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Posted to users@airavata.apache.org by Heejoon Chae <he...@cs.indiana.edu> on 2013/12/17 12:37:01 UTC
JNLP XBaya launching with workflow, registration server.
Hi, all,
I have question about XBaya JNLP launching. Is there way to load
workflow(.xwf) when the JNLP starts?
Also same question related with registry. Is there way that I can set it up
within JNLP?
Thank you very much!
Heejoon.
Re: JNLP XBaya launching with workflow, registration server.
Posted by Chathura Herath <ch...@cs.indiana.edu>.
In general if your functionality is not supported, you are encouraged
to create a jira.
On Sat, Dec 21, 2013 at 1:24 AM, Heejoon Chae <he...@cs.indiana.edu> wrote:
> Hi, Chathura,
>
> Then I am not able to create workflow on the fly right before the JNLP is
> invoked and launch together(unless there is way to register workflow on the
> fly) . Am I correct?
>
> Do you think it oaky to create JIRA for this functionality(improving
> 'Xbaya.java -workflow' option to accept URL as well) request?
>
> Thank you!
> Heejoon.
>
>
>
> On Sat, Dec 21, 2013 at 2:57 PM, Chathura Herath <ch...@cs.indiana.edu>
> wrote:
>>
>> Heejoon,
>>
>> I think way its intended now is to save to workflow in the registry
>> and use the name you registered with -workflow option.
>> Have a look at
>>
>> http://svn.apache.org/viewvc/incubator/airavata/trunk/modules/xbaya-gui/src/main/java/org/apache/airavata/xbaya/XBaya.java?revision=1329726&view=markup&pathrev=1329726
>>
>>
>> On Wed, Dec 18, 2013 at 7:52 PM, Heejoon Chae <he...@cs.indiana.edu>
>> wrote:
>> > Hi Chathura,
>> >
>> > Thank you for the answer.
>> >
>> > I found from the Xbaya.java, that there is '-workflow' option as below.
>> > [heechae@biobrainpool bin]$ sh xbaya-gui.sh -help
>> > Usage: java org.apache.airavata.xbaya.XBaya [-help][-config file]
>> > [-title
>> > title] [-workflow workflow] ...
>> >
>> > I have tried several ways (with url/local xwf) but I got only following
>> > error. Could you check it on?
>> > I could manually open the workflow, so the 'xwf' file is not the problem
>> > I
>> > guess.
>> >
>> > [heechae@biobrainpool bin]$ sh xbaya-gui.sh -workflow test.xwf
>> > SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder".
>> > SLF4J: Defaulting to no-operation (NOP) logger implementation
>> > SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for
>> > further
>> > details.
>> > org.apache.airavata.workflow.model.exceptions.WorkflowRuntimeException:
>> > java.lang.reflect.InvocationTargetException
>> > at org.apache.airavata.xbaya.ui.XBayaGUI.<init>(XBayaGUI.java:178)
>> > at org.apache.airavata.xbaya.XBayaEngine.<init>(XBayaEngine.java:114)
>> > at org.apache.airavata.xbaya.XBaya.<init>(XBaya.java:51)
>> > at org.apache.airavata.xbaya.XBaya.main(XBaya.java:312)
>> > Caused by: java.lang.reflect.InvocationTargetException
>> > at java.awt.EventQueue.invokeAndWait(EventQueue.java:1269)
>> > at java.awt.EventQueue.invokeAndWait(EventQueue.java:1244)
>> > at javax.swing.SwingUtilities.invokeAndWait(SwingUtilities.java:1349)
>> > at org.apache.airavata.xbaya.ui.XBayaGUI.<init>(XBayaGUI.java:154)
>> > ... 3 more
>> > Caused by: java.lang.NullPointerException
>> > at
>> > org.apache.airavata.xbaya.ui.XBayaGUI.loadDefaultGraph(XBayaGUI.java:832)
>> > at org.apache.airavata.xbaya.ui.XBayaGUI.init(XBayaGUI.java:556)
>> > at org.apache.airavata.xbaya.ui.XBayaGUI.access$000(XBayaGUI.java:92)
>> > at org.apache.airavata.xbaya.ui.XBayaGUI$1.run(XBayaGUI.java:156)
>> > at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:241)
>> > at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:727)
>> > at java.awt.EventQueue.access$200(EventQueue.java:103)
>> > at java.awt.EventQueue$3.run(EventQueue.java:688)
>> > at java.awt.EventQueue$3.run(EventQueue.java:686)
>> > at java.security.AccessController.doPrivileged(Native Method)
>> > at
>> >
>> > java.security.ProtectionDomain$1.doIntersectionPrivilege(ProtectionDomain.java:76)
>> > at java.awt.EventQueue.dispatchEvent(EventQueue.java:697)
>> > at
>> >
>> > java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:242)
>> > at
>> >
>> > java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:161)
>> > at
>> >
>> > java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:150)
>> > at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:146)
>> > at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:138)
>> > at java.awt.EventDispatchThread.run(EventDispatchThread.java:91)
>> >
>> > Thank you!
>> > Heejoon.
>> >
>> >
>> > On Thu, Dec 19, 2013 at 1:18 AM, Chathura Herath
>> > <ch...@cs.indiana.edu>
>> > wrote:
>> >>
>> >> Place your xwf in a web accessible location (or in registry). Have
>> >> look at the XBaya.java for which java argument need to be passed in.
>> >> It should be -url if i am not mistaken. Encode this in your jnlp and
>> >> you should be good to go.
>> >>
>> >> On Tue, Dec 17, 2013 at 6:37 AM, Heejoon Chae <he...@cs.indiana.edu>
>> >> wrote:
>> >> > Hi, all,
>> >> >
>> >> > I have question about XBaya JNLP launching. Is there way to load
>> >> > workflow(.xwf) when the JNLP starts?
>> >> >
>> >> > Also same question related with registry. Is there way that I can set
>> >> > it
>> >> > up
>> >> > within JNLP?
>> >> >
>> >> > Thank you very much!
>> >> > Heejoon.
>> >>
>> >>
>> >>
>> >> --
>> >> Chathura Herath Ph.D
>> >> http://people.apache.org/~chathura/
>> >> http://chathurah.blogspot.com/
>> >
>> >
>>
>>
>>
>> --
>> Chathura Herath Ph.D
>> http://people.apache.org/~chathura/
>> http://chathurah.blogspot.com/
>
>
--
Chathura Herath Ph.D
http://people.apache.org/~chathura/
http://chathurah.blogspot.com/
Re: JNLP XBaya launching with workflow, registration server.
Posted by Heejoon Chae <he...@cs.indiana.edu>.
Hi, Chathura,
Then I am not able to create workflow on the fly right before the JNLP is
invoked and launch together(unless there is way to register workflow on the
fly) . Am I correct?
Do you think it oaky to create JIRA for this functionality(improving
'Xbaya.java -workflow' option to accept URL as well) request?
Thank you!
Heejoon.
On Sat, Dec 21, 2013 at 2:57 PM, Chathura Herath <ch...@cs.indiana.edu>wrote:
> Heejoon,
>
> I think way its intended now is to save to workflow in the registry
> and use the name you registered with -workflow option.
> Have a look at
>
> http://svn.apache.org/viewvc/incubator/airavata/trunk/modules/xbaya-gui/src/main/java/org/apache/airavata/xbaya/XBaya.java?revision=1329726&view=markup&pathrev=1329726
>
>
> On Wed, Dec 18, 2013 at 7:52 PM, Heejoon Chae <he...@cs.indiana.edu>
> wrote:
> > Hi Chathura,
> >
> > Thank you for the answer.
> >
> > I found from the Xbaya.java, that there is '-workflow' option as below.
> > [heechae@biobrainpool bin]$ sh xbaya-gui.sh -help
> > Usage: java org.apache.airavata.xbaya.XBaya [-help][-config file] [-title
> > title] [-workflow workflow] ...
> >
> > I have tried several ways (with url/local xwf) but I got only following
> > error. Could you check it on?
> > I could manually open the workflow, so the 'xwf' file is not the problem
> I
> > guess.
> >
> > [heechae@biobrainpool bin]$ sh xbaya-gui.sh -workflow test.xwf
> > SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder".
> > SLF4J: Defaulting to no-operation (NOP) logger implementation
> > SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for
> further
> > details.
> > org.apache.airavata.workflow.model.exceptions.WorkflowRuntimeException:
> > java.lang.reflect.InvocationTargetException
> > at org.apache.airavata.xbaya.ui.XBayaGUI.<init>(XBayaGUI.java:178)
> > at org.apache.airavata.xbaya.XBayaEngine.<init>(XBayaEngine.java:114)
> > at org.apache.airavata.xbaya.XBaya.<init>(XBaya.java:51)
> > at org.apache.airavata.xbaya.XBaya.main(XBaya.java:312)
> > Caused by: java.lang.reflect.InvocationTargetException
> > at java.awt.EventQueue.invokeAndWait(EventQueue.java:1269)
> > at java.awt.EventQueue.invokeAndWait(EventQueue.java:1244)
> > at javax.swing.SwingUtilities.invokeAndWait(SwingUtilities.java:1349)
> > at org.apache.airavata.xbaya.ui.XBayaGUI.<init>(XBayaGUI.java:154)
> > ... 3 more
> > Caused by: java.lang.NullPointerException
> > at
> org.apache.airavata.xbaya.ui.XBayaGUI.loadDefaultGraph(XBayaGUI.java:832)
> > at org.apache.airavata.xbaya.ui.XBayaGUI.init(XBayaGUI.java:556)
> > at org.apache.airavata.xbaya.ui.XBayaGUI.access$000(XBayaGUI.java:92)
> > at org.apache.airavata.xbaya.ui.XBayaGUI$1.run(XBayaGUI.java:156)
> > at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:241)
> > at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:727)
> > at java.awt.EventQueue.access$200(EventQueue.java:103)
> > at java.awt.EventQueue$3.run(EventQueue.java:688)
> > at java.awt.EventQueue$3.run(EventQueue.java:686)
> > at java.security.AccessController.doPrivileged(Native Method)
> > at
> >
> java.security.ProtectionDomain$1.doIntersectionPrivilege(ProtectionDomain.java:76)
> > at java.awt.EventQueue.dispatchEvent(EventQueue.java:697)
> > at
> >
> java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:242)
> > at
> >
> java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:161)
> > at
> >
> java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:150)
> > at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:146)
> > at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:138)
> > at java.awt.EventDispatchThread.run(EventDispatchThread.java:91)
> >
> > Thank you!
> > Heejoon.
> >
> >
> > On Thu, Dec 19, 2013 at 1:18 AM, Chathura Herath <cherath@cs.indiana.edu
> >
> > wrote:
> >>
> >> Place your xwf in a web accessible location (or in registry). Have
> >> look at the XBaya.java for which java argument need to be passed in.
> >> It should be -url if i am not mistaken. Encode this in your jnlp and
> >> you should be good to go.
> >>
> >> On Tue, Dec 17, 2013 at 6:37 AM, Heejoon Chae <he...@cs.indiana.edu>
> >> wrote:
> >> > Hi, all,
> >> >
> >> > I have question about XBaya JNLP launching. Is there way to load
> >> > workflow(.xwf) when the JNLP starts?
> >> >
> >> > Also same question related with registry. Is there way that I can set
> it
> >> > up
> >> > within JNLP?
> >> >
> >> > Thank you very much!
> >> > Heejoon.
> >>
> >>
> >>
> >> --
> >> Chathura Herath Ph.D
> >> http://people.apache.org/~chathura/
> >> http://chathurah.blogspot.com/
> >
> >
>
>
>
> --
> Chathura Herath Ph.D
> http://people.apache.org/~chathura/
> http://chathurah.blogspot.com/
>
Re: JNLP XBaya launching with workflow, registration server.
Posted by Chathura Herath <ch...@cs.indiana.edu>.
Heejoon,
I think way its intended now is to save to workflow in the registry
and use the name you registered with -workflow option.
Have a look at
http://svn.apache.org/viewvc/incubator/airavata/trunk/modules/xbaya-gui/src/main/java/org/apache/airavata/xbaya/XBaya.java?revision=1329726&view=markup&pathrev=1329726
On Wed, Dec 18, 2013 at 7:52 PM, Heejoon Chae <he...@cs.indiana.edu> wrote:
> Hi Chathura,
>
> Thank you for the answer.
>
> I found from the Xbaya.java, that there is '-workflow' option as below.
> [heechae@biobrainpool bin]$ sh xbaya-gui.sh -help
> Usage: java org.apache.airavata.xbaya.XBaya [-help][-config file] [-title
> title] [-workflow workflow] ...
>
> I have tried several ways (with url/local xwf) but I got only following
> error. Could you check it on?
> I could manually open the workflow, so the 'xwf' file is not the problem I
> guess.
>
> [heechae@biobrainpool bin]$ sh xbaya-gui.sh -workflow test.xwf
> SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder".
> SLF4J: Defaulting to no-operation (NOP) logger implementation
> SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for further
> details.
> org.apache.airavata.workflow.model.exceptions.WorkflowRuntimeException:
> java.lang.reflect.InvocationTargetException
> at org.apache.airavata.xbaya.ui.XBayaGUI.<init>(XBayaGUI.java:178)
> at org.apache.airavata.xbaya.XBayaEngine.<init>(XBayaEngine.java:114)
> at org.apache.airavata.xbaya.XBaya.<init>(XBaya.java:51)
> at org.apache.airavata.xbaya.XBaya.main(XBaya.java:312)
> Caused by: java.lang.reflect.InvocationTargetException
> at java.awt.EventQueue.invokeAndWait(EventQueue.java:1269)
> at java.awt.EventQueue.invokeAndWait(EventQueue.java:1244)
> at javax.swing.SwingUtilities.invokeAndWait(SwingUtilities.java:1349)
> at org.apache.airavata.xbaya.ui.XBayaGUI.<init>(XBayaGUI.java:154)
> ... 3 more
> Caused by: java.lang.NullPointerException
> at org.apache.airavata.xbaya.ui.XBayaGUI.loadDefaultGraph(XBayaGUI.java:832)
> at org.apache.airavata.xbaya.ui.XBayaGUI.init(XBayaGUI.java:556)
> at org.apache.airavata.xbaya.ui.XBayaGUI.access$000(XBayaGUI.java:92)
> at org.apache.airavata.xbaya.ui.XBayaGUI$1.run(XBayaGUI.java:156)
> at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:241)
> at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:727)
> at java.awt.EventQueue.access$200(EventQueue.java:103)
> at java.awt.EventQueue$3.run(EventQueue.java:688)
> at java.awt.EventQueue$3.run(EventQueue.java:686)
> at java.security.AccessController.doPrivileged(Native Method)
> at
> java.security.ProtectionDomain$1.doIntersectionPrivilege(ProtectionDomain.java:76)
> at java.awt.EventQueue.dispatchEvent(EventQueue.java:697)
> at
> java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:242)
> at
> java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:161)
> at
> java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:150)
> at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:146)
> at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:138)
> at java.awt.EventDispatchThread.run(EventDispatchThread.java:91)
>
> Thank you!
> Heejoon.
>
>
> On Thu, Dec 19, 2013 at 1:18 AM, Chathura Herath <ch...@cs.indiana.edu>
> wrote:
>>
>> Place your xwf in a web accessible location (or in registry). Have
>> look at the XBaya.java for which java argument need to be passed in.
>> It should be -url if i am not mistaken. Encode this in your jnlp and
>> you should be good to go.
>>
>> On Tue, Dec 17, 2013 at 6:37 AM, Heejoon Chae <he...@cs.indiana.edu>
>> wrote:
>> > Hi, all,
>> >
>> > I have question about XBaya JNLP launching. Is there way to load
>> > workflow(.xwf) when the JNLP starts?
>> >
>> > Also same question related with registry. Is there way that I can set it
>> > up
>> > within JNLP?
>> >
>> > Thank you very much!
>> > Heejoon.
>>
>>
>>
>> --
>> Chathura Herath Ph.D
>> http://people.apache.org/~chathura/
>> http://chathurah.blogspot.com/
>
>
--
Chathura Herath Ph.D
http://people.apache.org/~chathura/
http://chathurah.blogspot.com/
Re: JNLP XBaya launching with workflow, registration server.
Posted by Heejoon Chae <he...@cs.indiana.edu>.
Hi Chathura,
Thank you for the answer.
I found from the Xbaya.java, that there is '-workflow' option as below.
[heechae@biobrainpool bin]$ sh xbaya-gui.sh -help
Usage: java org.apache.airavata.xbaya.XBaya [-help][-config file] [-title
title] [-workflow workflow] ...
I have tried several ways (with url/local xwf) but I got only following
error. Could you check it on?
I could manually open the workflow, so the 'xwf' file is not the problem I
guess.
[heechae@biobrainpool bin]$ sh xbaya-gui.sh -workflow test.xwf
SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder".
SLF4J: Defaulting to no-operation (NOP) logger implementation
SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for further
details.
org.apache.airavata.workflow.model.exceptions.WorkflowRuntimeException:
java.lang.reflect.InvocationTargetException
at org.apache.airavata.xbaya.ui.XBayaGUI.<init>(XBayaGUI.java:178)
at org.apache.airavata.xbaya.XBayaEngine.<init>(XBayaEngine.java:114)
at org.apache.airavata.xbaya.XBaya.<init>(XBaya.java:51)
at org.apache.airavata.xbaya.XBaya.main(XBaya.java:312)
Caused by: java.lang.reflect.InvocationTargetException
at java.awt.EventQueue.invokeAndWait(EventQueue.java:1269)
at java.awt.EventQueue.invokeAndWait(EventQueue.java:1244)
at javax.swing.SwingUtilities.invokeAndWait(SwingUtilities.java:1349)
at org.apache.airavata.xbaya.ui.XBayaGUI.<init>(XBayaGUI.java:154)
... 3 more
Caused by: java.lang.NullPointerException
at org.apache.airavata.xbaya.ui.XBayaGUI.loadDefaultGraph(XBayaGUI.java:832)
at org.apache.airavata.xbaya.ui.XBayaGUI.init(XBayaGUI.java:556)
at org.apache.airavata.xbaya.ui.XBayaGUI.access$000(XBayaGUI.java:92)
at org.apache.airavata.xbaya.ui.XBayaGUI$1.run(XBayaGUI.java:156)
at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:241)
at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:727)
at java.awt.EventQueue.access$200(EventQueue.java:103)
at java.awt.EventQueue$3.run(EventQueue.java:688)
at java.awt.EventQueue$3.run(EventQueue.java:686)
at java.security.AccessController.doPrivileged(Native Method)
at
java.security.ProtectionDomain$1.doIntersectionPrivilege(ProtectionDomain.java:76)
at java.awt.EventQueue.dispatchEvent(EventQueue.java:697)
at
java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:242)
at
java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:161)
at
java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:150)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:146)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:138)
at java.awt.EventDispatchThread.run(EventDispatchThread.java:91)
Thank you!
Heejoon.
On Thu, Dec 19, 2013 at 1:18 AM, Chathura Herath <ch...@cs.indiana.edu>wrote:
> Place your xwf in a web accessible location (or in registry). Have
> look at the XBaya.java for which java argument need to be passed in.
> It should be -url if i am not mistaken. Encode this in your jnlp and
> you should be good to go.
>
> On Tue, Dec 17, 2013 at 6:37 AM, Heejoon Chae <he...@cs.indiana.edu>
> wrote:
> > Hi, all,
> >
> > I have question about XBaya JNLP launching. Is there way to load
> > workflow(.xwf) when the JNLP starts?
> >
> > Also same question related with registry. Is there way that I can set it
> up
> > within JNLP?
> >
> > Thank you very much!
> > Heejoon.
>
>
>
> --
> Chathura Herath Ph.D
> http://people.apache.org/~chathura/
> http://chathurah.blogspot.com/
>
Re: JNLP XBaya launching with workflow, registration server.
Posted by Chathura Herath <ch...@cs.indiana.edu>.
Place your xwf in a web accessible location (or in registry). Have
look at the XBaya.java for which java argument need to be passed in.
It should be -url if i am not mistaken. Encode this in your jnlp and
you should be good to go.
On Tue, Dec 17, 2013 at 6:37 AM, Heejoon Chae <he...@cs.indiana.edu> wrote:
> Hi, all,
>
> I have question about XBaya JNLP launching. Is there way to load
> workflow(.xwf) when the JNLP starts?
>
> Also same question related with registry. Is there way that I can set it up
> within JNLP?
>
> Thank you very much!
> Heejoon.
--
Chathura Herath Ph.D
http://people.apache.org/~chathura/
http://chathurah.blogspot.com/