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Posted to commits@cassandra.apache.org by "Terje Marthinussen (JIRA)" <ji...@apache.org> on 2011/06/16 06:52:47 UTC
[jira] [Reopened] (CASSANDRA-2779) files not cleaned up by GC?
[ https://issues.apache.org/jira/browse/CASSANDRA-2779?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
Terje Marthinussen reopened CASSANDRA-2779:
-------------------------------------------
Reopening until a decision is made to fix either documentation or disk usage,
Things like:
http://wiki.apache.org/cassandra/CassandraHardware
As covered in MemtableSSTable, compactions can require up to 100% of your in-use space temporarily in the worst case
should not exist, and in addition to an up to 100% increase of data from streaming, you need 100% for compaction and headroom to avoid full GC from running every few minutes like occured in this Jira (basically an unusable service)
> files not cleaned up by GC?
> ---------------------------
>
> Key: CASSANDRA-2779
> URL: https://issues.apache.org/jira/browse/CASSANDRA-2779
> Project: Cassandra
> Issue Type: Bug
> Reporter: Terje Marthinussen
>
> This is 0.8.0 + a few 0.8.1 patches on repair.
> We tested repair on 2 nodes in the cluster last night.
> Interestingly enough, I don't believe the node described here is in any way neighbour of the nodes we tested repair on so I am not sure why it is streaming data both in and out, but in any case, it has joined the streaming party.
> We now see:
> ERROR [CompactionExecutor:5] 2011-06-16 09:12:23,928 CompactionManager.java (line 510) insufficient space to compact even the two smallest files, aborting
> INFO [CompactionExecutor:5] 2011-06-16 09:12:23,929 StorageService.java (line 2071) requesting GC to free disk space
> And we see a lot of them:
> INFO [CompactionExecutor:5] 2011-06-16 09:11:59,164 StorageService.java (line 2071) requesting GC to free disk space
> INFO [CompactionExecutor:5] 2011-06-16 09:12:23,929 StorageService.java (line 2071) requesting GC to free disk space
> INFO [CompactionExecutor:5] 2011-06-16 09:12:46,489 StorageService.java (line 2071) requesting GC to free disk space
> INFO [CompactionExecutor:3] 2011-06-16 09:17:53,299 StorageService.java (line 2071) requesting GC to free disk space
> INFO [CompactionExecutor:3] 2011-06-16 09:18:17,782 StorageService.java (line 2071) requesting GC to free disk space
> INFO [CompactionExecutor:3] 2011-06-16 09:18:42,078 StorageService.java (line 2071) requesting GC to free disk space
> INFO [CompactionExecutor:3] 2011-06-16 09:19:06,984 StorageService.java (line 2071) requesting GC to free disk space
> INFO [CompactionExecutor:3] 2011-06-16 09:19:32,079 StorageService.java (line 2071) requesting GC to free disk space
> INFO [CompactionExecutor:3] 2011-06-16 09:19:57,265 StorageService.java (line 2071) requesting GC to free disk space
> INFO [CompactionExecutor:3] 2011-06-16 09:20:22,706 StorageService.java (line 2071) requesting GC to free disk space
> INFO [CompactionExecutor:3] 2011-06-16 09:20:47,331 StorageService.java (line 2071) requesting GC to free disk space
> INFO [CompactionExecutor:3] 2011-06-16 09:21:13,062 StorageService.java (line 2071) requesting GC to free disk space
> INFO [CompactionExecutor:3] 2011-06-16 09:21:38,288 StorageService.java (line 2071) requesting GC to free disk space
> INFO [CompactionExecutor:3] 2011-06-16 09:22:03,500 StorageService.java (line 2071) requesting GC to free disk space
> INFO [CompactionExecutor:3] 2011-06-16 09:22:29,407 StorageService.java (line 2071) requesting GC to free disk space
> INFO [CompactionExecutor:3] 2011-06-16 09:22:55,577 StorageService.java (line 2071) requesting GC to free disk space
> INFO [CompactionExecutor:3] 2011-06-16 09:23:20,951 StorageService.java (line 2071) requesting GC to free disk space
> INFO [CompactionExecutor:3] 2011-06-16 09:23:46,448 StorageService.java (line 2071) requesting GC to free disk space
> INFO [CompactionExecutor:3] 2011-06-16 09:24:12,030 StorageService.java (line 2071) requesting GC to free disk space
> INFO [CompactionExecutor:6] 2011-06-16 09:48:00,633 StorageService.java (line 2071) requesting GC to free disk space
> INFO [CompactionExecutor:6] 2011-06-16 09:48:26,119 StorageService.java (line 2071) requesting GC to free disk space
> INFO [CompactionExecutor:6] 2011-06-16 09:48:49,002 StorageService.java (line 2071) requesting GC to free disk space
> INFO [CompactionExecutor:6] 2011-06-16 10:10:20,196 StorageService.java (line 2071) requesting GC to free disk space
> INFO [CompactionExecutor:6] 2011-06-16 10:10:45,322 StorageService.java (line 2071) requesting GC to free disk space
> INFO [CompactionExecutor:6] 2011-06-16 10:11:07,619 StorageService.java (line 2071) requesting GC to free disk space
> INFO [CompactionExecutor:7] 2011-06-16 11:01:45,562 StorageService.java (line 2071) requesting GC to free disk space
> INFO [CompactionExecutor:7] 2011-06-16 11:02:10,236 StorageService.java (line 2071) requesting GC to free disk space
> INFO [CompactionExecutor:7] 2011-06-16 11:05:31,297 StorageService.java (line 2071) requesting GC to free disk space
> Available disk is 105GB and it is trying to compact a set of the largest sstables. There is probably easily enough disk to do so, but the estimation is not sufficient (lots of dupes here after streaming I think, probably heavily affected by CASSANDRA-2698).
> It is trying to compact 2 sstables of 58 and 41GB.
> If I look at the data dir, I see 46 *Compacted files which makes up an additional 137GB of space.
> The oldest of these Compacted files dates back to Jun 16th 01:26, so 10 hours old.
> It does however succeed at cleaning up some files. There are definitely files which do get deleted. Just that there is a lot which is not.
> Either the GC cleanup tactic is seriously flawed or we have a potential bug keeping references to sstable objects?
> At least one of the sstables not cleaned up dates back before the repair was started, but most of them is from afterwards.
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