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Posted to notifications@rya.apache.org by DLotts <gi...@git.apache.org> on 2017/11/17 17:31:08 UTC

[GitHub] incubator-rya pull request #249: [WIP] Rya-104 for 2017 mongo admin shell

GitHub user DLotts opened a pull request:

    https://github.com/apache/incubator-rya/pull/249

    [WIP] Rya-104 for 2017 mongo admin shell

    ## Description
    MongoDB in the Rya Admin Shell
    
    ### Tests
    Yes, nice coverage so far.
    
    ### Links
    [Jira](https://issues.apache.org/jira/browse/RYA-104)
    
    ### Checklist
    - [ ] Code Review
    - [ ] Squash Commits
    
    #### People To Reivew
    


You can merge this pull request into a Git repository by running:

    $ git pull https://github.com/DLotts/incubator-rya RYA-104_2017MongoAdminShell

Alternatively you can review and apply these changes as the patch at:

    https://github.com/apache/incubator-rya/pull/249.patch

To close this pull request, make a commit to your master/trunk branch
with (at least) the following in the commit message:

    This closes #249
    
----
commit c33321493cfb87b7e366ba6936379c74d869c535
Author: David Lotts <da...@parsons.com>
Date:   2017-06-14T21:50:11Z

    RYA-324, RYA-272 Geo refactoring and examples closes #182

commit e7f78096dd368a555e4b659507bfc772ff29ce85
Author: David Lotts <da...@parsons.com>
Date:   2017-08-02T21:24:42Z

    Fixed old artifact names from review comments.

commit beaff5dfd71a14346e7b72696180219009e29532
Author: David Lotts <da...@parsons.com>
Date:   2017-08-03T17:11:34Z

    pom Name consistency from review comments.

commit 651767575de77fb1c7ca11237e3b420f9875ccf8
Author: David W. Lotts <da...@parsons.com>
Date:   2017-08-24T21:31:38Z

    jopt-simple added to the pom

commit 1a5642e494bec2d84859824659da4b1565ab0b71
Author: David W. Lotts <da...@parsons.com>
Date:   2017-08-28T18:41:56Z

    Removed dependence on jopt-simple

commit 2bc887b4d18d77452a9dbdd9ca07670f4b54fa06
Author: David W. Lotts <da...@parsons.com>
Date:   2017-08-28T18:47:27Z

    Removed dependence on jopt-simple library.

commit 2093ab38bb871904f09f3186f98a1087b520ff99
Author: David W. Lotts <da...@parsons.com>
Date:   2017-08-28T19:18:35Z

    Add licence banner.

commit e9ba0bc22eef2d063151f49f1367c7d3c423db4d
Author: eric.white <er...@parsons.com>
Date:   2017-08-23T15:08:58Z

    RYA-300 Added owl:oneOf inference. Closes #215

commit 336b4ad3dc36b684ff6f2cf98a5bafbb8da849c7
Author: David W. Lotts <da...@parsons.com>
Date:   2017-08-28T20:16:48Z

    Fixing conflicts

commit c26570b49fae268347de0bcf6eefa1861b61a23a
Author: isper3at <sm...@gmail.com>
Date:   2017-08-22T19:28:18Z

    RYA-332 rename integration tests.  Closes #212.
    
    Some integration tests were being ignored
    since the class names ended with
    "IntegrationTest" instead of "IT"

commit b91003f0ab7712710fdf6ca58f5c89ab31535735
Author: Jesse Hatfield <je...@parsons.com>
Date:   2017-08-24T01:14:48Z

    RYA-294 owl:someValuesFrom inference. Closes #217.

commit 13e2d2d43e4a06e476eed78aef628ead72b8ef31
Author: Caleb Meier <ca...@parsons.com>
Date:   2017-08-08T04:22:00Z

    RYA-246-Query-Export-Strategy. Closes #213.

commit f7771d0f327ab443278e03b63ae673522e2216c6
Author: jdasch <jd...@localhost.localdomain>
Date:   2017-08-23T03:08:30Z

    RYA-350 Added EmbeddedKafkaSingleton to help eliminate flaky ITs. Closes #214.

commit 863767a7898f1f9a7b393ab8c34103356c4c8d63
Author: isper3at <sm...@gmail.com>
Date:   2017-08-08T16:03:57Z

    RYA-296 add HasSelf inference rule.  Closes #209.
    
    Added has self along with tests

commit f921f4476c40d4577ce55cdc263a7bd0e838dc6b
Author: David W. Lotts <da...@parsons.com>
Date:   2017-08-28T20:24:12Z

    Merge branch 'master' of github.com:DLotts/incubator-rya

commit f6696b74dd749256d8127d50e884722a534e4200
Author: isper3at <sm...@gmail.com>
Date:   2016-07-12T16:28:01Z

    RYA-104 rebasing mongo Support in Admin Shell

commit 5337c93ba1a1e0b130261bdd317c87a3fb056276
Author: David W. Lotts <da...@parsons.com>
Date:   2017-11-16T22:14:02Z

    Merge branch 'master' of github.com:apache/incubator-rya into RYA-104_2017MongoAdminShell

commit 42e6fed19fc08664ad787fc422d4f9fe479c911c
Author: David W. Lotts <da...@parsons.com>
Date:   2017-11-16T23:23:50Z

    RYA-104 merge from master

----


---

[GitHub] incubator-rya pull request #249: [WIP] Rya-104 for 2017 mongo admin shell

Posted by kchilton2 <gi...@git.apache.org>.
Github user kchilton2 commented on a diff in the pull request:

    https://github.com/apache/incubator-rya/pull/249#discussion_r157374439
  
    --- Diff: extras/indexing/src/test/java/org/apache/rya/api/client/mongo/MongoLoadStatementsFileIT.java ---
    @@ -18,97 +18,114 @@
      */
     package org.apache.rya.api.client.mongo;
     
    +import static org.junit.Assert.assertEquals;
    +
    +import java.nio.file.Paths;
    +import java.util.ArrayList;
    +import java.util.List;
    +
    +import org.apache.rya.api.client.Install;
    +import org.apache.rya.api.client.Install.InstallConfiguration;
    +import org.apache.rya.api.client.InstanceDoesNotExistException;
    +import org.apache.rya.api.client.RyaClient;
     import org.apache.rya.mongodb.MongoTestBase;
    +import org.bson.Document;
    +import org.junit.Test;
    +import org.openrdf.model.Statement;
    +import org.openrdf.model.ValueFactory;
    +import org.openrdf.model.impl.ValueFactoryImpl;
    +import org.openrdf.rio.RDFFormat;
     
    +import com.mongodb.client.MongoCursor;
     /**
      * Integration tests the methods of {@link MongoLoadStatementsFile}.
      */
     public class MongoLoadStatementsFileIT extends MongoTestBase {
     
    -//    @Test(expected = InstanceDoesNotExistException.class)
    -//    public void instanceDoesNotExist() throws Exception {
    -//
    -//        final RyaClient ryaClient = MongoRyaClientFactory.build(getConnectionDetails(), conf.getMongoClient());
    -//        ryaClient.getLoadStatementsFile().loadStatements(getConnectionDetails().getInstance(), Paths.get("src/test/resources/example.ttl"), RDFFormat.TURTLE);
    -//    }
    -//
    -//    @Test
    -//    public void loadTurtleFile() throws Exception {
    -//        // Install an instance of Rya.
    -//        final InstallConfiguration installConfig = InstallConfiguration.builder()
    -//                .setEnableTableHashPrefix(false)
    -//                .setEnableEntityCentricIndex(false)
    -//                .setEnableFreeTextIndex(false)
    -//                .setEnableTemporalIndex(false)
    -//                .setEnablePcjIndex(false)
    -//                .setEnableGeoIndex(false)
    -//                .build();
    -//        MongoConnectionDetails connectionDetails = getConnectionDetails();
    -//        final RyaClient ryaClient = MongoRyaClientFactory.build(connectionDetails, conf.getMongoClient());
    -//        final Install install = ryaClient.getInstall();
    -//        install.install(connectionDetails.getInstance(), installConfig);
    -//
    -//        // Load the test statement file.
    -//        ryaClient.getLoadStatementsFile().loadStatements( //
    -//                        connectionDetails.getInstance(), //
    -//                        Paths.get("src/test/resources/example.ttl"), //
    -//                        RDFFormat.TURTLE);
    -//
    -//        // Verify that the statements were loaded.
    -//        final ValueFactory vf = new ValueFactoryImpl();
    -//
    -//        final List<Statement> expected = new ArrayList<>();
    -//        expected.add( vf.createStatement(vf.createURI("http://example#alice"), vf.createURI("http://example#talksTo"), vf.createURI("http://example#bob")) );
    -//        expected.add( vf.createStatement(vf.createURI("http://example#bob"), vf.createURI("http://example#talksTo"), vf.createURI("http://example#charlie")) );
    -//        expected.add( vf.createStatement(vf.createURI("http://example#charlie"), vf.createURI("http://example#likes"), vf.createURI("http://example#icecream")) );
    -//
    -//        final List<Statement> statements = new ArrayList<>();
    -//        MongoCursor<Document> x = getRyaCollection().find().iterator();
    -//        System.out.println("getRyaCollection().count()=" + getRyaCollection().count());
    -//        while (x.hasNext()) {
    -//            Document y = x.next();
    -//            System.out.println("getRyaCollection()=" + y);
    -//        }
    -//        assertEquals("Expect all rows to be read.", 3, getRyaCollection().count());
    -//        // final WholeRowTripleResolver tripleResolver = new WholeRowTripleResolver();
    -//        // final Scanner scanner = getConnector().createScanner(getRyaInstanceName() + "spo", new Authorizations());
    -//        // final Iterator<Entry<Key, Value>> it = scanner.iterator();
    -//        // while(it.hasNext()) {
    -//        // final Entry<Key, Value> next = it.next();
    -//        //
    -//        // final Key key = next.getKey();
    -//        // final byte[] row = key.getRow().getBytes();
    -//        // final byte[] columnFamily = key.getColumnFamily().getBytes();
    -//        // final byte[] columnQualifier = key.getColumnQualifier().getBytes();
    -//        // final TripleRow tripleRow = new TripleRow(row, columnFamily, columnQualifier);
    -//        //
    -//        // final RyaStatement ryaStatement = tripleResolver.deserialize(TABLE_LAYOUT.SPO, tripleRow);
    -//        // final Statement statement = RyaToRdfConversions.convertStatement(ryaStatement);
    -//        //
    -//        // // Filter out the rya version statement if it is present.
    -//        // if(!isRyaMetadataStatement(vf, statement)) {
    -//        // statements.add( statement );
    -//        // }
    -//        // }
    -//        //
    -//        // assertEquals(expected, statements);
    -//    }
    -//
    -//    private boolean isRyaMetadataStatement(final ValueFactory vf, final Statement statement) {
    -//        return statement.getPredicate().equals( vf.createURI("urn:org.apache.rya/2012/05#version") ) ||
    -//                statement.getPredicate().equals( vf.createURI("urn:org.apache.rya/2012/05#rts") );
    -//    }
    -//    /**
    -//     * @return copy from conf to MongoConnectionDetails
    -//     */
    -//    private MongoConnectionDetails getConnectionDetails() {
    -//        final MongoConnectionDetails connectionDetails = new MongoConnectionDetails(//
    -//                        conf.getMongoUser(), //
    -//                        conf.getMongoPassword().toCharArray(), //
    -//                        conf.getMongoDBName(), // aka instance
    -//                        conf.getMongoInstance(), // aka hostname
    -//                        conf.getCollectionName()
    -//        );
    -//        return connectionDetails;
    -//    }
    +    @Test(expected = InstanceDoesNotExistException.class)
    +    public void instanceDoesNotExist() throws Exception {
    +
    +        final RyaClient ryaClient = MongoRyaClientFactory.build(getConnectionDetails(), conf.getMongoClient());
    +        ryaClient.getLoadStatementsFile().loadStatements(getConnectionDetails().getHostname(), Paths.get("src/test/resources/example.ttl"), RDFFormat.TURTLE);
    +    }
    +
    +    @Test
    +    public void loadTurtleFile() throws Exception {
    +        // Install an instance of Rya.
    +        final InstallConfiguration installConfig = InstallConfiguration.builder()//
    --- End diff --
    
    Why do you put // on the ends of your lines? That's completely unnecessary.


---

[GitHub] incubator-rya issue #249: [WIP] Rya-104 for 2017 mongo admin shell

Posted by asfgit <gi...@git.apache.org>.
Github user asfgit commented on the issue:

    https://github.com/apache/incubator-rya/pull/249
  
    
    Refer to this link for build results (access rights to CI server needed): 
    https://builds.apache.org/job/incubator-rya-master-with-optionals-pull-requests/569/<h2>Failed Tests: <span class='status-failure'>1</span></h2><h3><a name='incubator-rya-master-with-optionals-pull-requests/org.apache.rya:mongodb.rya' /><a href='https://builds.apache.org/job/incubator-rya-master-with-optionals-pull-requests/569/org.apache.rya$mongodb.rya/testReport'>incubator-rya-master-with-optionals-pull-requests/org.apache.rya:mongodb.rya</a>: <span class='status-failure'>1</span></h3><ul><li><a href='https://builds.apache.org/job/incubator-rya-master-with-optionals-pull-requests/569/org.apache.rya$mongodb.rya/testReport/org.apache.rya.mongodb.instance/MongoDetailsAdapterTest/absentOptionalToRyaDetailsTest/'><strong>org.apache.rya.mongodb.instance.MongoDetailsAdapterTest.absentOptionalToRyaDetailsTest</strong></a></li></ul>



---

[GitHub] incubator-rya issue #249: [WIP] Rya-104 for 2017 mongo admin shell

Posted by asfgit <gi...@git.apache.org>.
Github user asfgit commented on the issue:

    https://github.com/apache/incubator-rya/pull/249
  
    
    Refer to this link for build results (access rights to CI server needed): 
    https://builds.apache.org/job/incubator-rya-master-with-optionals-pull-requests/574/<h2>Failed Tests: <span class='status-failure'>1</span></h2><h3><a name='incubator-rya-master-with-optionals-pull-requests/org.apache.rya:mongodb.rya' /><a href='https://builds.apache.org/job/incubator-rya-master-with-optionals-pull-requests/574/org.apache.rya$mongodb.rya/testReport'>incubator-rya-master-with-optionals-pull-requests/org.apache.rya:mongodb.rya</a>: <span class='status-failure'>1</span></h3><ul><li><a href='https://builds.apache.org/job/incubator-rya-master-with-optionals-pull-requests/574/org.apache.rya$mongodb.rya/testReport/org.apache.rya.mongodb.instance/MongoDetailsAdapterTest/absentOptionalToRyaDetailsTest/'><strong>org.apache.rya.mongodb.instance.MongoDetailsAdapterTest.absentOptionalToRyaDetailsTest</strong></a></li></ul>



---

[GitHub] incubator-rya pull request #249: [WIP] Rya-104 for 2017 mongo admin shell

Posted by DLotts <gi...@git.apache.org>.
Github user DLotts closed the pull request at:

    https://github.com/apache/incubator-rya/pull/249


---

[GitHub] incubator-rya issue #249: [WIP] Rya-104 for 2017 mongo admin shell

Posted by asfgit <gi...@git.apache.org>.
Github user asfgit commented on the issue:

    https://github.com/apache/incubator-rya/pull/249
  
    
    Refer to this link for build results (access rights to CI server needed): 
    https://builds.apache.org/job/incubator-rya-master-with-optionals-pull-requests/577/<h2>Failed Tests: <span class='status-failure'>1</span></h2><h3><a name='incubator-rya-master-with-optionals-pull-requests/org.apache.rya:mongodb.rya' /><a href='https://builds.apache.org/job/incubator-rya-master-with-optionals-pull-requests/577/org.apache.rya$mongodb.rya/testReport'>incubator-rya-master-with-optionals-pull-requests/org.apache.rya:mongodb.rya</a>: <span class='status-failure'>1</span></h3><ul><li><a href='https://builds.apache.org/job/incubator-rya-master-with-optionals-pull-requests/577/org.apache.rya$mongodb.rya/testReport/org.apache.rya.mongodb.instance/MongoDetailsAdapterTest/absentOptionalToRyaDetailsTest/'><strong>org.apache.rya.mongodb.instance.MongoDetailsAdapterTest.absentOptionalToRyaDetailsTest</strong></a></li></ul>



---

[GitHub] incubator-rya issue #249: [WIP] Rya-104 for 2017 mongo admin shell

Posted by asfgit <gi...@git.apache.org>.
Github user asfgit commented on the issue:

    https://github.com/apache/incubator-rya/pull/249
  
    
    Refer to this link for build results (access rights to CI server needed): 
    https://builds.apache.org/job/incubator-rya-master-with-optionals-pull-requests/568/<h2>Build result: FAILURE</span></h2>[...truncated 1.85 MB...][INFO] ------------------------------------------------------------------------[INFO] Total time: 39:23 min[INFO] Finished at: 2017-12-19T21:25:25+00:00[INFO] Final Memory: 197M/2672M[INFO] ------------------------------------------------------------------------[ERROR] Failed to execute goal org.apache.maven.plugins:maven-compiler-plugin:3.2:compile (default-compile) on project rya.shell: Compilation failure[ERROR] /home/jenkins/jenkins-slave/workspace/incubator-rya-master-with-optionals-pull-requests@2/extras/shell/src/main/java/org/apache/rya/shell/RyaConnectionCommands.java:[194,62] constructor MongoConnectionDetails in class org.apache.rya.api.client.mongo.MongoConnectionDetails cannot be applied to given types;[ERROR] required: java.lang.String,char[],java.lang.String,int,java.lang.String[ERROR] found: java.lang.String,char[],java.
 lang.String,int[ERROR] reason: actual and formal argument lists differ in length[ERROR] -> [Help 1][ERROR] [ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.[ERROR] Re-run Maven using the -X switch to enable full debug logging.[ERROR] [ERROR] For more information about the errors and possible solutions, please read the following articles:[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException[ERROR] [ERROR] After correcting the problems, you can resume the build with the command[ERROR]   mvn <goals> -rf :rya.shellchannel stoppedSetting status of a75bc1c6faef3a5425b0552119960191b3762c0d to FAILURE with url https://builds.apache.org/job/incubator-rya-master-with-optionals-pull-requests/568/ and message: 'FAILURE 'Using context: Jenkins: clean package -Pgeoindexing



---

[GitHub] incubator-rya issue #249: [WIP] Rya-104 for 2017 mongo admin shell

Posted by asfgit <gi...@git.apache.org>.
Github user asfgit commented on the issue:

    https://github.com/apache/incubator-rya/pull/249
  
    
    Refer to this link for build results (access rights to CI server needed): 
    https://builds.apache.org/job/incubator-rya-master-with-optionals-pull-requests/554/<h2>Build result: FAILURE</span></h2>[...truncated 2.06 MB...] at [Source: {"url":"https://api.github.com/repos/apache/incubator-rya/statuses/42e6fed19fc08664ad787fc422d4f9fe479c911c","id":4325905151,"state":"failure","description":"FAILURE\n ","target_url":"https://builds.apache.org/job/incubator-rya-master-with-optionals-pull-requests/554/","context":"Jenkins: clean package -Pgeoindexing","created_at":"2017-11-17T21:55:57Z","updated_at":"2017-11-17T21:55:57Z","creator":{"login":"asfgit","id":1341245,"avatar_url":"https://avatars1.githubusercontent.com/u/1341245?v=4","gravatar_id":"","url":"https://api.github.com/users/asfgit","html_url":"https://github.com/asfgit","followers_url":"https://api.github.com/users/asfgit/followers","following_url":"https://api.github.com/users/asfgit/following{/other_user}","gists_url":"https://api.github.com/users/asfgit/gists{/gist_id}","starred_url":"https://api.g
 ithub.com/users/asfgit/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/asfgit/subscriptions","organizations_url":"https://api.github.com/users/asfgit/orgs","repos_url":"https://api.github.com/users/asfgit/repos","events_url":"https://api.github.com/users/asfgit/events{/privacy}","received_events_url":"https://api.github.com/users/asfgit/received_events","type":"User","site_admin":false}}; line: 1, column: 125] at [Source: {"url":"https://api.github.com/repos/apache/incubator-rya/statuses/42e6fed19fc08664ad787fc422d4f9fe479c911c","id":4325905151,"state":"failure","description":"FAILURE\n ","target_url":"https://builds.apache.org/job/incubator-rya-master-with-optionals-pull-requests/554/","context":"Jenkins: clean package -Pgeoindexing","created_at":"2017-11-17T21:55:57Z","updated_at":"2017-11-17T21:55:57Z","creator":{"login":"asfgit","id":1341245,"avatar_url":"https://avatars1.githubusercontent.com/u/1341245?v=4","gravatar_id":"","url":"https://api.github.co
 m/users/asfgit","html_url":"https://github.com/asfgit","followers_url":"https://api.github.com/users/asfgit/followers","following_url":"https://api.github.com/users/asfgit/following{/other_user}","gists_url":"https://api.github.com/users/asfgit/gists{/gist_id}","starred_url":"https://api.github.com/users/asfgit/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/asfgit/subscriptions","organizations_url":"https://api.github.com/users/asfgit/orgs","repos_url":"https://api.github.com/users/asfgit/repos","events_url":"https://api.github.com/users/asfgit/events{/privacy}","received_events_url":"https://api.github.com/users/asfgit/received_events","type":"User","site_admin":false}}; line: 1, column: 115] (through reference chain: org.kohsuke.github.GHCommitStatus["id"])	at com.fasterxml.jackson.databind.JsonMappingException.wrapWithPath(JsonMappingException.java:388)	at com.fasterxml.jackson.databind.JsonMappingException.wrapWithPath(JsonMappingException.java:348)	at
  com.fasterxml.jackson.databind.deser.BeanDeserializerBase.wrapAndThrow(BeanDeserializerBase.java:1607)	at com.fasterxml.jackson.databind.deser.BeanDeserializer.vanillaDeserialize(BeanDeserializer.java:278)	at com.fasterxml.jackson.databind.deser.BeanDeserializer.deserialize(BeanDeserializer.java:140)	at com.fasterxml.jackson.databind.ObjectMapper._readMapAndClose(ObjectMapper.java:3798)	at com.fasterxml.jackson.databind.ObjectMapper.readValue(ObjectMapper.java:2842)	at org.kohsuke.github.Requester.parse(Requester.java:616)	... 13 moreCaused by: com.fasterxml.jackson.core.JsonParseException: Numeric value (4325905151) out of range of int at [Source: {"url":"https://api.github.com/repos/apache/incubator-rya/statuses/42e6fed19fc08664ad787fc422d4f9fe479c911c","id":4325905151,"state":"failure","description":"FAILURE\n ","target_url":"https://builds.apache.org/job/incubator-rya-master-with-optionals-pull-requests/554/","context":"Jenkins: clean package -Pgeoindexing","created_at":"2017-1
 1-17T21:55:57Z","updated_at":"2017-11-17T21:55:57Z","creator":{"login":"asfgit","id":1341245,"avatar_url":"https://avatars1.githubusercontent.com/u/1341245?v=4","gravatar_id":"","url":"https://api.github.com/users/asfgit","html_url":"https://github.com/asfgit","followers_url":"https://api.github.com/users/asfgit/followers","following_url":"https://api.github.com/users/asfgit/following{/other_user}","gists_url":"https://api.github.com/users/asfgit/gists{/gist_id}","starred_url":"https://api.github.com/users/asfgit/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/asfgit/subscriptions","organizations_url":"https://api.github.com/users/asfgit/orgs","repos_url":"https://api.github.com/users/asfgit/repos","events_url":"https://api.github.com/users/asfgit/events{/privacy}","received_events_url":"https://api.github.com/users/asfgit/received_events","type":"User","site_admin":false}}; line: 1, column: 125]	at com.fasterxml.jackson.core.JsonParser._constructError(Json
 Parser.java:1702)	at com.fasterxml.jackson.core.base.ParserMinimalBase._reportError(ParserMinimalBase.java:558)	at com.fasterxml.jackson.core.base.ParserBase.convertNumberToInt(ParserBase.java:928)	at com.fasterxml.jackson.core.base.ParserBase._parseIntValue(ParserBase.java:866)	at com.fasterxml.jackson.core.base.ParserBase.getIntValue(ParserBase.java:694)	at com.fasterxml.jackson.databind.deser.std.NumberDeserializers$IntegerDeserializer.deserialize(NumberDeserializers.java:306)	at com.fasterxml.jackson.databind.deser.std.NumberDeserializers$IntegerDeserializer.deserialize(NumberDeserializers.java:286)	at com.fasterxml.jackson.databind.deser.SettableBeanProperty.deserialize(SettableBeanProperty.java:504)	at com.fasterxml.jackson.databind.deser.impl.FieldProperty.deserializeAndSet(FieldProperty.java:108)	at com.fasterxml.jackson.databind.deser.BeanDeserializer.vanillaDeserialize(BeanDeserializer.java:276)	... 17 more



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[GitHub] incubator-rya issue #249: [WIP] Rya-104 for 2017 mongo admin shell

Posted by asfgit <gi...@git.apache.org>.
Github user asfgit commented on the issue:

    https://github.com/apache/incubator-rya/pull/249
  
    
    Refer to this link for build results (access rights to CI server needed): 
    https://builds.apache.org/job/incubator-rya-master-with-optionals-pull-requests/570/<h2>Failed Tests: <span class='status-failure'>1</span></h2><h3><a name='incubator-rya-master-with-optionals-pull-requests/org.apache.rya:mongodb.rya' /><a href='https://builds.apache.org/job/incubator-rya-master-with-optionals-pull-requests/570/org.apache.rya$mongodb.rya/testReport'>incubator-rya-master-with-optionals-pull-requests/org.apache.rya:mongodb.rya</a>: <span class='status-failure'>1</span></h3><ul><li><a href='https://builds.apache.org/job/incubator-rya-master-with-optionals-pull-requests/570/org.apache.rya$mongodb.rya/testReport/org.apache.rya.mongodb.instance/MongoDetailsAdapterTest/absentOptionalToRyaDetailsTest/'><strong>org.apache.rya.mongodb.instance.MongoDetailsAdapterTest.absentOptionalToRyaDetailsTest</strong></a></li></ul>



---

[GitHub] incubator-rya issue #249: [WIP] Rya-104 for 2017 mongo admin shell

Posted by asfgit <gi...@git.apache.org>.
Github user asfgit commented on the issue:

    https://github.com/apache/incubator-rya/pull/249
  
    
    Refer to this link for build results (access rights to CI server needed): 
    https://builds.apache.org/job/incubator-rya-master-with-optionals-pull-requests/565/<h2>Build result: FAILURE</span></h2>[...truncated 637.58 KB...][INFO] Apache Rya Spark Support ........................... SKIPPED[INFO] Apache Rya Web Projects ............................ SKIPPED[INFO] Apache Rya Web Implementation ...................... SKIPPED[INFO] ------------------------------------------------------------------------[INFO] BUILD FAILURE[INFO] ------------------------------------------------------------------------[INFO] Total time: 13:56 min[INFO] Finished at: 2017-12-15T22:35:35+00:00[INFO] Final Memory: 415M/3064M[INFO] ------------------------------------------------------------------------[ERROR] Failed to execute goal org.apache.rat:apache-rat-plugin:0.11:check (check-licenses) on project rya.indexing: Too many files with unapproved license: 2 See RAT report in: /home/jenkins/jenkins-slave/workspace/incubator-rya-master-with-optionals-pull-requests/extras/indexing/ta
 rget/rat.txt -> [Help 1][ERROR] [ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.[ERROR] Re-run Maven using the -X switch to enable full debug logging.[ERROR] [ERROR] For more information about the errors and possible solutions, please read the following articles:[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException[ERROR] [ERROR] After correcting the problems, you can resume the build with the command[ERROR]   mvn <goals> -rf :rya.indexingchannel stoppedSetting status of 72d90f9a2850fc38f7d0d5dd53edcbadffb3e2e3 to FAILURE with url https://builds.apache.org/job/incubator-rya-master-with-optionals-pull-requests/565/ and message: 'FAILURE 'Using context: Jenkins: clean package -Pgeoindexing



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[GitHub] incubator-rya pull request #249: [WIP] Rya-104 for 2017 mongo admin shell

Posted by DLotts <gi...@git.apache.org>.
GitHub user DLotts reopened a pull request:

    https://github.com/apache/incubator-rya/pull/249

    [WIP] Rya-104 for 2017 mongo admin shell

    ## Description
    MongoDB in the Rya Admin Shell
    
    ### Tests
    Yes, nice coverage so far.
    
    ### Links
    [Jira](https://issues.apache.org/jira/browse/RYA-104)
    
    ### Checklist
    - [ ] Code Review
    - [ ] Squash Commits
    
    #### People To Reivew
    


You can merge this pull request into a Git repository by running:

    $ git pull https://github.com/DLotts/incubator-rya RYA-104_2017MongoAdminShell

Alternatively you can review and apply these changes as the patch at:

    https://github.com/apache/incubator-rya/pull/249.patch

To close this pull request, make a commit to your master/trunk branch
with (at least) the following in the commit message:

    This closes #249
    
----
commit c33321493cfb87b7e366ba6936379c74d869c535
Author: David Lotts <da...@parsons.com>
Date:   2017-06-14T21:50:11Z

    RYA-324, RYA-272 Geo refactoring and examples closes #182

commit e7f78096dd368a555e4b659507bfc772ff29ce85
Author: David Lotts <da...@parsons.com>
Date:   2017-08-02T21:24:42Z

    Fixed old artifact names from review comments.

commit beaff5dfd71a14346e7b72696180219009e29532
Author: David Lotts <da...@parsons.com>
Date:   2017-08-03T17:11:34Z

    pom Name consistency from review comments.

commit 651767575de77fb1c7ca11237e3b420f9875ccf8
Author: David W. Lotts <da...@parsons.com>
Date:   2017-08-24T21:31:38Z

    jopt-simple added to the pom

commit 1a5642e494bec2d84859824659da4b1565ab0b71
Author: David W. Lotts <da...@parsons.com>
Date:   2017-08-28T18:41:56Z

    Removed dependence on jopt-simple

commit 2bc887b4d18d77452a9dbdd9ca07670f4b54fa06
Author: David W. Lotts <da...@parsons.com>
Date:   2017-08-28T18:47:27Z

    Removed dependence on jopt-simple library.

commit 2093ab38bb871904f09f3186f98a1087b520ff99
Author: David W. Lotts <da...@parsons.com>
Date:   2017-08-28T19:18:35Z

    Add licence banner.

commit e9ba0bc22eef2d063151f49f1367c7d3c423db4d
Author: eric.white <er...@parsons.com>
Date:   2017-08-23T15:08:58Z

    RYA-300 Added owl:oneOf inference. Closes #215

commit 336b4ad3dc36b684ff6f2cf98a5bafbb8da849c7
Author: David W. Lotts <da...@parsons.com>
Date:   2017-08-28T20:16:48Z

    Fixing conflicts

commit c26570b49fae268347de0bcf6eefa1861b61a23a
Author: isper3at <sm...@gmail.com>
Date:   2017-08-22T19:28:18Z

    RYA-332 rename integration tests.  Closes #212.
    
    Some integration tests were being ignored
    since the class names ended with
    "IntegrationTest" instead of "IT"

commit b91003f0ab7712710fdf6ca58f5c89ab31535735
Author: Jesse Hatfield <je...@parsons.com>
Date:   2017-08-24T01:14:48Z

    RYA-294 owl:someValuesFrom inference. Closes #217.

commit 13e2d2d43e4a06e476eed78aef628ead72b8ef31
Author: Caleb Meier <ca...@parsons.com>
Date:   2017-08-08T04:22:00Z

    RYA-246-Query-Export-Strategy. Closes #213.

commit f7771d0f327ab443278e03b63ae673522e2216c6
Author: jdasch <jd...@localhost.localdomain>
Date:   2017-08-23T03:08:30Z

    RYA-350 Added EmbeddedKafkaSingleton to help eliminate flaky ITs. Closes #214.

commit 863767a7898f1f9a7b393ab8c34103356c4c8d63
Author: isper3at <sm...@gmail.com>
Date:   2017-08-08T16:03:57Z

    RYA-296 add HasSelf inference rule.  Closes #209.
    
    Added has self along with tests

commit f921f4476c40d4577ce55cdc263a7bd0e838dc6b
Author: David W. Lotts <da...@parsons.com>
Date:   2017-08-28T20:24:12Z

    Merge branch 'master' of github.com:DLotts/incubator-rya

commit f6696b74dd749256d8127d50e884722a534e4200
Author: isper3at <sm...@gmail.com>
Date:   2016-07-12T16:28:01Z

    RYA-104 rebasing mongo Support in Admin Shell

commit 5337c93ba1a1e0b130261bdd317c87a3fb056276
Author: David W. Lotts <da...@parsons.com>
Date:   2017-11-16T22:14:02Z

    Merge branch 'master' of github.com:apache/incubator-rya into RYA-104_2017MongoAdminShell

commit 42e6fed19fc08664ad787fc422d4f9fe479c911c
Author: David W. Lotts <da...@parsons.com>
Date:   2017-11-16T23:23:50Z

    RYA-104 merge from master

----


---

[GitHub] incubator-rya issue #249: [WIP] Rya-104 for 2017 mongo admin shell

Posted by asfgit <gi...@git.apache.org>.
Github user asfgit commented on the issue:

    https://github.com/apache/incubator-rya/pull/249
  
    
    Refer to this link for build results (access rights to CI server needed): 
    https://builds.apache.org/job/incubator-rya-master-with-optionals-pull-requests/573/<h2>Failed Tests: <span class='status-failure'>1</span></h2><h3><a name='incubator-rya-master-with-optionals-pull-requests/org.apache.rya:mongodb.rya' /><a href='https://builds.apache.org/job/incubator-rya-master-with-optionals-pull-requests/573/org.apache.rya$mongodb.rya/testReport'>incubator-rya-master-with-optionals-pull-requests/org.apache.rya:mongodb.rya</a>: <span class='status-failure'>1</span></h3><ul><li><a href='https://builds.apache.org/job/incubator-rya-master-with-optionals-pull-requests/573/org.apache.rya$mongodb.rya/testReport/org.apache.rya.mongodb.instance/MongoDetailsAdapterTest/absentOptionalToRyaDetailsTest/'><strong>org.apache.rya.mongodb.instance.MongoDetailsAdapterTest.absentOptionalToRyaDetailsTest</strong></a></li></ul>



---

[GitHub] incubator-rya issue #249: [WIP] Rya-104 for 2017 mongo admin shell

Posted by asfgit <gi...@git.apache.org>.
Github user asfgit commented on the issue:

    https://github.com/apache/incubator-rya/pull/249
  
    FAILURE
     



---

[GitHub] incubator-rya pull request #249: [WIP] Rya-104 for 2017 mongo admin shell

Posted by DLotts <gi...@git.apache.org>.
Github user DLotts closed the pull request at:

    https://github.com/apache/incubator-rya/pull/249


---

[GitHub] incubator-rya issue #249: [WIP] Rya-104 for 2017 mongo admin shell

Posted by asfgit <gi...@git.apache.org>.
Github user asfgit commented on the issue:

    https://github.com/apache/incubator-rya/pull/249
  
    
    Refer to this link for build results (access rights to CI server needed): 
    https://builds.apache.org/job/incubator-rya-master-with-optionals-pull-requests/567/<h2>Failed Tests: <span class='status-failure'>1</span></h2><h3><a name='incubator-rya-master-with-optionals-pull-requests/org.apache.rya:mongodb.rya' /><a href='https://builds.apache.org/job/incubator-rya-master-with-optionals-pull-requests/567/org.apache.rya$mongodb.rya/testReport'>incubator-rya-master-with-optionals-pull-requests/org.apache.rya:mongodb.rya</a>: <span class='status-failure'>1</span></h3><ul><li><a href='https://builds.apache.org/job/incubator-rya-master-with-optionals-pull-requests/567/org.apache.rya$mongodb.rya/testReport/org.apache.rya.mongodb.instance/MongoDetailsAdapterTest/absentOptionalToRyaDetailsTest/'><strong>org.apache.rya.mongodb.instance.MongoDetailsAdapterTest.absentOptionalToRyaDetailsTest</strong></a></li></ul>



---

[GitHub] incubator-rya issue #249: [WIP] Rya-104 for 2017 mongo admin shell

Posted by asfgit <gi...@git.apache.org>.
Github user asfgit commented on the issue:

    https://github.com/apache/incubator-rya/pull/249
  
    
    Refer to this link for build results (access rights to CI server needed): 
    https://builds.apache.org/job/incubator-rya-master-with-optionals-pull-requests/576/



---

[GitHub] incubator-rya issue #249: [WIP] Rya-104 for 2017 mongo admin shell

Posted by asfgit <gi...@git.apache.org>.
Github user asfgit commented on the issue:

    https://github.com/apache/incubator-rya/pull/249
  
    
    Refer to this link for build results (access rights to CI server needed): 
    https://builds.apache.org/job/incubator-rya-master-with-optionals-pull-requests/564/<h2>Build result: FAILURE</span></h2>[...truncated 381.51 KB...][INFO] Apache Rya Web Projects ............................ SKIPPED[INFO] Apache Rya Web Implementation ...................... SKIPPED[INFO] ------------------------------------------------------------------------[INFO] BUILD FAILURE[INFO] ------------------------------------------------------------------------[INFO] Total time: 05:59 min[INFO] Finished at: 2017-12-14T15:41:42+00:00[INFO] Final Memory: 249M/3139M[INFO] ------------------------------------------------------------------------[ERROR] Failed to execute goal org.apache.rat:apache-rat-plugin:0.11:check (check-licenses) on project rya.indexing: Too many files with unapproved license: 2 See RAT report in: /home/jenkins/jenkins-slave/workspace/incubator-rya-master-with-optionals-pull-requests/extras/indexing/target/rat.txt -> [Help 1][ERROR] [ERROR] To see the full stack trace
  of the errors, re-run Maven with the -e switch.[ERROR] Re-run Maven using the -X switch to enable full debug logging.[ERROR] [ERROR] For more information about the errors and possible solutions, please read the following articles:[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException[ERROR] [ERROR] After correcting the problems, you can resume the build with the command[ERROR]   mvn <goals> -rf :rya.indexingchannel stoppedSetting status of a2be7833f392d840c1c0483d4c4a85588c9129fc to FAILURE with url https://builds.apache.org/job/incubator-rya-master-with-optionals-pull-requests/564/ and message: 'FAILURE 'Using context: Jenkins: clean package -Pgeoindexing



---

[GitHub] incubator-rya issue #249: [WIP] Rya-104 for 2017 mongo admin shell

Posted by asfgit <gi...@git.apache.org>.
Github user asfgit commented on the issue:

    https://github.com/apache/incubator-rya/pull/249
  
    
    Refer to this link for build results (access rights to CI server needed): 
    https://builds.apache.org/job/incubator-rya-master-with-optionals-pull-requests/563/<h2>Build result: FAILURE</span></h2>[...truncated 381.63 KB...][INFO] Apache Rya Spark Support ........................... SKIPPED[INFO] Apache Rya Web Projects ............................ SKIPPED[INFO] Apache Rya Web Implementation ...................... SKIPPED[INFO] ------------------------------------------------------------------------[INFO] BUILD FAILURE[INFO] ------------------------------------------------------------------------[INFO] Total time: 08:38 min[INFO] Finished at: 2017-12-13T22:46:10+00:00[INFO] Final Memory: 146M/3023M[INFO] ------------------------------------------------------------------------[ERROR] Failed to execute goal org.apache.rat:apache-rat-plugin:0.11:check (check-licenses) on project rya.indexing: Too many files with unapproved license: 2 See RAT report in: /home/jenkins/jenkins-slave/workspace/incubator-rya-master-with-optionals-pull-requests/extras/indexing/ta
 rget/rat.txt -> [Help 1][ERROR] [ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.[ERROR] Re-run Maven using the -X switch to enable full debug logging.[ERROR] [ERROR] For more information about the errors and possible solutions, please read the following articles:[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException[ERROR] [ERROR] After correcting the problems, you can resume the build with the command[ERROR]   mvn <goals> -rf :rya.indexingchannel stoppedSetting status of 3be4c181f7f8ca39f687a046a40d64abc1dd6751 to FAILURE with url https://builds.apache.org/job/incubator-rya-master-with-optionals-pull-requests/563/ and message: 'FAILURE 'Using context: Jenkins: clean package -Pgeoindexing



---