + google_client_version,
"org.apache.reef:reef-runtime-yarn:" + reef_version,
@@ -81,7 +81,6 @@ maven_install(
"org.apache.httpcomponents:httpclient:" + http_client_version,
"org.apache.httpcomponents:httpmime:" + http_client_version,
"com.google.apis:google-api-services-storage:v1-rev108-1.22.0",
- "io.kubernetes:client-java:7.0.0",
"com.microsoft.dhalion:dhalion:0.2.3",
"org.objenesis:objenesis:2.1",
"org.ow2.asm:asm-all:5.1",
diff --git a/examples/src/java/BUILD b/examples/src/java/BUILD
index dc76ece..8d9e823 100644
--- a/examples/src/java/BUILD
+++ b/examples/src/java/BUILD
@@ -29,7 +29,7 @@ java_binary(
"//heron/common/src/java:basics-java",
"//heron/simulator/src/java:simulator-java",
"//third_party/java:kryo",
- "@maven//:org_apache_pulsar_pulsar_client",
+ "@maven//:org_apache_pulsar_pulsar_client_shaded",
],
)
diff --git a/heron/executor/src/python/heron_executor.py b/heron/executor/src/python/heron_executor.py
index cb063aa..68c094d 100755
--- a/heron/executor/src/python/heron_executor.py
+++ b/heron/executor/src/python/heron_executor.py
@@ -140,6 +140,9 @@ def log_pid_for_process(process_name, pid):
def is_docker_environment():
return os.path.isfile('/.dockerenv')
+def is_kubernetes_environment():
+ return 'POD_NAME' in os.environ
+
def stdout_log_fn(cmd):
"""Simple function callback that is used to log the streaming output of a subprocess command
:param cmd: the name of the command which will be added to the log line
@@ -235,7 +238,9 @@ class HeronExecutor:
# Needed for Docker environments since the hostname of a docker container is the container's
# id within docker, rather than the host's hostname. NOTE: this 'HOST' env variable is not
# guaranteed to be set in all Docker executor environments (outside of Marathon)
- if is_docker_environment():
+ if is_kubernetes_environment():
+ self.master_host = socket.getfqdn()
+ elif is_docker_environment():
self.master_host = os.environ.get('HOST') if 'HOST' in os.environ else socket.gethostname()
else:
self.master_host = socket.gethostname()
diff --git a/heron/schedulers/src/java/org/apache/heron/scheduler/kubernetes/KubernetesCompat.java b/heron/schedulers/src/java/org/apache/heron/scheduler/kubernetes/KubernetesCompat.java
deleted file mode 100644
index 9ce5fba..0000000
--- a/heron/schedulers/src/java/org/apache/heron/scheduler/kubernetes/KubernetesCompat.java
+++ /dev/null
@@ -1,79 +0,0 @@
-/**
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements. See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership. The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License. You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied. See the License for the
- * specific language governing permissions and limitations
- * under the License.
- */
-
-package org.apache.heron.scheduler.kubernetes;
-
-import java.io.IOException;
-import java.util.logging.Level;
-import java.util.logging.Logger;
-
-import org.apache.heron.scheduler.TopologyRuntimeManagementException;
-
-import io.kubernetes.client.openapi.ApiClient;
-import io.kubernetes.client.openapi.ApiException;
-import io.kubernetes.client.openapi.Configuration;
-import io.kubernetes.client.openapi.apis.CoreV1Api;
-
-import okhttp3.Response;
-
-public class KubernetesCompat {
-
- private static final Logger LOG = Logger.getLogger(KubernetesCompat.class.getName());
-
- boolean killTopology(String kubernetesUri, String topology, String namespace) {
- CoreV1Api coreClient;
- try {
- final ApiClient apiClient = io.kubernetes.client.util.Config.defaultClient();
- Configuration.setDefaultApiClient(apiClient);
- coreClient = new CoreV1Api(apiClient);
- } catch (IOException e) {
- LOG.log(Level.SEVERE, "Failed to setup Kubernetes client" + e);
- throw new RuntimeException(e);
- }
-
- // old version deployed topologies as naked pods
- try {
- final String labelSelector = KubernetesConstants.LABEL_TOPOLOGY + "=" + topology;
- final Response response =
- coreClient.deleteCollectionNamespacedPodCall(namespace, null, null, null, null, null,
- null, labelSelector, null, null,
- KubernetesConstants.DELETE_OPTIONS_PROPAGATION_POLICY,
- null, null, null, null, null).execute();
-
- if (response.isSuccessful()) {
- LOG.log(Level.INFO, "Pods for the Job [" + topology
- + "] in namespace [" + namespace + "] are deleted.");
- return true;
- } else {
- LOG.log(Level.SEVERE, "Error when deleting the Pods of the job ["
- + topology + "]: in namespace [" + namespace + "]");
- LOG.log(Level.SEVERE, "Error killing topology message: " + response.message());
- KubernetesUtils.logResponseBodyIfPresent(LOG, response);
- throw new TopologyRuntimeManagementException(
- KubernetesUtils.errorMessageFromResponse(response));
- }
- } catch (IOException | ApiException e) {
- LOG.log(Level.SEVERE, "Error killing topology " + e.getMessage());
- if (e instanceof ApiException) {
- LOG.log(Level.SEVERE, "Error details:\n" + ((ApiException) e).getResponseBody());
- }
- return false;
- }
- }
-}
diff --git a/heron/schedulers/src/java/org/apache/heron/scheduler/kubernetes/KubernetesScheduler.java b/heron/schedulers/src/java/org/apache/heron/scheduler/kubernetes/KubernetesScheduler.java
index 71545be..c35c87d 100644
--- a/heron/schedulers/src/java/org/apache/heron/scheduler/kubernetes/KubernetesScheduler.java
+++ b/heron/schedulers/src/java/org/apache/heron/scheduler/kubernetes/KubernetesScheduler.java
@@ -50,7 +50,7 @@ public class KubernetesScheduler implements IScheduler, IScalable {
private UpdateTopologyManager updateTopologyManager;
protected KubernetesController getController() {
- return new AppsV1Controller(configuration, runtimeConfiguration);
+ return new V1Controller(configuration, runtimeConfiguration);
}
@Override
diff --git a/heron/schedulers/src/java/org/apache/heron/scheduler/kubernetes/AppsV1Controller.java b/heron/schedulers/src/java/org/apache/heron/scheduler/kubernetes/V1Controller.java
similarity index 86%
rename from heron/schedulers/src/java/org/apache/heron/scheduler/kubernetes/AppsV1Controller.java
rename to heron/schedulers/src/java/org/apache/heron/scheduler/kubernetes/V1Controller.java
index 8724034..619562f 100644
--- a/heron/schedulers/src/java/org/apache/heron/scheduler/kubernetes/AppsV1Controller.java
+++ b/heron/schedulers/src/java/org/apache/heron/scheduler/kubernetes/V1Controller.java
@@ -48,6 +48,7 @@ import io.kubernetes.client.openapi.ApiClient;
import io.kubernetes.client.openapi.ApiException;
import io.kubernetes.client.openapi.Configuration;
import io.kubernetes.client.openapi.apis.AppsV1Api;
+import io.kubernetes.client.openapi.apis.CoreV1Api;
import io.kubernetes.client.openapi.models.V1Container;
import io.kubernetes.client.openapi.models.V1ContainerPort;
import io.kubernetes.client.openapi.models.V1EnvVar;
@@ -58,6 +59,8 @@ import io.kubernetes.client.openapi.models.V1ObjectMeta;
import io.kubernetes.client.openapi.models.V1PodSpec;
import io.kubernetes.client.openapi.models.V1PodTemplateSpec;
import io.kubernetes.client.openapi.models.V1ResourceRequirements;
+import io.kubernetes.client.openapi.models.V1Service;
+import io.kubernetes.client.openapi.models.V1ServiceSpec;
import io.kubernetes.client.openapi.models.V1StatefulSet;
import io.kubernetes.client.openapi.models.V1StatefulSetSpec;
import io.kubernetes.client.openapi.models.V1Toleration;
@@ -66,21 +69,23 @@ import io.kubernetes.client.openapi.models.V1VolumeMount;
import okhttp3.Response;
-public class AppsV1Controller extends KubernetesController {
+public class V1Controller extends KubernetesController {
private static final Logger LOG =
- Logger.getLogger(AppsV1Controller.class.getName());
+ Logger.getLogger(V1Controller.class.getName());
private static final String ENV_SHARD_ID = "SHARD_ID";
private final AppsV1Api appsClient;
+ private final CoreV1Api coreClient;
- AppsV1Controller(Config configuration, Config runtimeConfiguration) {
+ V1Controller(Config configuration, Config runtimeConfiguration) {
super(configuration, runtimeConfiguration);
try {
final ApiClient apiClient = io.kubernetes.client.util.Config.defaultClient();
Configuration.setDefaultApiClient(apiClient);
appsClient = new AppsV1Api(apiClient);
+ coreClient = new CoreV1Api(apiClient);
} catch (IOException e) {
LOG.log(Level.SEVERE, "Failed to setup Kubernetes client" + e);
throw new RuntimeException(e);
@@ -96,6 +101,16 @@ public class AppsV1Controller extends KubernetesController {
final Resource containerResource = getContainerResource(packingPlan);
+ final V1Service topologyService = createTopologyyService();
+ try {
+ final V1Service response =
+ coreClient.createNamespacedService(getNamespace(), topologyService, null,
+ null, null);
+ } catch (ApiException e) {
+ KubernetesUtils.logExceptionWithDetails(LOG, "Error creating topology service", e);
+ throw new TopologySubmissionException(e.getMessage());
+ }
+
// find the max number of instances in a container so we can open
// enough ports if remote debugging is enabled.
int numberOfInstances = 0;
@@ -118,11 +133,9 @@ public class AppsV1Controller extends KubernetesController {
@Override
boolean killTopology() {
- return
- isStatefulSet()
- ? deleteStatefulSet()
- :
- new KubernetesCompat().killTopology(getKubernetesUri(), getTopologyName(), getNamespace());
+ deleteStatefulSet();
+ deleteService();
+ return true;
}
@Override
@@ -199,6 +212,31 @@ public class AppsV1Controller extends KubernetesController {
null, null, null);
}
+ boolean deleteService() {
+ try {
+ final Response response = coreClient.deleteNamespacedServiceCall(getTopologyName(),
+ getNamespace(), null, null, 0, null,
+ KubernetesConstants.DELETE_OPTIONS_PROPAGATION_POLICY, null, null).execute();
+
+ if (response.isSuccessful()) {
+ LOG.log(Level.INFO, "Headless Service for the Job [" + getTopologyName()
+ + "] in namespace [" + getNamespace() + "] is deleted.");
+ return true;
+ } else {
+ LOG.log(Level.SEVERE, "Error when deleting the Service of the job ["
+ + getTopologyName() + "] in namespace [" + getNamespace() + "]");
+ LOG.log(Level.SEVERE, "Error killing topoogy message:" + response.message());
+ KubernetesUtils.logResponseBodyIfPresent(LOG, response);
+
+ throw new TopologyRuntimeManagementException(
+ KubernetesUtils.errorMessageFromResponse(response));
+ }
+ } catch (IOException | ApiException e) {
+ KubernetesUtils.logExceptionWithDetails(LOG, "Error deleting topology service", e);
+ return false;
+ }
+ }
+
boolean deleteStatefulSet() {
try {
final Response response = appsClient.deleteNamespacedStatefulSetCall(getTopologyName(),
@@ -211,7 +249,7 @@ public class AppsV1Controller extends KubernetesController {
return true;
} else {
LOG.log(Level.SEVERE, "Error when deleting the StatefulSet of the job ["
- + getTopologyName() + "]: in namespace [" + getNamespace() + "]");
+ + getTopologyName() + "] in namespace [" + getNamespace() + "]");
LOG.log(Level.SEVERE, "Error killing topology message: " + response.message());
KubernetesUtils.logResponseBodyIfPresent(LOG, response);
@@ -224,18 +262,6 @@ public class AppsV1Controller extends KubernetesController {
}
}
- boolean isStatefulSet() {
- try {
- final V1StatefulSet response =
- appsClient.readNamespacedStatefulSet(getTopologyName(), getNamespace(),
- null, null, null);
- return response.getKind().equals("StatefulSet");
- } catch (ApiException e) {
- LOG.warning("isStatefulSet check " + e.getMessage());
- }
- return false;
- }
-
protected List<String> getExecutorCommand(String containerId) {
final Map<ExecutorPort, String> ports =
KubernetesConstants.EXECUTOR_PORTS.entrySet()
@@ -262,6 +288,26 @@ public class AppsV1Controller extends KubernetesController {
return String.format("%s=${POD_NAME##*-} && echo shardId=${%s}", ENV_SHARD_ID, ENV_SHARD_ID);
}
+ private V1Service createTopologyyService() {
+ final String topologyName = getTopologyName();
+ final Config runtimeConfiguration = getRuntimeConfiguration();
+
+ final V1Service service = new V1Service();
+
+ // setup service metadata
+ final V1ObjectMeta objectMeta = new V1ObjectMeta();
+ objectMeta.name(topologyName);
+ service.setMetadata(objectMeta);
+
+ // create the headless service
+ final V1ServiceSpec serviceSpec = new V1ServiceSpec();
+ serviceSpec.clusterIP("None");
+ serviceSpec.setSelector(getMatchLabels(topologyName));
+
+ service.setSpec(serviceSpec);
+
+ return service;
+ }
private V1StatefulSet createStatefulSet(Resource containerResource, int numberOfInstances) {
final String topologyName = getTopologyName();
diff --git a/heron/stmgr/src/cpp/manager/ckptmgr-client.cpp b/heron/stmgr/src/cpp/manager/ckptmgr-client.cpp
index 332bc88..61c3e7b 100644
--- a/heron/stmgr/src/cpp/manager/ckptmgr-client.cpp
+++ b/heron/stmgr/src/cpp/manager/ckptmgr-client.cpp
@@ -45,10 +45,10 @@ CkptMgrClient::CkptMgrClient(std::shared_ptr<EventLoop> eventloop, const Network
ckptmgr_id_(_ckptmgr_id),
stmgr_id_(_stmgr_id),
quit_(false),
- pplan_(nullptr),
ckpt_saved_watcher_(_ckpt_saved_watcher),
ckpt_get_watcher_(_ckpt_get_watcher),
- register_watcher_(_register_watcher) {
+ register_watcher_(_register_watcher),
+ pplan_(nullptr) {
// TODO(nlu): take the value from config
reconnect_cpktmgr_interval_sec_ = 10;
diff --git a/heron/stmgr/tests/cpp/server/stateful-restorer_unittest.cpp b/heron/stmgr/tests/cpp/server/stateful-restorer_unittest.cpp
index 69b44d0..783ce06 100644
--- a/heron/stmgr/tests/cpp/server/stateful-restorer_unittest.cpp
+++ b/heron/stmgr/tests/cpp/server/stateful-restorer_unittest.cpp
@@ -346,7 +346,7 @@ TEST(StatefulRestorer, deadinstances) {
// Send notification that some tasks have recovered
EXPECT_GT(local_tasks.size(), 1);
bool first = true;
- int32_t troublesome_task;
+ int32_t troublesome_task = 0;
for (auto task : local_tasks) {
if (first) {
first = false;
@@ -426,7 +426,7 @@ TEST(StatefulRestorer, deadckptmgr) {
// Send notification that some tasks have recovered
EXPECT_GT(local_tasks.size(), 1);
bool first = true;
- int32_t troublesome_task;
+ int32_t troublesome_task = 0;
// ckpt delivers some checkpoints
for (auto task : local_tasks) {
if (first) {
diff --git a/maven_install.json b/maven_install.json
index ce48939..4a8c29f 100644
--- a/maven_install.json
+++ b/maven_install.json
@@ -1,140 +1,132 @@
{
"dependency_tree": {
+ "__AUTOGENERATED_FILE_DO_NOT_MODIFY_THIS_FILE_MANUALLY": 554853469,
"conflict_resolution": {},
"dependencies": [
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"coord": "ant:ant:1.6.5",
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- "directDependencies": [],
"dependencies": [],
- "url": "https://jcenter.bintray.com/ant/ant/1.6.5/ant-1.6.5.jar",
+ "directDependencies": [],
+ "file": "v1/https/jcenter.bintray.com/ant/ant/1.6.5/ant-1.6.5.jar",
"mirror_urls": [
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"https://repo1.maven.org/maven2/ant/ant/1.6.5/ant-1.6.5.jar"
],
- "sha256": "f06a601c718a7c9262d74b7ec3baad14c82584e89235089b4f821d6a44d9e1e4"
+ "sha256": "f06a601c718a7c9262d74b7ec3baad14c82584e89235089b4f821d6a44d9e1e4",
+ "url": "https://jcenter.bintray.com/ant/ant/1.6.5/ant-1.6.5.jar"
},
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"dependencies": [],
- "url": "https://jcenter.bintray.com/ant/ant/1.6.5/ant-1.6.5-sources.jar",
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"https://repo1.maven.org/maven2/ant/ant/1.6.5/ant-1.6.5-sources.jar"
],
- "sha256": "45369155a1ecca333ae193761094cba1fe279bdf537ed70d2bb968b7c7797ce2"
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"https://repo1.maven.org/maven2/antlr/antlr/2.7.7/antlr-2.7.7.jar"
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"dependencies": [],
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"mirror_urls": [
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],
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... 1604 lines suppressed ...