You are viewing a plain text version of this content. The canonical link for it is here.
Posted to commits@taverna.apache.org by st...@apache.org on 2015/02/17 21:45:57 UTC

[26/51] [partial] incubator-taverna-workbench git commit: temporarily empty repository

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-graph-model/src/test/java/net/sf/taverna/t2/workbench/models/graph/GraphElementTest.java
----------------------------------------------------------------------
diff --git a/taverna-workbench-graph-model/src/test/java/net/sf/taverna/t2/workbench/models/graph/GraphElementTest.java b/taverna-workbench-graph-model/src/test/java/net/sf/taverna/t2/workbench/models/graph/GraphElementTest.java
deleted file mode 100644
index 8d6b7f8..0000000
--- a/taverna-workbench-graph-model/src/test/java/net/sf/taverna/t2/workbench/models/graph/GraphElementTest.java
+++ /dev/null
@@ -1,148 +0,0 @@
-/*******************************************************************************
- * Copyright (C) 2007 The University of Manchester
- *
- *  Modifications to the initial code base are copyright of their
- *  respective authors, or their employers as appropriate.
- *
- *  This program is free software; you can redistribute it and/or
- *  modify it under the terms of the GNU Lesser General Public License
- *  as published by the Free Software Foundation; either version 2.1 of
- *  the License, or (at your option) any later version.
- *
- *  This program is distributed in the hope that it will be useful, but
- *  WITHOUT ANY WARRANTY; without even the implied warranty of
- *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
- *  Lesser General Public License for more details.
- *
- *  You should have received a copy of the GNU Lesser General Public
- *  License along with this program; if not, write to the Free Software
- *  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
- ******************************************************************************/
-package net.sf.taverna.t2.workbench.models.graph;
-
-
-import static org.junit.Assert.assertEquals;
-import static org.junit.Assert.assertNull;
-
-import java.awt.Color;
-
-import net.sf.taverna.t2.workbench.models.graph.GraphElement.LineStyle;
-
-import org.junit.Before;
-import org.junit.Test;
-
-public class GraphElementTest {
-
-	private GraphElement element;
-
-	private String id;
-
-	private String label;
-
-	private LineStyle lineStyle;
-
-	private Color color;
-
-	private Color fillColor;
-
-	private GraphElement parent;
-
-	private GraphController graphController;
-
-	@Before
-	public void setUp() throws Exception {
-		element = new GraphElement(graphController) {};
-		id = "element-id";
-		label = "element-label";
-		lineStyle = LineStyle.NONE;
-		color = Color.BLUE;
-		fillColor = Color.GREEN;
-		parent = new GraphNode(graphController);
-		element.setId(id);
-		element.setLabel(label);
-		element.setLineStyle(lineStyle);
-		element.setColor(color);
-		element.setFillColor(fillColor);
-		element.setParent(parent);
-	}
-
-	@Test
-	public void testGetParent() {
-		assertEquals(parent, element.getParent());
-	}
-
-	@Test
-	public void testSetParent() {
-		GraphNode newParent = new GraphNode(graphController);
-		element.setParent(newParent);
-		assertEquals(newParent, element.getParent());
-		element.setParent(null);
-		assertNull(element.getParent());
-	}
-
-	@Test
-	public void testGetLabel() {
-		assertEquals(label, element.getLabel());
-	}
-
-	@Test
-	public void testSetLabel() {
-		element.setLabel("new-label");
-		assertEquals("new-label", element.getLabel());
-		element.setLabel(null);
-		assertNull(element.getLabel());
-	}
-
-	@Test
-	public void testGetId() {
-		assertEquals(id, element.getId());
-	}
-
-	@Test
-	public void testSetId() {
-		element.setId("new-id");
-		assertEquals("new-id", element.getId());
-		element.setId(null);
-		assertNull(element.getId());
-	}
-
-	@Test
-	public void testGetColor() {
-		assertEquals(color, element.getColor());
-	}
-
-	@Test
-	public void testSetColor() {
-		element.setColor(Color.RED);
-		assertEquals(Color.RED, element.getColor());
-		element.setColor(null);
-		assertNull(element.getColor());
-	}
-
-	@Test
-	public void testGetFillColor() {
-		assertEquals(fillColor, element.getFillColor());
-	}
-
-	@Test
-	public void testSetFillColor() {
-		element.setFillColor(Color.RED);
-		assertEquals(Color.RED, element.getFillColor());
-		element.setFillColor(null);
-		assertNull(element.getFillColor());
-	}
-
-	@Test
-	public void testGetLineStyle() {
-		assertEquals(lineStyle, element.getLineStyle());
-	}
-
-	@Test
-	public void testSetLineStyle() {
-		element.setLineStyle(LineStyle.DOTTED);
-		assertEquals(LineStyle.DOTTED, element.getLineStyle());
-		element.setLineStyle(null);
-		assertNull(element.getLineStyle());
-	}
-
-}

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-graph-model/src/test/java/net/sf/taverna/t2/workbench/models/graph/GraphNodeTest.java
----------------------------------------------------------------------
diff --git a/taverna-workbench-graph-model/src/test/java/net/sf/taverna/t2/workbench/models/graph/GraphNodeTest.java b/taverna-workbench-graph-model/src/test/java/net/sf/taverna/t2/workbench/models/graph/GraphNodeTest.java
deleted file mode 100644
index c5bcd6c..0000000
--- a/taverna-workbench-graph-model/src/test/java/net/sf/taverna/t2/workbench/models/graph/GraphNodeTest.java
+++ /dev/null
@@ -1,179 +0,0 @@
-/*******************************************************************************
- * Copyright (C) 2007 The University of Manchester
- *
- *  Modifications to the initial code base are copyright of their
- *  respective authors, or their employers as appropriate.
- *
- *  This program is free software; you can redistribute it and/or
- *  modify it under the terms of the GNU Lesser General Public License
- *  as published by the Free Software Foundation; either version 2.1 of
- *  the License, or (at your option) any later version.
- *
- *  This program is distributed in the hope that it will be useful, but
- *  WITHOUT ANY WARRANTY; without even the implied warranty of
- *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
- *  Lesser General Public License for more details.
- *
- *  You should have received a copy of the GNU Lesser General Public
- *  License along with this program; if not, write to the Free Software
- *  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
- ******************************************************************************/
-package net.sf.taverna.t2.workbench.models.graph;
-
-import static org.junit.Assert.assertEquals;
-import static org.junit.Assert.assertFalse;
-import static org.junit.Assert.assertNotNull;
-import static org.junit.Assert.assertNull;
-import static org.junit.Assert.assertTrue;
-
-import java.awt.Dimension;
-
-import net.sf.taverna.t2.workbench.models.graph.GraphShapeElement.Shape;
-
-import org.junit.Before;
-import org.junit.Test;
-
-public class GraphNodeTest {
-
-	private GraphNode node;
-
-	private Shape shape;
-
-	private Dimension size;
-
-	private Graph graph;
-
-	private boolean expanded;
-
-	private GraphController graphController;
-
-	@Before
-	public void setUp() throws Exception {
-		shape = Shape.HOUSE;
-		size = new Dimension(1, 2);
-		graph = new Graph(graphController);
-		expanded = false;
-		node = new GraphNode(graphController);
-		node.setShape(shape);
-		node.setSize(size);
-		node.setGraph(graph);
-		node.setExpanded(expanded);
-	}
-
-	@Test
-	public void testNode() {
-		assertNotNull(new GraphNode(graphController));
-	}
-
-	@Test
-	public void testAddSinkNode() {
-		GraphNode newNode = new GraphNode(graphController);
-		node.addSinkNode(newNode);
-		assertEquals(1, node.getSinkNodes().size());
-		assertTrue(node.getSinkNodes().contains(newNode));
-		assertEquals(node, newNode.getParent());
-	}
-
-	@Test
-	public void testAddSourceNode() {
-		GraphNode newNode = new GraphNode(graphController);
-		node.addSourceNode(newNode);
-		assertEquals(1, node.getSourceNodes().size());
-		assertTrue(node.getSourceNodes().contains(newNode));
-		assertEquals(node, newNode.getParent());
-	}
-
-	@Test
-	public void testGetGraph() {
-		assertEquals(graph, node.getGraph());
-	}
-
-	@Test
-	public void testGetHeight() {
-		assertEquals(size.height, node.getHeight(), 0);
-	}
-
-	@Test
-	public void testGetShape() {
-		assertEquals(shape, node.getShape());
-	}
-
-	@Test
-	public void testGetSinkNodes() {
-		assertNotNull(node.getSinkNodes());
-		assertEquals(0, node.getSinkNodes().size());
-	}
-
-	@Test
-	public void testGetSize() {
-		assertEquals(size, node.getSize());
-	}
-
-	@Test
-	public void testGetSourceNodes() {
-		assertNotNull(node.getSourceNodes());
-		assertEquals(0, node.getSourceNodes().size());
-	}
-
-	@Test
-	public void testGetWidth() {
-		assertEquals(size.width, node.getWidth(), 0);
-	}
-
-	@Test
-	public void testIsExpanded() {
-		assertEquals(expanded, node.isExpanded());
-	}
-
-	@Test
-	public void testRemoveSinkNode() {
-		GraphNode newNode = new GraphNode(graphController);
-		assertFalse(node.removeSinkNode(newNode));
-		node.addSinkNode(newNode);
-		assertTrue(node.removeSinkNode(newNode));
-		assertFalse(node.getSinkNodes().contains(newNode));
-	}
-
-	@Test
-	public void testRemoveSourceNode() {
-		GraphNode newNode = new GraphNode(graphController);
-		assertFalse(node.removeSourceNode(newNode));
-		node.addSourceNode(newNode);
-		assertTrue(node.removeSourceNode(newNode));
-		assertFalse(node.getSourceNodes().contains(newNode));
-	}
-
-	@Test
-	public void testSetExpanded() {
-		node.setExpanded(true);
-		assertEquals(true, node.isExpanded());
-		node.setExpanded(false);
-		assertEquals(false, node.isExpanded());
-	}
-
-	@Test
-	public void testSetGraph() {
-		Graph newGraph = new Graph(graphController);
-		node.setGraph(newGraph);
-		assertEquals(newGraph, node.getGraph());
-		node.setGraph(null);
-		assertNull(node.getGraph());
-	}
-
-	@Test
-	public void testSetShape() {
-		node.setShape(Shape.INVTRIANGLE);
-		assertEquals(Shape.INVTRIANGLE, node.getShape());
-		node.setShape(Shape.TRIANGLE);
-		assertEquals(Shape.TRIANGLE, node.getShape());
-	}
-
-	@Test
-	public void testSetSize() {
-		node.setSize(new Dimension(23, 6));
-		assertEquals(new Dimension(23, 6), node.getSize());
-		node.setSize(new Dimension(14, 4));
-		assertEquals(new Dimension(14, 4), node.getSize());
-	}
-
-}

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-graph-model/src/test/java/net/sf/taverna/t2/workbench/models/graph/GraphTest.java
----------------------------------------------------------------------
diff --git a/taverna-workbench-graph-model/src/test/java/net/sf/taverna/t2/workbench/models/graph/GraphTest.java b/taverna-workbench-graph-model/src/test/java/net/sf/taverna/t2/workbench/models/graph/GraphTest.java
deleted file mode 100644
index 44a5aaf..0000000
--- a/taverna-workbench-graph-model/src/test/java/net/sf/taverna/t2/workbench/models/graph/GraphTest.java
+++ /dev/null
@@ -1,138 +0,0 @@
-/*******************************************************************************
- * Copyright (C) 2007 The University of Manchester
- *
- *  Modifications to the initial code base are copyright of their
- *  respective authors, or their employers as appropriate.
- *
- *  This program is free software; you can redistribute it and/or
- *  modify it under the terms of the GNU Lesser General Public License
- *  as published by the Free Software Foundation; either version 2.1 of
- *  the License, or (at your option) any later version.
- *
- *  This program is distributed in the hope that it will be useful, but
- *  WITHOUT ANY WARRANTY; without even the implied warranty of
- *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
- *  Lesser General Public License for more details.
- *
- *  You should have received a copy of the GNU Lesser General Public
- *  License along with this program; if not, write to the Free Software
- *  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
- ******************************************************************************/
-package net.sf.taverna.t2.workbench.models.graph;
-
-import static org.junit.Assert.assertEquals;
-import static org.junit.Assert.assertFalse;
-import static org.junit.Assert.assertNotNull;
-import static org.junit.Assert.assertTrue;
-import net.sf.taverna.t2.workbench.models.graph.GraphEdge;
-import net.sf.taverna.t2.workbench.models.graph.Graph;
-import net.sf.taverna.t2.workbench.models.graph.GraphNode;
-import net.sf.taverna.t2.workbench.models.graph.Graph.Alignment;
-
-import org.junit.Before;
-import org.junit.Test;
-
-public class GraphTest {
-
-	private Graph graph;
-
-	private Alignment alignment;
-
-	private GraphController graphController;
-
-	@Before
-	public void setUp() throws Exception {
-		alignment = Alignment.VERTICAL;
-		graph = new Graph(graphController);
-	}
-
-	@Test
-	public void testGraph() {
-		assertNotNull(new Graph(graphController));
-	}
-
-	@Test
-	public void testAddEdge() {
-		GraphEdge newEdge = new GraphEdge(graphController);
-		graph.addEdge(newEdge);
-		assertEquals(1, graph.getEdges().size());
-		assertTrue(graph.getEdges().contains(newEdge));
-	}
-
-	@Test
-	public void testAddNode() {
-		GraphNode newNode = new GraphNode(graphController);
-		graph.addNode(newNode);
-		assertEquals(1, graph.getNodes().size());
-		assertTrue(graph.getNodes().contains(newNode));
-		assertEquals(graph, newNode.getParent());
-	}
-
-	@Test
-	public void testAddSubgraph() {
-		Graph newGraph = new Graph(graphController);
-		graph.addSubgraph(newGraph);
-		assertEquals(1, graph.getSubgraphs().size());
-		assertTrue(graph.getSubgraphs().contains(newGraph));
-		assertEquals(graph, newGraph.getParent());
-	}
-
-	@Test
-	public void testGetAlignment() {
-		assertEquals(alignment, graph.getAlignment());
-	}
-
-	@Test
-	public void testGetEdges() {
-		assertNotNull(graph.getNodes());
-		assertEquals(0, graph.getNodes().size());
-	}
-
-	@Test
-	public void testGetNodes() {
-		assertNotNull(graph.getEdges());
-		assertEquals(0, graph.getEdges().size());
-	}
-
-	@Test
-	public void testGetSubgraphs() {
-		assertNotNull(graph.getSubgraphs());
-		assertEquals(0, graph.getSubgraphs().size());
-	}
-
-	@Test
-	public void testRemoveEdge() {
-		GraphEdge newEdge = new GraphEdge(graphController);
-		assertFalse(graph.removeEdge(newEdge));
-		graph.addEdge(newEdge);
-		assertTrue(graph.removeEdge(newEdge));
-		assertFalse(graph.getNodes().contains(newEdge));
-	}
-
-	@Test
-	public void testRemoveNode() {
-		GraphNode newNode = new GraphNode(graphController);
-		assertFalse(graph.removeNode(newNode));
-		graph.addNode(newNode);
-		assertTrue(graph.removeNode(newNode));
-		assertFalse(graph.getNodes().contains(newNode));
-	}
-
-	@Test
-	public void testRemoveSubgraph() {
-		Graph newGraph = new Graph(graphController);
-		assertFalse(graph.removeSubgraph(newGraph));
-		graph.addSubgraph(newGraph);
-		assertTrue(graph.removeSubgraph(newGraph));
-		assertFalse(graph.getSubgraphs().contains(newGraph));
-	}
-
-	@Test
-	public void testSetAlignment() {
-		graph.setAlignment(Alignment.VERTICAL);
-		assertEquals(Alignment.VERTICAL, graph.getAlignment());
-		graph.setAlignment(Alignment.HORIZONTAL);
-		assertEquals(Alignment.HORIZONTAL, graph.getAlignment());
-	}
-
-}

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-graph-model/src/test/resources/nested_iteration.xml
----------------------------------------------------------------------
diff --git a/taverna-workbench-graph-model/src/test/resources/nested_iteration.xml b/taverna-workbench-graph-model/src/test/resources/nested_iteration.xml
deleted file mode 100644
index 3675361..0000000
--- a/taverna-workbench-graph-model/src/test/resources/nested_iteration.xml
+++ /dev/null
@@ -1,121 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<s:scufl xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha" version="0.2" log="0">
-  <s:workflowdescription lsid="urn:lsid:net.sf.taverna:wfDefinition:c7016fc0-c2f4-4171-b6f1-430f408f4822" author="" title="nested_iteration" />
-  <s:processor name="constant" boring="true">
-    <s:stringconstant>constant</s:stringconstant>
-  </s:processor>
-  <s:processor name="generate_list">
-    <s:defaults>
-      <s:default name="prefix">prefix</s:default>
-    </s:defaults>
-    <s:beanshell>
-      <s:scriptvalue>list = new ArrayList();
-for (int i = 0; i &lt; 20; i++) {
- list.add(prefix + i);
-}</s:scriptvalue>
-      <s:beanshellinputlist>
-        <s:beanshellinput s:syntactictype="'text/plain'">prefix</s:beanshellinput>
-      </s:beanshellinputlist>
-      <s:beanshelloutputlist>
-        <s:beanshelloutput s:syntactictype="l('text/plain')">list</s:beanshelloutput>
-      </s:beanshelloutputlist>
-      <s:dependencies s:classloader="iteration" />
-    </s:beanshell>
-  </s:processor>
-  <s:processor name="merge">
-    <s:workflow>
-      <s:scufl version="0.2" log="0">
-        <s:workflowdescription lsid="urn:lsid:net.sf.taverna:wfDefinition:3368fb8d-ecc7-4fcd-b511-6ace84b13c81" author="" title="Untitled workflow #24" />
-        <s:processor name="Nested_Workflow">
-          <s:workflow>
-            <s:scufl version="0.2" log="0">
-              <s:workflowdescription lsid="urn:lsid:net.sf.taverna:wfDefinition:75b99c76-7a76-4d3c-8d39-8c48df3355ad" author="" title="Untitled workflow #36" />
-              <s:processor name="concat">
-                <s:beanshell>
-                  <s:scriptvalue>Thread.sleep(200);
-out = in1 + in2;</s:scriptvalue>
-                  <s:beanshellinputlist>
-                    <s:beanshellinput s:syntactictype="'text/plain'">in1</s:beanshellinput>
-                    <s:beanshellinput s:syntactictype="'text/plain'">in2</s:beanshellinput>
-                  </s:beanshellinputlist>
-                  <s:beanshelloutputlist>
-                    <s:beanshelloutput s:syntactictype="'text/plain'">out</s:beanshelloutput>
-                  </s:beanshelloutputlist>
-                  <s:dependencies s:classloader="iteration" />
-                </s:beanshell>
-              </s:processor>
-              <s:link source="in1" sink="concat:in1" />
-              <s:link source="in2" sink="concat:in2" />
-              <s:link source="concat:out" sink="out" />
-              <s:source name="in1" />
-              <s:source name="in2" />
-              <s:sink name="out" />
-            </s:scufl>
-          </s:workflow>
-        </s:processor>
-        <s:link source="in1" sink="Nested_Workflow:in1" />
-        <s:link source="in2" sink="Nested_Workflow:in2" />
-        <s:link source="Nested_Workflow:out" sink="out" />
-        <s:source name="in1" />
-        <s:source name="in2" />
-        <s:sink name="out" />
-      </s:scufl>
-    </s:workflow>
-    <s:mergemode input="in2" mode="merge" />
-  </s:processor>
-  <s:link source="constant:value" sink="constant" />
-  <s:link source="constant:value" sink="merge:in1" />
-  <s:link source="generate_list:list" sink="list" />
-  <s:link source="generate_list:list" sink="merge:in2" />
-  <s:link source="generate_list:list" sink="merge:in2" />
-  <s:link source="merge:out" sink="concat" />
-  <s:source name="input" />
-  <s:sink name="concat">
-    <s:metadata>
-      <s:mimeTypes>
-        <s:mimeType>'text/plain'</s:mimeType>
-      </s:mimeTypes>
-    </s:metadata>
-  </s:sink>
-  <s:sink name="list">
-    <s:metadata>
-      <s:mimeTypes>
-        <s:mimeType>l('text/plain')</s:mimeType>
-      </s:mimeTypes>
-    </s:metadata>
-  </s:sink>
-  <s:sink name="constant">
-    <s:metadata>
-      <s:mimeTypes>
-        <s:mimeType>'text/plain'</s:mimeType>
-      </s:mimeTypes>
-    </s:metadata>
-  </s:sink>
-  <s:coordination name="constant_BLOCKON_generate_list">
-    <s:condition>
-      <s:state>Completed</s:state>
-      <s:target>generate_list</s:target>
-    </s:condition>
-    <s:action>
-      <s:target>constant</s:target>
-      <s:statechange>
-        <s:from>Scheduled</s:from>
-        <s:to>Running</s:to>
-      </s:statechange>
-    </s:action>
-  </s:coordination>
-  <s:coordination name="merge_BLOCKON_generate_list">
-    <s:condition>
-      <s:state>Completed</s:state>
-      <s:target>generate_list</s:target>
-    </s:condition>
-    <s:action>
-      <s:target>merge</s:target>
-      <s:statechange>
-        <s:from>Scheduled</s:from>
-        <s:to>Running</s:to>
-      </s:statechange>
-    </s:action>
-  </s:coordination>
-</s:scufl>
-

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-graph-view/pom.xml
----------------------------------------------------------------------
diff --git a/taverna-workbench-graph-view/pom.xml b/taverna-workbench-graph-view/pom.xml
deleted file mode 100644
index df8cdc9..0000000
--- a/taverna-workbench-graph-view/pom.xml
+++ /dev/null
@@ -1,88 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
-	<modelVersion>4.0.0</modelVersion>
-	<parent>
-		<groupId>net.sf.taverna.t2</groupId>
-		<artifactId>ui-components</artifactId>
-		<version>2.0-SNAPSHOT</version>
-	</parent>
-	<groupId>net.sf.taverna.t2.ui-components</groupId>
-	<artifactId>graph-view</artifactId>
-	<packaging>bundle</packaging>
-	<name>Graph View</name>
-	<dependencies>
-		<dependency>
-			<groupId>net.sf.taverna.t2.ui-api</groupId>
-			<artifactId>workbench-api</artifactId>
-			<version>${t2.ui.api.version}</version>
-		</dependency>
-		<dependency>
-			<groupId>net.sf.taverna.t2.ui-api</groupId>
-			<artifactId>configuration-api</artifactId>
-			<version>${t2.ui.api.version}</version>
-		</dependency>
-		<dependency>
-			<groupId>net.sf.taverna.t2.ui-api</groupId>
-			<artifactId>file-api</artifactId>
-			<version>${t2.ui.api.version}</version>
-		</dependency>
-		<dependency>
-			<groupId>net.sf.taverna.t2.ui-api</groupId>
-			<artifactId>menu-api</artifactId>
-			<version>${t2.ui.api.version}</version>
-		</dependency>
-		<dependency>
-			<groupId>net.sf.taverna.t2.ui-components</groupId>
-			<artifactId>design-ui</artifactId>
-			<version>${t2.ui.components.version}</version>
-		</dependency>
-		<dependency>
-			<groupId>net.sf.taverna.t2.ui-components</groupId>
-			<artifactId>workflow-view</artifactId>
-			<version>${project.version}</version>
-		</dependency>
-		<dependency>
-			<groupId>net.sf.taverna.t2.ui-components</groupId>
-			<artifactId>graph-model</artifactId>
-			<version>${project.version}</version>
-		</dependency>
-		<dependency>
-			<groupId>net.sf.taverna.t2.lang</groupId>
-			<artifactId>observer</artifactId>
-			<version>${t2.lang.version}</version>
-		</dependency>
-		<dependency>
-			<groupId>net.sf.taverna.t2.lang</groupId>
-			<artifactId>ui</artifactId>
-			<version>${t2.lang.version}</version>
-		</dependency>
-		<dependency>
-			<groupId>net.sf.taverna.t2.lang</groupId>
-			<artifactId>io</artifactId>
-			<version>${t2.lang.version}</version>
-		</dependency>
-		<dependency>
-			<groupId>uk.org.taverna.commons</groupId>
-			<artifactId>taverna-services-api</artifactId>
-		</dependency>
-		<dependency>
-			<groupId>uk.org.taverna.scufl2</groupId>
-			<artifactId>scufl2-api</artifactId>
-		</dependency>
-
-		<dependency>
-			<groupId>org.apache.batik</groupId>
-			<artifactId>batik-osgi</artifactId>
-		</dependency>
-		<dependency>
-			<groupId>log4j</groupId>
-			<artifactId>log4j</artifactId>
-		</dependency>
-
-		<dependency>
-			<groupId>junit</groupId>
-			<artifactId>junit</artifactId>
-			<scope>test</scope>
-		</dependency>
-	</dependencies>
-</project>

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-graph-view/src/main/java/net/sf/taverna/t2/workbench/views/graph/AutoScrollInteractor.java
----------------------------------------------------------------------
diff --git a/taverna-workbench-graph-view/src/main/java/net/sf/taverna/t2/workbench/views/graph/AutoScrollInteractor.java b/taverna-workbench-graph-view/src/main/java/net/sf/taverna/t2/workbench/views/graph/AutoScrollInteractor.java
deleted file mode 100644
index 65a4aa5..0000000
--- a/taverna-workbench-graph-view/src/main/java/net/sf/taverna/t2/workbench/views/graph/AutoScrollInteractor.java
+++ /dev/null
@@ -1,181 +0,0 @@
-package net.sf.taverna.t2.workbench.views.graph;
-
-import static java.awt.event.InputEvent.BUTTON1_DOWN_MASK;
-import static java.awt.event.InputEvent.BUTTON1_MASK;
-import static java.awt.event.MouseEvent.BUTTON1;
-import static java.awt.event.MouseEvent.MOUSE_DRAGGED;
-import static java.awt.event.MouseEvent.MOUSE_PRESSED;
-import static java.lang.System.currentTimeMillis;
-
-import java.awt.Component;
-import java.awt.Dimension;
-import java.awt.event.InputEvent;
-import java.awt.event.MouseEvent;
-import java.awt.geom.AffineTransform;
-import java.util.Timer;
-import java.util.TimerTask;
-
-import org.apache.batik.swing.JSVGCanvas;
-import org.apache.batik.swing.gvt.InteractorAdapter;
-import org.apache.batik.swing.gvt.JGVTComponent;
-
-/**
- * An interactor that scrolls the canvas view if the mouse is dragged to the
- * edge of the canvas.
- * 
- * @author David Withers
- */
-public class AutoScrollInteractor extends InteractorAdapter {
-	/**
-	 * Defines the border around the canvas in which the auto scroll will become
-	 * active.
-	 */
-	private static final int BORDER = 25;
-	/**
-	 * The interval, in milliseconds, between scroll events.
-	 */
-	private static final long SCROLL_INTERVAL = 100;
-
-	private JSVGCanvas svgCanvas;
-	private Dimension canvasSize;
-	private int scrollX;
-	private int scrollY;
-	private int mouseX;
-	private int mouseY;
-
-	/**
-	 * Component used to identify mouse events generated by this class
-	 */
-	private Component eventIdentifier = new Component() {
-		private static final long serialVersionUID = -295542754718804222L;
-	};
-
-	private static Timer timer = new Timer("GraphAutoScrollTimer", true);
-
-	private TimerTask task;
-
-	/**
-	 * Whether the interactor has finished.
-	 */
-	protected boolean finished = true;
-
-	public AutoScrollInteractor(JSVGCanvas svgCanvas) {
-		this.svgCanvas = svgCanvas;
-	}
-
-	@Override
-	public boolean startInteraction(InputEvent ie) {
-		int mods = ie.getModifiers();
-		if (ie.getID() == MOUSE_PRESSED && (mods & BUTTON1_MASK) != 0) {
-			AffineTransform transform = svgCanvas.getRenderingTransform();
-			// check if we're zoomed in
-			if (transform.getScaleX() > 1d || transform.getScaleY() > 1d) {
-				canvasSize = svgCanvas.getSize();
-				return true;
-			}
-		}
-		return false;
-	}
-
-	@Override
-	public boolean endInteraction() {
-		return finished;
-	}
-
-	@Override
-	public void mousePressed(final MouseEvent e) {
-		if (startInteraction(e)) {
-			finished = false;
-			task = new TimerTask() {
-				@Override
-				public void run() {
-					scrollTimerCallback(e);
-				}
-			};
-			timer.schedule(task, 0, SCROLL_INTERVAL);
-		}
-	}
-
-	/**
-	 * Dispatches a mouse drag event that updates the mouse location by the
-	 * amount that the canvas has been scrolled.
-	 * 
-	 * @param dragX
-	 * @param dragY
-	 */
-	private void dispatchDragEvent(double dragX, double dragY) {
-		int x = (int) (mouseX + dragX);
-		int y = (int) (mouseY + dragY);
-		MouseEvent mouseDragEvent = new MouseEvent(eventIdentifier,
-				MOUSE_DRAGGED, currentTimeMillis(), BUTTON1_DOWN_MASK, x, y, 1,
-				false, BUTTON1);
-		svgCanvas.dispatchEvent(mouseDragEvent);
-	}
-
-	@Override
-	public void mouseReleased(MouseEvent e) {
-		if (!finished) {
-			finished = true;
-			scrollX = 0;
-			scrollY = 0;
-			if (task != null)
-				task.cancel();
-		}
-	}
-
-	@Override
-	public void mouseDragged(MouseEvent e) {
-		// ignore events generated by this class
-		if (!finished && e.getSource() != eventIdentifier) {
-			mouseX = e.getX();
-			mouseY = e.getY();
-			int minX = BORDER;
-			int maxX = canvasSize.width - BORDER;
-			int minY = BORDER;
-			int maxY = canvasSize.height - BORDER;
-
-			scrollX = (mouseX < minX) ? (minX - mouseX)
-					: (mouseX > maxX) ? (maxX - mouseX) : 0;
-			scrollY = (mouseY < minY) ? (minY - mouseY)
-					: (mouseY > maxY) ? (maxY - mouseY) : 0;
-		}
-	}
-
-	private void scrollTimerCallback(MouseEvent e) {
-		double x = scrollX;
-		double y = scrollY;
-		if (x == 0 && y == 0)
-			return;
-
-		JGVTComponent c = (JGVTComponent) e.getSource();
-		AffineTransform rt = (AffineTransform) c.getRenderingTransform()
-				.clone();
-		double currentTranslateX = rt.getTranslateX();
-		double currentTranslateY = rt.getTranslateY();
-		// the tranlation that will show the east edge
-		double maxTranslateX = -((canvasSize.width * rt.getScaleX()) - canvasSize.width);
-		// the translation that will show the south
-		double maxTranslateY = -((canvasSize.height * rt.getScaleY()) - canvasSize.height);
-
-		if (x > 0 && currentTranslateX + x > 0)
-			// scroll left && not at west edge
-			x = -currentTranslateX;
-		else if (x < 0 && currentTranslateX + x < maxTranslateX)
-			// scroll right && not at east edge
-			x = maxTranslateX - currentTranslateX;
-
-		if (y > 0 && currentTranslateY + y > 0)
-			// scroll up && not at north edge
-			y = -currentTranslateY;
-		else if (y < 0 && currentTranslateY + y < maxTranslateY)
-			// scroll down && not at south edge
-			y = maxTranslateY - currentTranslateY;
-
-		if (x != 0d || y != 0d) {
-			AffineTransform at = AffineTransform.getTranslateInstance(x, y);
-			rt.preConcatenate(at);
-			c.setRenderingTransform(rt);
-			dispatchDragEvent(x, y);
-		}
-	}
-}

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-graph-view/src/main/java/net/sf/taverna/t2/workbench/views/graph/GraphViewComponent.java
----------------------------------------------------------------------
diff --git a/taverna-workbench-graph-view/src/main/java/net/sf/taverna/t2/workbench/views/graph/GraphViewComponent.java b/taverna-workbench-graph-view/src/main/java/net/sf/taverna/t2/workbench/views/graph/GraphViewComponent.java
deleted file mode 100644
index 55bcf3f..0000000
--- a/taverna-workbench-graph-view/src/main/java/net/sf/taverna/t2/workbench/views/graph/GraphViewComponent.java
+++ /dev/null
@@ -1,548 +0,0 @@
-/*******************************************************************************
- * Copyright (C) 2007 The University of Manchester
- *
- *  Modifications to the initial code base are copyright of their
- *  respective authors, or their employers as appropriate.
- *
- *  This program is free software; you can redistribute it and/or
- *  modify it under the terms of the GNU Lesser General Public License
- *  as published by the Free Software Foundation; either version 2.1 of
- *  the License, or (at your option) any later version.
- *
- *  This program is distributed in the hope that it will be useful, but
- *  WITHOUT ANY WARRANTY; without even the implied warranty of
- *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
- *  Lesser General Public License for more details.
- *
- *  You should have received a copy of the GNU Lesser General Public
- *  License along with this program; if not, write to the Free Software
- *  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
- ******************************************************************************/
-package net.sf.taverna.t2.workbench.views.graph;
-
-import static java.awt.BorderLayout.CENTER;
-import static java.awt.BorderLayout.NORTH;
-import static javax.swing.Action.SHORT_DESCRIPTION;
-import static javax.swing.Action.SMALL_ICON;
-import static javax.swing.BoxLayout.PAGE_AXIS;
-import static net.sf.taverna.t2.workbench.icons.WorkbenchIcons.allportIcon;
-import static net.sf.taverna.t2.workbench.icons.WorkbenchIcons.blobIcon;
-import static net.sf.taverna.t2.workbench.icons.WorkbenchIcons.expandNestedIcon;
-import static net.sf.taverna.t2.workbench.icons.WorkbenchIcons.horizontalIcon;
-import static net.sf.taverna.t2.workbench.icons.WorkbenchIcons.noportIcon;
-import static net.sf.taverna.t2.workbench.icons.WorkbenchIcons.refreshIcon;
-import static net.sf.taverna.t2.workbench.icons.WorkbenchIcons.verticalIcon;
-import static net.sf.taverna.t2.workbench.icons.WorkbenchIcons.zoomInIcon;
-import static net.sf.taverna.t2.workbench.icons.WorkbenchIcons.zoomOutIcon;
-import static net.sf.taverna.t2.workbench.views.graph.config.GraphViewConfiguration.ALIGNMENT;
-import static net.sf.taverna.t2.workbench.views.graph.config.GraphViewConfiguration.ANIMATION_ENABLED;
-import static net.sf.taverna.t2.workbench.views.graph.config.GraphViewConfiguration.ANIMATION_SPEED;
-import static net.sf.taverna.t2.workbench.views.graph.config.GraphViewConfiguration.PORT_STYLE;
-import static org.apache.batik.swing.svg.AbstractJSVGComponent.ALWAYS_DYNAMIC;
-
-import java.awt.BorderLayout;
-import java.awt.CardLayout;
-import java.awt.event.ActionEvent;
-import java.awt.event.ActionListener;
-import java.awt.event.ComponentAdapter;
-import java.awt.event.ComponentEvent;
-import java.util.HashSet;
-import java.util.IdentityHashMap;
-import java.util.Map;
-import java.util.Set;
-
-import javax.swing.AbstractAction;
-import javax.swing.Action;
-import javax.swing.BoxLayout;
-import javax.swing.ButtonGroup;
-import javax.swing.ImageIcon;
-import javax.swing.JButton;
-import javax.swing.JPanel;
-import javax.swing.JToggleButton;
-import javax.swing.JToolBar;
-import javax.swing.Timer;
-import javax.swing.border.EmptyBorder;
-
-import net.sf.taverna.t2.lang.observer.Observable;
-import net.sf.taverna.t2.lang.observer.SwingAwareObserver;
-import net.sf.taverna.t2.ui.menu.MenuManager;
-import net.sf.taverna.t2.workbench.configuration.colour.ColourManager;
-import net.sf.taverna.t2.workbench.configuration.workbench.WorkbenchConfiguration;
-import net.sf.taverna.t2.workbench.edits.EditManager;
-import net.sf.taverna.t2.workbench.edits.EditManager.AbstractDataflowEditEvent;
-import net.sf.taverna.t2.workbench.edits.EditManager.EditManagerEvent;
-import net.sf.taverna.t2.workbench.file.FileManager;
-import net.sf.taverna.t2.workbench.file.events.ClosedDataflowEvent;
-import net.sf.taverna.t2.workbench.file.events.FileManagerEvent;
-import net.sf.taverna.t2.workbench.models.graph.Graph.Alignment;
-import net.sf.taverna.t2.workbench.models.graph.GraphController;
-import net.sf.taverna.t2.workbench.models.graph.GraphController.PortStyle;
-import net.sf.taverna.t2.workbench.models.graph.svg.SVGGraphController;
-import net.sf.taverna.t2.workbench.selection.SelectionManager;
-import net.sf.taverna.t2.workbench.selection.events.SelectionManagerEvent;
-import net.sf.taverna.t2.workbench.selection.events.WorkflowBundleSelectionEvent;
-import net.sf.taverna.t2.workbench.selection.events.WorkflowSelectionEvent;
-import net.sf.taverna.t2.workbench.ui.dndhandler.ServiceTransferHandler;
-import net.sf.taverna.t2.workbench.ui.zaria.UIComponentSPI;
-import net.sf.taverna.t2.workbench.views.graph.config.GraphViewConfiguration;
-import net.sf.taverna.t2.workbench.views.graph.menu.ResetDiagramAction;
-import net.sf.taverna.t2.workbench.views.graph.menu.ZoomInAction;
-import net.sf.taverna.t2.workbench.views.graph.menu.ZoomOutAction;
-
-import org.apache.batik.swing.JSVGCanvas;
-import org.apache.batik.swing.JSVGScrollPane;
-import org.apache.batik.swing.gvt.GVTTreeRendererAdapter;
-import org.apache.batik.swing.gvt.GVTTreeRendererEvent;
-import org.apache.log4j.Logger;
-
-import uk.org.taverna.commons.services.ServiceRegistry;
-import uk.org.taverna.scufl2.api.container.WorkflowBundle;
-import uk.org.taverna.scufl2.api.core.Workflow;
-
-/**
- * @author David Withers
- * @author Alex Nenadic
- * @author Tom Oinn
- */
-public class GraphViewComponent extends JPanel implements UIComponentSPI {
-	private static final long serialVersionUID = 7404937056378331528L;
-	private static final Logger logger = Logger.getLogger(GraphViewComponent.class);
-
-	private Workflow workflow;
-	private SVGGraphController graphController;
-	private JPanel diagramPanel;
-
-	private Map<WorkflowBundle, Set<Workflow>> workflowsMap = new IdentityHashMap<>();
-
-	private Map<Workflow, SVGGraphController> graphControllerMap = new IdentityHashMap<>();
-	private Map<Workflow, JPanel> diagramPanelMap = new IdentityHashMap<>();
-	private Map<Workflow, Action[]> diagramActionsMap = new IdentityHashMap<>();
-
-	private Timer timer;
-
-	private CardLayout cardLayout;
-
-	private final ColourManager colourManager;
-	private final EditManager editManager;
-	private final MenuManager menuManager;
-	private final GraphViewConfiguration graphViewConfiguration;
-	private final WorkbenchConfiguration workbenchConfiguration;
-	private final SelectionManager selectionManager;
-	private final ServiceRegistry serviceRegistry;
-
-	public GraphViewComponent(ColourManager colourManager,
-			EditManager editManager, FileManager fileManager,
-			MenuManager menuManager,
-			GraphViewConfiguration graphViewConfiguration,
-			WorkbenchConfiguration workbenchConfiguration,
-			SelectionManager selectionManager, ServiceRegistry serviceRegistry) {
-		this.colourManager = colourManager;
-		this.editManager = editManager;
-		this.menuManager = menuManager;
-		this.graphViewConfiguration = graphViewConfiguration;
-		this.workbenchConfiguration = workbenchConfiguration;
-		this.selectionManager = selectionManager;
-		this.serviceRegistry = serviceRegistry;
-
-		cardLayout = new CardLayout();
-		setLayout(cardLayout);
-
-		ActionListener taskPerformer = new ActionListener() {
-			@Override
-			public void actionPerformed(ActionEvent evt) {
-				if (graphController != null)
-					graphController.redraw();
-				timer.stop();
-			}
-		};
-		timer = new Timer(100, taskPerformer);
-
-		addComponentListener(new ComponentAdapter() {
-			@Override
-			public void componentResized(ComponentEvent e) {
-				if (timer.isRunning())
-					timer.restart();
-				else
-					timer.start();
-			}
-		});
-
-		editManager.addObserver(new EditManagerObserver());
-		selectionManager.addObserver(new SelectionManagerObserver());
-		fileManager.addObserver(new FileManagerObserver());
-	}
-
-	@Override
-	protected void finalize() throws Throwable {
-		if (timer != null)
-			timer.stop();
-	}
-
-	@Override
-	public String getName() {
-		return "Graph View Component";
-	}
-
-	@Override
-	public ImageIcon getIcon() {
-		return null;
-	}
-
-	@Override
-	public void onDisplay() {
-	}
-
-	@Override
-	public void onDispose() {
-		if (timer != null)
-			timer.stop();
-	}
-
-	private JPanel createDiagramPanel(Workflow workflow) {
-		final JPanel diagramPanel = new JPanel(new BorderLayout());
-
-		// get the default diagram settings
-		Alignment alignment = Alignment.valueOf(graphViewConfiguration
-				.getProperty(ALIGNMENT));
-		PortStyle portStyle = PortStyle.valueOf(graphViewConfiguration
-				.getProperty(PORT_STYLE));
-		boolean animationEnabled = Boolean.parseBoolean(graphViewConfiguration
-				.getProperty(ANIMATION_ENABLED));
-		int animationSpeed = Integer.parseInt(graphViewConfiguration
-				.getProperty(ANIMATION_SPEED));
-
-		// create an SVG canvas
-		final JSVGCanvas svgCanvas = new JSVGCanvas(null, true, false);
-		svgCanvas.setEnableZoomInteractor(false);
-		svgCanvas.setEnableRotateInteractor(false);
-		svgCanvas.setDocumentState(ALWAYS_DYNAMIC);
-		svgCanvas.setTransferHandler(new ServiceTransferHandler(editManager,
-				menuManager, selectionManager, serviceRegistry));
-
-		AutoScrollInteractor asi = new AutoScrollInteractor(svgCanvas);
-		svgCanvas.addMouseListener(asi);
-		svgCanvas.addMouseMotionListener(asi);
-
-		final JSVGScrollPane svgScrollPane = new MySvgScrollPane(svgCanvas);
-
-		GVTTreeRendererAdapter gvtTreeRendererAdapter = new GVTTreeRendererAdapter() {
-			@Override
-			public void gvtRenderingCompleted(GVTTreeRendererEvent e) {
-				logger.info("Rendered svg");
-				svgScrollPane.reset();
-				diagramPanel.revalidate();
-			}
-		};
-		svgCanvas.addGVTTreeRendererListener(gvtTreeRendererAdapter);
-
-		// create a graph controller
-		SVGGraphController svgGraphController = new SVGGraphController(
-				workflow, selectionManager.getSelectedProfile(), false,
-				svgCanvas, alignment, portStyle, editManager, menuManager,
-				colourManager, workbenchConfiguration);
-		svgGraphController.setDataflowSelectionModel(selectionManager
-				.getDataflowSelectionModel(workflow.getParent()));
-		svgGraphController.setAnimationSpeed(animationEnabled ? animationSpeed
-				: 0);
-
-		graphControllerMap.put(workflow, svgGraphController);
-
-		// Toolbar with actions related to graph
-		JToolBar graphActionsToolbar = graphActionsToolbar(workflow,
-				svgGraphController, svgCanvas, alignment, portStyle);
-		graphActionsToolbar.setAlignmentX(LEFT_ALIGNMENT);
-		graphActionsToolbar.setFloatable(false);
-
-		// Panel to hold the toolbars
-		JPanel toolbarPanel = new JPanel();
-		toolbarPanel.setLayout(new BoxLayout(toolbarPanel, PAGE_AXIS));
-		toolbarPanel.add(graphActionsToolbar);
-
-		diagramPanel.add(toolbarPanel, NORTH);
-		diagramPanel.add(svgScrollPane, CENTER);
-
-		// JTextField workflowHierarchy = new JTextField(workflow.getName());
-		// diagramPanel.add(workflowHierarchy, BorderLayout.SOUTH);
-
-		return diagramPanel;
-	}
-
-	@SuppressWarnings("serial")
-	private JToolBar graphActionsToolbar(Workflow workflow,
-			final SVGGraphController graphController, JSVGCanvas svgCanvas,
-			Alignment alignment, PortStyle portStyle) {
-		JToolBar toolBar = new JToolBar();
-
-		JButton resetDiagramButton = new JButton();
-		resetDiagramButton.setBorder(new EmptyBorder(0, 2, 0, 2));
-		JButton zoomInButton = new JButton();
-		zoomInButton.setBorder(new EmptyBorder(0, 2, 0, 2));
-		JButton zoomOutButton = new JButton();
-		zoomOutButton.setBorder(new EmptyBorder(0, 2, 0, 2));
-
-		Action resetDiagramAction = svgCanvas.new ResetTransformAction();
-		ResetDiagramAction.setDesignAction(resetDiagramAction);
-		resetDiagramAction.putValue(SHORT_DESCRIPTION, "Reset Diagram");
-		resetDiagramAction.putValue(SMALL_ICON, refreshIcon);
-		resetDiagramButton.setAction(resetDiagramAction);
-
-		Action zoomInAction = svgCanvas.new ZoomAction(1.2);
-		ZoomInAction.setDesignAction(zoomInAction);
-		zoomInAction.putValue(SHORT_DESCRIPTION, "Zoom In");
-		zoomInAction.putValue(SMALL_ICON, zoomInIcon);
-		zoomInButton.setAction(zoomInAction);
-
-		Action zoomOutAction = svgCanvas.new ZoomAction(1 / 1.2);
-		ZoomOutAction.setDesignAction(zoomOutAction);
-		zoomOutAction.putValue(SHORT_DESCRIPTION, "Zoom Out");
-		zoomOutAction.putValue(SMALL_ICON, zoomOutIcon);
-		zoomOutButton.setAction(zoomOutAction);
-
-		diagramActionsMap.put(workflow, new Action[] { resetDiagramAction,
-				zoomInAction, zoomOutAction });
-
-		toolBar.add(resetDiagramButton);
-		toolBar.add(zoomInButton);
-		toolBar.add(zoomOutButton);
-
-		toolBar.addSeparator();
-
-		ButtonGroup nodeTypeGroup = new ButtonGroup();
-
-		JToggleButton noPorts = new JToggleButton();
-		JToggleButton allPorts = new JToggleButton();
-		JToggleButton blobs = new JToggleButton();
-		nodeTypeGroup.add(noPorts);
-		nodeTypeGroup.add(allPorts);
-		nodeTypeGroup.add(blobs);
-
-		if (portStyle.equals(PortStyle.NONE))
-			noPorts.setSelected(true);
-		else if (portStyle.equals(PortStyle.ALL))
-			allPorts.setSelected(true);
-		else
-			blobs.setSelected(true);
-
-		noPorts.setAction(new AbstractAction() {
-			@Override
-			public void actionPerformed(ActionEvent arg0) {
-				graphController.setPortStyle(PortStyle.NONE);
-				graphController.redraw();
-			}
-		});
-		noPorts.getAction().putValue(SHORT_DESCRIPTION,
-				"Display no service ports");
-		noPorts.getAction().putValue(SMALL_ICON, noportIcon);
-		noPorts.setFocusPainted(false);
-
-		allPorts.setAction(new AbstractAction() {
-			@Override
-			public void actionPerformed(ActionEvent arg0) {
-				graphController.setPortStyle(PortStyle.ALL);
-				graphController.redraw();
-			}
-		});
-		allPorts.getAction().putValue(SHORT_DESCRIPTION,
-				"Display all service ports");
-		allPorts.getAction().putValue(SMALL_ICON, allportIcon);
-		allPorts.setFocusPainted(false);
-
-		blobs.setAction(new AbstractAction() {
-			@Override
-			public void actionPerformed(ActionEvent arg0) {
-				graphController.setPortStyle(PortStyle.BLOB);
-				graphController.redraw();
-			}
-		});
-		blobs.getAction().putValue(SHORT_DESCRIPTION,
-				"Display services as circles");
-		blobs.getAction().putValue(SMALL_ICON, blobIcon);
-		blobs.setFocusPainted(false);
-
-		toolBar.add(noPorts);
-		toolBar.add(allPorts);
-		toolBar.add(blobs);
-
-		toolBar.addSeparator();
-
-		ButtonGroup alignmentGroup = new ButtonGroup();
-
-		JToggleButton vertical = new JToggleButton();
-		JToggleButton horizontal = new JToggleButton();
-		alignmentGroup.add(vertical);
-		alignmentGroup.add(horizontal);
-
-		if (alignment.equals(Alignment.VERTICAL)) {
-			vertical.setSelected(true);
-		} else {
-			horizontal.setSelected(true);
-		}
-
-		vertical.setAction(new AbstractAction() {
-			@Override
-			public void actionPerformed(ActionEvent arg0) {
-				graphController.setAlignment(Alignment.VERTICAL);
-				graphController.redraw();
-			}
-		});
-		vertical.getAction().putValue(SHORT_DESCRIPTION,
-				"Align services vertically");
-		vertical.getAction().putValue(SMALL_ICON, verticalIcon);
-		vertical.setFocusPainted(false);
-
-		horizontal.setAction(new AbstractAction() {
-			@Override
-			public void actionPerformed(ActionEvent arg0) {
-				graphController.setAlignment(Alignment.HORIZONTAL);
-				graphController.redraw();
-			}
-
-		});
-		horizontal.getAction().putValue(SHORT_DESCRIPTION,
-				"Align services horizontally");
-		horizontal.getAction().putValue(SMALL_ICON, horizontalIcon);
-		horizontal.setFocusPainted(false);
-
-		toolBar.add(vertical);
-		toolBar.add(horizontal);
-
-		toolBar.addSeparator();
-
-		JToggleButton expandNested = new JToggleButton();
-		expandNested.setSelected(true);
-
-		expandNested.setAction(new AbstractAction() {
-			@Override
-			public void actionPerformed(ActionEvent arg0) {
-				graphController.setExpandNestedDataflows(!graphController
-						.expandNestedDataflows());
-				graphController.redraw();
-			}
-		});
-		expandNested.getAction().putValue(SHORT_DESCRIPTION,
-				"Expand Nested Workflows");
-		expandNested.getAction().putValue(SMALL_ICON, expandNestedIcon);
-		expandNested.setFocusPainted(false);
-		toolBar.add(expandNested);
-
-		return toolBar;
-	}
-
-	/**
-	 * Sets the Workflow to display in the graph view.
-	 *
-	 * @param workflow
-	 */
-	private void setWorkflow(Workflow workflow) {
-		this.workflow = workflow;
-		if (!diagramPanelMap.containsKey(workflow))
-			addWorkflow(workflow);
-		graphController = graphControllerMap.get(workflow);
-		diagramPanel = diagramPanelMap.get(workflow);
-		Action[] actions = diagramActionsMap.get(workflow);
-		if (actions != null && actions.length == 3) {
-			ResetDiagramAction.setDesignAction(actions[0]);
-			ZoomInAction.setDesignAction(actions[1]);
-			ZoomOutAction.setDesignAction(actions[2]);
-		}
-		cardLayout.show(this, String.valueOf(diagramPanel.hashCode()));
-		graphController.redraw();
-	}
-
-	private void addWorkflow(Workflow workflow) {
-		JPanel newDiagramPanel = createDiagramPanel(workflow);
-		add(newDiagramPanel, String.valueOf(newDiagramPanel.hashCode()));
-		diagramPanelMap.put(workflow, newDiagramPanel);
-		if (!workflowsMap.containsKey(workflow.getParent()))
-			workflowsMap.put(workflow.getParent(), new HashSet<Workflow>());
-		workflowsMap.get(workflow.getParent()).add(workflow);
-	}
-
-	private void removeWorkflow(Workflow workflow) {
-		JPanel panel = diagramPanelMap.remove(workflow);
-		if (panel != null)
-			remove(panel);
-		SVGGraphController removedController = graphControllerMap.remove(workflow);
-		if (removedController != null)
-			removedController.shutdown();
-		diagramActionsMap.remove(workflow);
-		Set<Workflow> workflows = workflowsMap.get(workflow.getParent());
-		if (workflows != null)
-			workflows.remove(workflow);
-	}
-
-	public GraphController getGraphController(Workflow workflow) {
-		return graphControllerMap.get(workflow);
-	}
-
-	private class EditManagerObserver extends
-			SwingAwareObserver<EditManagerEvent> {
-		@Override
-		public void notifySwing(Observable<EditManagerEvent> sender,
-				EditManagerEvent message) {
-			if (!(message instanceof AbstractDataflowEditEvent))
-				return;
-			AbstractDataflowEditEvent dataflowEditEvent = (AbstractDataflowEditEvent) message;
-			if (dataflowEditEvent.getDataFlow() != workflow.getParent())
-				return;
-			
-			boolean animationEnabled = Boolean
-					.parseBoolean(graphViewConfiguration
-							.getProperty(ANIMATION_ENABLED));
-			int animationSpeed = (animationEnabled ? Integer
-					.parseInt(graphViewConfiguration
-							.getProperty(ANIMATION_SPEED)) : 0);
-			boolean animationSettingChanged = (animationEnabled != (graphController
-					.getAnimationSpeed() != 0));
-
-			if (graphController.isDotMissing() || animationSettingChanged) {
-				removeWorkflow(workflow);
-				setWorkflow(workflow);
-			} else {
-				if (animationSpeed != graphController.getAnimationSpeed())
-					graphController.setAnimationSpeed(animationSpeed);
-				graphController.redraw();
-			}
-		}
-	}
-
-	private class FileManagerObserver extends SwingAwareObserver<FileManagerEvent> {
-		@Override
-		public void notifySwing(Observable<FileManagerEvent> sender, final FileManagerEvent message) {
-			if (!(message instanceof ClosedDataflowEvent))
-				return;
-			ClosedDataflowEvent closedDataflowEvent = (ClosedDataflowEvent) message;
-
-			WorkflowBundle workflowBundle = closedDataflowEvent.getDataflow();
-			if (workflowsMap.containsKey(workflowBundle))
-				for (Workflow workflow : workflowsMap.remove(workflowBundle))
-					removeWorkflow(workflow);
-		}
-	}
-
-	private class SelectionManagerObserver extends
-			SwingAwareObserver<SelectionManagerEvent> {
-		@Override
-		public void notifySwing(Observable<SelectionManagerEvent> sender,
-				SelectionManagerEvent message) {
-			if (message instanceof WorkflowSelectionEvent)
-				setWorkflow(selectionManager.getSelectedWorkflow());
-			else if (message instanceof WorkflowBundleSelectionEvent)
-				setWorkflow(selectionManager.getSelectedWorkflow());
-		}
-	}
-
-	private class MySvgScrollPane extends JSVGScrollPane {
-		private static final long serialVersionUID = -1539947450704269879L;
-
-		public MySvgScrollPane(JSVGCanvas canvas) {
-			super(canvas);
-		}
-
-		@Override
-		public void reset() {
-			super.resizeScrollBars();
-			super.reset();
-		}
-	}
-}

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-graph-view/src/main/java/net/sf/taverna/t2/workbench/views/graph/GraphViewComponentFactory.java
----------------------------------------------------------------------
diff --git a/taverna-workbench-graph-view/src/main/java/net/sf/taverna/t2/workbench/views/graph/GraphViewComponentFactory.java b/taverna-workbench-graph-view/src/main/java/net/sf/taverna/t2/workbench/views/graph/GraphViewComponentFactory.java
deleted file mode 100644
index 85f2929..0000000
--- a/taverna-workbench-graph-view/src/main/java/net/sf/taverna/t2/workbench/views/graph/GraphViewComponentFactory.java
+++ /dev/null
@@ -1,100 +0,0 @@
-/*******************************************************************************
- * Copyright (C) 2007 The University of Manchester
- *
- *  Modifications to the initial code base are copyright of their
- *  respective authors, or their employers as appropriate.
- *
- *  This program is free software; you can redistribute it and/or
- *  modify it under the terms of the GNU Lesser General Public License
- *  as published by the Free Software Foundation; either version 2.1 of
- *  the License, or (at your option) any later version.
- *
- *  This program is distributed in the hope that it will be useful, but
- *  WITHOUT ANY WARRANTY; without even the implied warranty of
- *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
- *  Lesser General Public License for more details.
- *
- *  You should have received a copy of the GNU Lesser General Public
- *  License along with this program; if not, write to the Free Software
- *  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
- ******************************************************************************/
-package net.sf.taverna.t2.workbench.views.graph;
-
-import javax.swing.ImageIcon;
-
-import uk.org.taverna.commons.services.ServiceRegistry;
-
-import net.sf.taverna.t2.ui.menu.MenuManager;
-import net.sf.taverna.t2.workbench.configuration.colour.ColourManager;
-import net.sf.taverna.t2.workbench.configuration.workbench.WorkbenchConfiguration;
-import net.sf.taverna.t2.workbench.edits.EditManager;
-import net.sf.taverna.t2.workbench.file.FileManager;
-import net.sf.taverna.t2.workbench.selection.SelectionManager;
-import net.sf.taverna.t2.workbench.ui.zaria.UIComponentFactorySPI;
-import net.sf.taverna.t2.workbench.ui.zaria.UIComponentSPI;
-import net.sf.taverna.t2.workbench.views.graph.config.GraphViewConfiguration;
-
-/**
- * @author David Withers
- */
-public class GraphViewComponentFactory implements UIComponentFactorySPI {
-	private EditManager editManager;
-	private FileManager fileManager;
-	private MenuManager menuManager;
-	private SelectionManager selectionManager;
-	private ColourManager colourManager;
-	private WorkbenchConfiguration workbenchConfiguration;
-	private GraphViewConfiguration graphViewConfiguration;
-	private ServiceRegistry serviceRegistry;
-
-	@Override
-	public UIComponentSPI getComponent() {
-		return new GraphViewComponent(colourManager, editManager, fileManager,
-				menuManager, graphViewConfiguration, workbenchConfiguration,
-				selectionManager, serviceRegistry);
-	}
-
-	@Override
-	public ImageIcon getIcon() {
-		return null;
-	}
-
-	@Override
-	public String getName() {
-		return "Graph View";
-	}
-
-	public void setEditManager(EditManager editManager) {
-		this.editManager = editManager;
-	}
-
-	public void setFileManager(FileManager fileManager) {
-		this.fileManager = fileManager;
-	}
-
-	public void setMenuManager(MenuManager menuManager) {
-		this.menuManager = menuManager;
-	}
-
-	public void setSelectionManager(SelectionManager selectionManager) {
-		this.selectionManager = selectionManager;
-	}
-
-	public void setColourManager(ColourManager colourManager) {
-		this.colourManager = colourManager;
-	}
-
-	public void setWorkbenchConfiguration(
-			WorkbenchConfiguration workbenchConfiguration) {
-		this.workbenchConfiguration = workbenchConfiguration;
-	}
-
-	public void setGraphViewConfiguration(
-			GraphViewConfiguration graphViewConfiguration) {
-		this.graphViewConfiguration = graphViewConfiguration;
-	}
-
-	public void setServiceRegistry(ServiceRegistry serviceRegistry) {
-		this.serviceRegistry = serviceRegistry;
-	}
-}

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-graph-view/src/main/java/net/sf/taverna/t2/workbench/views/graph/actions/AddWFInputAction.java
----------------------------------------------------------------------
diff --git a/taverna-workbench-graph-view/src/main/java/net/sf/taverna/t2/workbench/views/graph/actions/AddWFInputAction.java b/taverna-workbench-graph-view/src/main/java/net/sf/taverna/t2/workbench/views/graph/actions/AddWFInputAction.java
deleted file mode 100644
index 8c16e4a..0000000
--- a/taverna-workbench-graph-view/src/main/java/net/sf/taverna/t2/workbench/views/graph/actions/AddWFInputAction.java
+++ /dev/null
@@ -1,69 +0,0 @@
-/*******************************************************************************
- * Copyright (C) 2007 The University of Manchester
- *
- *  Modifications to the initial code base are copyright of their
- *  respective authors, or their employers as appropriate.
- *
- *  This program is free software; you can redistribute it and/or
- *  modify it under the terms of the GNU Lesser General Public License
- *  as published by the Free Software Foundation; either version 2.1 of
- *  the License, or (at your option) any later version.
- *
- *  This program is distributed in the hope that it will be useful, but
- *  WITHOUT ANY WARRANTY; without even the implied warranty of
- *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
- *  Lesser General Public License for more details.
- *
- *  You should have received a copy of the GNU Lesser General Public
- *  License along with this program; if not, write to the Free Software
- *  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
- ******************************************************************************/
-package net.sf.taverna.t2.workbench.views.graph.actions;
-
-import static java.awt.event.InputEvent.ALT_DOWN_MASK;
-import static java.awt.event.InputEvent.SHIFT_DOWN_MASK;
-import static java.awt.event.KeyEvent.VK_I;
-import static javax.swing.KeyStroke.getKeyStroke;
-import static net.sf.taverna.t2.workbench.icons.WorkbenchIcons.inputIcon;
-
-import java.awt.event.ActionEvent;
-
-import javax.swing.AbstractAction;
-
-import net.sf.taverna.t2.ui.menu.DesignOnlyAction;
-import net.sf.taverna.t2.workbench.design.actions.AddDataflowInputAction;
-import net.sf.taverna.t2.workbench.edits.EditManager;
-import net.sf.taverna.t2.workbench.selection.SelectionManager;
-import uk.org.taverna.scufl2.api.core.Workflow;
-
-/**
- * An action that adds a workflow input.
- * 
- * @author Alex Nenadic
- * @author Alan R Williams
- */
-@SuppressWarnings("serial")
-public class AddWFInputAction extends AbstractAction implements
-		DesignOnlyAction {
-	private final EditManager editManager;
-	private final SelectionManager selectionManager;
-
-	public AddWFInputAction(EditManager editManager,
-			SelectionManager selectionManager) {
-		super();
-		this.editManager = editManager;
-		this.selectionManager = selectionManager;
-		putValue(SMALL_ICON, inputIcon);
-		putValue(NAME, "Workflow input port");
-		putValue(SHORT_DESCRIPTION, "Workflow input port");
-		putValue(ACCELERATOR_KEY,
-				getKeyStroke(VK_I, SHIFT_DOWN_MASK | ALT_DOWN_MASK));
-	}
-
-	@Override
-	public void actionPerformed(ActionEvent e) {
-		Workflow workflow = selectionManager.getSelectedWorkflow();
-		new AddDataflowInputAction(workflow, null, editManager,
-				selectionManager).actionPerformed(e);
-	}
-}

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-graph-view/src/main/java/net/sf/taverna/t2/workbench/views/graph/actions/AddWFOutputAction.java
----------------------------------------------------------------------
diff --git a/taverna-workbench-graph-view/src/main/java/net/sf/taverna/t2/workbench/views/graph/actions/AddWFOutputAction.java b/taverna-workbench-graph-view/src/main/java/net/sf/taverna/t2/workbench/views/graph/actions/AddWFOutputAction.java
deleted file mode 100644
index 4027773..0000000
--- a/taverna-workbench-graph-view/src/main/java/net/sf/taverna/t2/workbench/views/graph/actions/AddWFOutputAction.java
+++ /dev/null
@@ -1,69 +0,0 @@
-/*******************************************************************************
- * Copyright (C) 2007 The University of Manchester
- *
- *  Modifications to the initial code base are copyright of their
- *  respective authors, or their employers as appropriate.
- *
- *  This program is free software; you can redistribute it and/or
- *  modify it under the terms of the GNU Lesser General Public License
- *  as published by the Free Software Foundation; either version 2.1 of
- *  the License, or (at your option) any later version.
- *
- *  This program is distributed in the hope that it will be useful, but
- *  WITHOUT ANY WARRANTY; without even the implied warranty of
- *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
- *  Lesser General Public License for more details.
- *
- *  You should have received a copy of the GNU Lesser General Public
- *  License along with this program; if not, write to the Free Software
- *  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
- ******************************************************************************/
-package net.sf.taverna.t2.workbench.views.graph.actions;
-
-import static java.awt.event.InputEvent.ALT_DOWN_MASK;
-import static java.awt.event.InputEvent.SHIFT_DOWN_MASK;
-import static java.awt.event.KeyEvent.VK_O;
-import static javax.swing.KeyStroke.getKeyStroke;
-
-import java.awt.event.ActionEvent;
-
-import javax.swing.AbstractAction;
-
-import net.sf.taverna.t2.ui.menu.DesignOnlyAction;
-import net.sf.taverna.t2.workbench.design.actions.AddDataflowOutputAction;
-import net.sf.taverna.t2.workbench.edits.EditManager;
-import net.sf.taverna.t2.workbench.icons.WorkbenchIcons;
-import net.sf.taverna.t2.workbench.selection.SelectionManager;
-import uk.org.taverna.scufl2.api.core.Workflow;
-
-/**
- * An action that adds a workflow output.
- * 
- * @author Alex Nenadic
- * @author Alan R Williams
- */
-@SuppressWarnings("serial")
-public class AddWFOutputAction extends AbstractAction implements
-		DesignOnlyAction {
-	private final EditManager editManager;
-	private final SelectionManager selectionManager;
-
-	public AddWFOutputAction(EditManager editManager,
-			SelectionManager selectionManager) {
-		super();
-		this.editManager = editManager;
-		this.selectionManager = selectionManager;
-		putValue(SMALL_ICON, WorkbenchIcons.outputIcon);
-		putValue(NAME, "Workflow output port");
-		putValue(SHORT_DESCRIPTION, "Workflow output port");
-		putValue(ACCELERATOR_KEY,
-				getKeyStroke(VK_O, SHIFT_DOWN_MASK | ALT_DOWN_MASK));
-	}
-
-	@Override
-	public void actionPerformed(ActionEvent e) {
-		Workflow workflow = selectionManager.getSelectedWorkflow();
-		new AddDataflowOutputAction(workflow, null, editManager,
-				selectionManager).actionPerformed(e);
-	}
-}

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-graph-view/src/main/java/net/sf/taverna/t2/workbench/views/graph/actions/DeleteGraphComponentAction.java
----------------------------------------------------------------------
diff --git a/taverna-workbench-graph-view/src/main/java/net/sf/taverna/t2/workbench/views/graph/actions/DeleteGraphComponentAction.java b/taverna-workbench-graph-view/src/main/java/net/sf/taverna/t2/workbench/views/graph/actions/DeleteGraphComponentAction.java
deleted file mode 100644
index 86849b6..0000000
--- a/taverna-workbench-graph-view/src/main/java/net/sf/taverna/t2/workbench/views/graph/actions/DeleteGraphComponentAction.java
+++ /dev/null
@@ -1,180 +0,0 @@
-/*******************************************************************************
- * Copyright (C) 2007 The University of Manchester
- *
- *  Modifications to the initial code base are copyright of their
- *  respective authors, or their employers as appropriate.
- *
- *  This program is free software; you can redistribute it and/or
- *  modify it under the terms of the GNU Lesser General Public License
- *  as published by the Free Software Foundation; either version 2.1 of
- *  the License, or (at your option) any later version.
- *
- *  This program is distributed in the hope that it will be useful, but
- *  WITHOUT ANY WARRANTY; without even the implied warranty of
- *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
- *  Lesser General Public License for more details.
- *
- *  You should have received a copy of the GNU Lesser General Public
- *  License along with this program; if not, write to the Free Software
- *  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
- ******************************************************************************/
-package net.sf.taverna.t2.workbench.views.graph.actions;
-
-import static java.awt.event.KeyEvent.VK_DELETE;
-import static javax.swing.KeyStroke.getKeyStroke;
-import static net.sf.taverna.t2.workbench.icons.WorkbenchIcons.deleteIcon;
-
-import java.awt.event.ActionEvent;
-import java.util.Set;
-
-import javax.swing.AbstractAction;
-
-import net.sf.taverna.t2.lang.observer.Observable;
-import net.sf.taverna.t2.lang.observer.Observer;
-import net.sf.taverna.t2.lang.observer.SwingAwareObserver;
-import net.sf.taverna.t2.ui.menu.DesignOnlyAction;
-import net.sf.taverna.t2.workbench.design.actions.RemoveConditionAction;
-import net.sf.taverna.t2.workbench.design.actions.RemoveDataflowInputPortAction;
-import net.sf.taverna.t2.workbench.design.actions.RemoveDataflowOutputPortAction;
-import net.sf.taverna.t2.workbench.design.actions.RemoveDatalinkAction;
-import net.sf.taverna.t2.workbench.design.actions.RemoveProcessorAction;
-import net.sf.taverna.t2.workbench.edits.EditManager;
-import net.sf.taverna.t2.workbench.selection.DataflowSelectionModel;
-import net.sf.taverna.t2.workbench.selection.SelectionManager;
-import net.sf.taverna.t2.workbench.selection.events.DataflowSelectionMessage;
-import net.sf.taverna.t2.workbench.selection.events.SelectionManagerEvent;
-import net.sf.taverna.t2.workbench.selection.events.WorkflowBundleSelectionEvent;
-import uk.org.taverna.scufl2.api.container.WorkflowBundle;
-import uk.org.taverna.scufl2.api.core.ControlLink;
-import uk.org.taverna.scufl2.api.core.DataLink;
-import uk.org.taverna.scufl2.api.core.Processor;
-import uk.org.taverna.scufl2.api.port.InputWorkflowPort;
-import uk.org.taverna.scufl2.api.port.OutputWorkflowPort;
-
-/**
- * An action that deletes the selected graph component.
- *
- * @author Alex Nenadic
- */
-@SuppressWarnings("serial")
-public class DeleteGraphComponentAction extends AbstractAction implements DesignOnlyAction {
-	/** Current workflow's selection model event observer.*/
-	private Observer<DataflowSelectionMessage> workflowSelectionObserver = new DataflowSelectionObserver();
-
-	private final EditManager editManager;
-	private final SelectionManager selectionManager;
-
-	public DeleteGraphComponentAction(EditManager editManager, final SelectionManager selectionManager) {
-		super();
-		this.editManager = editManager;
-		this.selectionManager = selectionManager;
-		putValue(SMALL_ICON, deleteIcon);
-		putValue(NAME, "Delete");
-		putValue(SHORT_DESCRIPTION, "Delete selected component");
-		putValue(ACCELERATOR_KEY, getKeyStroke(VK_DELETE, 0));
-		setEnabled(false);
-
-		selectionManager.addObserver(new SelectionManagerObserver());
-	}
-
-	@Override
-	public void actionPerformed(ActionEvent e) {
-		WorkflowBundle workflowBundle = selectionManager
-				.getSelectedWorkflowBundle();
-		DataflowSelectionModel dataFlowSelectionModel = selectionManager
-				.getDataflowSelectionModel(workflowBundle);
-		// Get all selected components
-		Set<Object> selectedWFComponents = dataFlowSelectionModel.getSelection();
-		for (Object selectedWFComponent : selectedWFComponents)
-			if (selectedWFComponent instanceof Processor) {
-				Processor processor = (Processor) selectedWFComponent;
-				new RemoveProcessorAction(processor.getParent(), processor,
-						null, editManager, selectionManager).actionPerformed(e);
-			} else if (selectedWFComponent instanceof DataLink) {
-				DataLink dataLink = (DataLink) selectedWFComponent;
-				new RemoveDatalinkAction(dataLink.getParent(), dataLink, null,
-						editManager, selectionManager).actionPerformed(e);
-			} else if (selectedWFComponent instanceof InputWorkflowPort) {
-				InputWorkflowPort port = (InputWorkflowPort) selectedWFComponent;
-				new RemoveDataflowInputPortAction(port.getParent(), port, null,
-						editManager, selectionManager).actionPerformed(e);
-			} else if (selectedWFComponent instanceof OutputWorkflowPort) {
-				OutputWorkflowPort port = (OutputWorkflowPort) selectedWFComponent;
-				new RemoveDataflowOutputPortAction(port.getParent(), port,
-						null, editManager, selectionManager).actionPerformed(e);
-			} else if (selectedWFComponent instanceof ControlLink) {
-				ControlLink controlLink = (ControlLink) selectedWFComponent;
-				new RemoveConditionAction(controlLink.getParent(), controlLink,
-						null, editManager, selectionManager).actionPerformed(e);
-			}
-	}
-
-	/**
-	 * Check if action should be enabled or disabled and update its status.
-	 */
-	public void updateStatus(WorkflowBundle selectionWorkflowBundle) {
-		if (selectionWorkflowBundle != null) {
-			DataflowSelectionModel selectionModel = selectionManager
-					.getDataflowSelectionModel(selectionWorkflowBundle);
-			Set<Object> selection = selectionModel.getSelection();
-			if (!selection.isEmpty()) {
-				// Take the first selected item - we only support single selections anyway
-				Object selected = selection.toArray()[0];
-				if ((selected instanceof Processor)
-						|| (selected instanceof InputWorkflowPort)
-						|| (selected instanceof OutputWorkflowPort)
-						|| (selected instanceof DataLink)
-						|| (selected instanceof ControlLink)) {
-					setEnabled(true);
-					return;
-				}
-			}
-		}
-		setEnabled(false);
-	}
-
-	/**
-	 * Observes events on workflow Selection Manager, i.e. when a workflow node
-	 * is selected in the graph view, and enables/disables this action
-	 * accordingly.
-	 */
-	private final class DataflowSelectionObserver extends
-			SwingAwareObserver<DataflowSelectionMessage> {
-		@Override
-		public void notifySwing(Observable<DataflowSelectionMessage> sender,
-				DataflowSelectionMessage message) {
-			updateStatus(selectionManager.getSelectedWorkflowBundle());
-		}
-	}
-
-	private final class SelectionManagerObserver extends
-			SwingAwareObserver<SelectionManagerEvent> {
-		@Override
-		public void notifySwing(Observable<SelectionManagerEvent> sender,
-				SelectionManagerEvent message) {
-			if (!(message instanceof WorkflowBundleSelectionEvent))
-				return;
-			WorkflowBundleSelectionEvent workflowBundleSelectionEvent = (WorkflowBundleSelectionEvent) message;
-			WorkflowBundle oldFlow = workflowBundleSelectionEvent
-					.getPreviouslySelectedWorkflowBundle();
-			WorkflowBundle newFlow = workflowBundleSelectionEvent
-					.getSelectedWorkflowBundle();
-
-			/*
-			 * Remove the workflow selection model listener from the previous
-			 * (if any) and add to the new workflow (if any)
-			 */
-			if (oldFlow != null)
-				selectionManager.getDataflowSelectionModel(oldFlow)
-						.removeObserver(workflowSelectionObserver);
-
-			// Update the buttons status as current dataflow has changed
-			updateStatus(newFlow);
-
-			if (newFlow != null)
-				selectionManager.getDataflowSelectionModel(newFlow)
-						.addObserver(workflowSelectionObserver);
-		}
-	}
-
-}

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-graph-view/src/main/java/net/sf/taverna/t2/workbench/views/graph/actions/RenameWFInputOutputProcessorAction.java
----------------------------------------------------------------------
diff --git a/taverna-workbench-graph-view/src/main/java/net/sf/taverna/t2/workbench/views/graph/actions/RenameWFInputOutputProcessorAction.java b/taverna-workbench-graph-view/src/main/java/net/sf/taverna/t2/workbench/views/graph/actions/RenameWFInputOutputProcessorAction.java
deleted file mode 100644
index f56a0e0..0000000
--- a/taverna-workbench-graph-view/src/main/java/net/sf/taverna/t2/workbench/views/graph/actions/RenameWFInputOutputProcessorAction.java
+++ /dev/null
@@ -1,184 +0,0 @@
-/*******************************************************************************
- * Copyright (C) 2007 The University of Manchester
- *
- *  Modifications to the initial code base are copyright of their
- *  respective authors, or their employers as appropriate.
- *
- *  This program is free software; you can redistribute it and/or
- *  modify it under the terms of the GNU Lesser General Public License
- *  as published by the Free Software Foundation; either version 2.1 of
- *  the License, or (at your option) any later version.
- *
- *  This program is distributed in the hope that it will be useful, but
- *  WITHOUT ANY WARRANTY; without even the implied warranty of
- *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
- *  Lesser General Public License for more details.
- *
- *  You should have received a copy of the GNU Lesser General Public
- *  License along with this program; if not, write to the Free Software
- *  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
- ******************************************************************************/
-package net.sf.taverna.t2.workbench.views.graph.actions;
-
-import static java.awt.event.KeyEvent.VK_F2;
-import static javax.swing.JOptionPane.WARNING_MESSAGE;
-import static javax.swing.JOptionPane.showMessageDialog;
-import static javax.swing.KeyStroke.getKeyStroke;
-
-import java.awt.event.ActionEvent;
-import java.util.Set;
-
-import javax.swing.AbstractAction;
-
-import net.sf.taverna.t2.lang.observer.Observable;
-import net.sf.taverna.t2.lang.observer.Observer;
-import net.sf.taverna.t2.lang.observer.SwingAwareObserver;
-import net.sf.taverna.t2.ui.menu.DesignOnlyAction;
-import net.sf.taverna.t2.workbench.design.actions.EditDataflowInputPortAction;
-import net.sf.taverna.t2.workbench.design.actions.EditDataflowOutputPortAction;
-import net.sf.taverna.t2.workbench.design.actions.RenameProcessorAction;
-import net.sf.taverna.t2.workbench.edits.EditManager;
-import net.sf.taverna.t2.workbench.icons.WorkbenchIcons;
-import net.sf.taverna.t2.workbench.selection.DataflowSelectionModel;
-import net.sf.taverna.t2.workbench.selection.SelectionManager;
-import net.sf.taverna.t2.workbench.selection.events.DataflowSelectionMessage;
-import net.sf.taverna.t2.workbench.selection.events.SelectionManagerEvent;
-import net.sf.taverna.t2.workbench.selection.events.WorkflowBundleSelectionEvent;
-import uk.org.taverna.scufl2.api.container.WorkflowBundle;
-import uk.org.taverna.scufl2.api.core.Processor;
-import uk.org.taverna.scufl2.api.port.InputWorkflowPort;
-import uk.org.taverna.scufl2.api.port.OutputWorkflowPort;
-
-/**
- * An action that allows user to rename workflow input, output or
- * processor, in case one of these is currently selected in the Graph View.
- *
- * @author Alex Nenadic
- */
-@SuppressWarnings("serial")
-public class RenameWFInputOutputProcessorAction extends AbstractAction implements DesignOnlyAction {
-	/** Current workflow's selection model event observer.*/
-	private Observer<DataflowSelectionMessage> workflowSelectionObserver = new DataflowSelectionObserver();
-
-	private final EditManager editManager;
-	private final SelectionManager selectionManager;
-
-	public RenameWFInputOutputProcessorAction(EditManager editManager,
-			final SelectionManager selectionManager) {
-		super();
-		this.editManager = editManager;
-		this.selectionManager = selectionManager;
-		putValue(SMALL_ICON, WorkbenchIcons.renameIcon);
-		putValue(NAME, "Rename");
-		putValue(SHORT_DESCRIPTION, "Rename inputs, outputs or services");
-		putValue(ACCELERATOR_KEY, getKeyStroke(VK_F2, 0));
-		setEnabled(false);
-
-		selectionManager.addObserver(new SelectionManagerObserver());
-	}
-
-	@Override
-	public void actionPerformed(ActionEvent e) {
-		WorkflowBundle workflowBundle = selectionManager
-				.getSelectedWorkflowBundle();
-		DataflowSelectionModel dataFlowSelectionModel = selectionManager
-				.getDataflowSelectionModel(workflowBundle);
-		// Get selected port
-		Set<Object> selectedWFComponents = dataFlowSelectionModel
-				.getSelection();
-		if (selectedWFComponents.size() > 1) {
-			showMessageDialog(
-					null,
-					"Only one workflow component should be selected for this action.",
-					"Warning", WARNING_MESSAGE);
-		} else {
-			Object selectedWFComponent = selectedWFComponents.toArray()[0];
-			if (selectedWFComponent instanceof InputWorkflowPort) {
-				InputWorkflowPort port = (InputWorkflowPort) selectedWFComponent;
-				new EditDataflowInputPortAction(port.getParent(), port, null,
-						editManager, selectionManager).actionPerformed(e);
-			} else if (selectedWFComponent instanceof OutputWorkflowPort) {
-				OutputWorkflowPort port = (OutputWorkflowPort) selectedWFComponent;
-				new EditDataflowOutputPortAction(port.getParent(), port, null,
-						editManager, selectionManager).actionPerformed(e);
-			} else if (selectedWFComponent instanceof Processor) {
-				Processor processor = (Processor) selectedWFComponent;
-				new RenameProcessorAction(processor.getParent(), processor,
-						null, editManager, selectionManager).actionPerformed(e);
-			} else { // should not happen as the button will be disabled otherwise, but ...
-				showMessageDialog(
-						null,
-						"This action does not apply for the selected component.",
-						"Warning", WARNING_MESSAGE);
-			}
-		}
-	}
-
-	/**
-	 * Check if action should be enabled or disabled and update its status.
-	 */
-	public void updateStatus() {
-		WorkflowBundle workflowBundle = selectionManager
-				.getSelectedWorkflowBundle();
-		DataflowSelectionModel selectionModel = selectionManager
-				.getDataflowSelectionModel(workflowBundle);
-
-		// List of all selected objects in the graph view
-		Set<Object> selection = selectionModel.getSelection();
-
-		if (!selection.isEmpty()) {
-			// Take the first selected item - we only support single selections anyway
-			Object selected = selection.toArray()[0];
-			if ((selected instanceof Processor)
-					|| (selected instanceof InputWorkflowPort)
-					|| (selected instanceof OutputWorkflowPort)) {
-				setEnabled(true);
-				return;
-			}
-		}
-		setEnabled(false);
-	}
-
-	/**
-	 * Observes events on workflow Selection Manager, i.e. when a workflow node
-	 * is selected in the graph view, and enables/disables this action
-	 * accordingly.
-	 */
-	private final class DataflowSelectionObserver extends
-			SwingAwareObserver<DataflowSelectionMessage> {
-		@Override
-		public void notifySwing(Observable<DataflowSelectionMessage> sender,
-				DataflowSelectionMessage message) {
-			updateStatus();
-		}
-	}
-
-	private final class SelectionManagerObserver extends
-			SwingAwareObserver<SelectionManagerEvent> {
-		@Override
-		public void notifySwing(Observable<SelectionManagerEvent> sender,
-				SelectionManagerEvent message) {
-			if (!(message instanceof WorkflowBundleSelectionEvent))
-				return;
-			WorkflowBundleSelectionEvent workflowBundleSelectionEvent = (WorkflowBundleSelectionEvent) message;
-			WorkflowBundle oldFlow = workflowBundleSelectionEvent
-					.getPreviouslySelectedWorkflowBundle();
-			WorkflowBundle newFlow = workflowBundleSelectionEvent
-					.getSelectedWorkflowBundle();
-			// Update the buttons status as current dataflow has changed
-			updateStatus();
-
-			/*
-			 * Remove the workflow selection model listener from the previous
-			 * (if any) and add to the new workflow (if any)
-			 */
-			if (oldFlow != null)
-				selectionManager.getDataflowSelectionModel(oldFlow)
-						.removeObserver(workflowSelectionObserver);
-
-			if (newFlow != null)
-				selectionManager.getDataflowSelectionModel(newFlow)
-						.addObserver(workflowSelectionObserver);
-		}
-	}
-}

http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/dc466d6d/taverna-workbench-graph-view/src/main/java/net/sf/taverna/t2/workbench/views/graph/config/GraphViewConfiguration.java
----------------------------------------------------------------------
diff --git a/taverna-workbench-graph-view/src/main/java/net/sf/taverna/t2/workbench/views/graph/config/GraphViewConfiguration.java b/taverna-workbench-graph-view/src/main/java/net/sf/taverna/t2/workbench/views/graph/config/GraphViewConfiguration.java
deleted file mode 100644
index b1c3265..0000000
--- a/taverna-workbench-graph-view/src/main/java/net/sf/taverna/t2/workbench/views/graph/config/GraphViewConfiguration.java
+++ /dev/null
@@ -1,80 +0,0 @@
-/*******************************************************************************
- * Copyright (C) 2009 The University of Manchester
- *
- *  Modifications to the initial code base are copyright of their
- *  respective authors, or their employers as appropriate.
- *
- *  This program is free software; you can redistribute it and/or
- *  modify it under the terms of the GNU Lesser General Public License
- *  as published by the Free Software Foundation; either version 2.1 of
- *  the License, or (at your option) any later version.
- *
- *  This program is distributed in the hope that it will be useful, but
- *  WITHOUT ANY WARRANTY; without even the implied warranty of
- *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
- *  Lesser General Public License for more details.
- *
- *  You should have received a copy of the GNU Lesser General Public
- *  License along with this program; if not, write to the Free Software
- *  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
- ******************************************************************************/
-package net.sf.taverna.t2.workbench.views.graph.config;
-
-import java.util.HashMap;
-import java.util.Map;
-
-import uk.org.taverna.configuration.AbstractConfigurable;
-import uk.org.taverna.configuration.ConfigurationManager;
-
-import net.sf.taverna.t2.workbench.models.graph.Graph.Alignment;
-import net.sf.taverna.t2.workbench.models.graph.GraphController.PortStyle;
-
-/**
- * Configuration for the GraphViewComponent.
- * 
- * @author David Withers
- */
-public class GraphViewConfiguration extends AbstractConfigurable {
-	public static final String PORT_STYLE = "portStyle";
-	public static final String ALIGNMENT = "alignment";
-	public static final String ANIMATION_ENABLED = "animationEnabled";
-	public static final String ANIMATION_SPEED = "animationSpeed";
-
-	private Map<String, String> defaultPropertyMap;
-
-	public GraphViewConfiguration(ConfigurationManager configurationManager) {
-		super(configurationManager);
-	}
-
-	@Override
-	public String getCategory() {
-		return "general";
-	}
-
-	@Override
-	public Map<String, String> getDefaultPropertyMap() {
-		if (defaultPropertyMap == null) {
-			defaultPropertyMap = new HashMap<>();
-			defaultPropertyMap.put(PORT_STYLE, PortStyle.NONE.toString());
-			defaultPropertyMap.put(ALIGNMENT, Alignment.VERTICAL.toString());
-			defaultPropertyMap.put(ANIMATION_ENABLED, "false");
-			defaultPropertyMap.put(ANIMATION_SPEED, "800");
-		}
-		return defaultPropertyMap;
-	}
-
-	@Override
-	public String getDisplayName() {
-		return "Diagram";
-	}
-
-	@Override
-	public String getFilePrefix() {
-		return "Diagram";
-	}
-
-	@Override
-	public String getUUID() {
-		return "3686BA31-449F-4147-A8AC-0C3F63AFC68F";
-	}
-}