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Posted to github@beam.apache.org by GitBox <gi...@apache.org> on 2020/12/10 00:07:23 UTC
[GitHub] [beam] janeliulwq opened a new pull request #13516: Change the output type of FHIR Search from String to JsonArray
janeliulwq opened a new pull request #13516:
URL: https://github.com/apache/beam/pull/13516
Change the output type of FHIR Search in the FhirIO library from String to JsonArray
## R: @pabloem
------------------------
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[GitHub] [beam] pabloem commented on a change in pull request #13516: Change the output type of FHIR Search from String to JsonArray
Posted by GitBox <gi...@apache.org>.
pabloem commented on a change in pull request #13516:
URL: https://github.com/apache/beam/pull/13516#discussion_r542530282
##########
File path: sdks/java/io/google-cloud-platform/src/test/java/org/apache/beam/sdk/io/gcp/healthcare/FhirIOTest.java
##########
@@ -67,7 +68,8 @@ public void test_FhirIO_failedSearches() {
PCollection<HealthcareIOError<String>> failed = searchResult.getFailedSearches();
- PCollection<String> resources = searchResult.getResources();
+ PCollection<JsonArray> resources = searchResult.getResources();
+ resources.setCoder(JsonArrayCoder.of());
Review comment:
I recommend you set the coder from inside your `expand` function in `FhirIO.java` - that way your users will not need to set their coders manually every time.
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[GitHub] [beam] pabloem merged pull request #13516: Change the output type of FHIR Search from String to JsonArray
Posted by GitBox <gi...@apache.org>.
pabloem merged pull request #13516:
URL: https://github.com/apache/beam/pull/13516
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[GitHub] [beam] pabloem commented on pull request #13516: Change the output type of FHIR Search from String to JsonArray
Posted by GitBox <gi...@apache.org>.
pabloem commented on pull request #13516:
URL: https://github.com/apache/beam/pull/13516#issuecomment-744579731
Run Java PostCommit
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[GitHub] [beam] janeliulwq commented on pull request #13516: Change the output type of FHIR Search from String to JsonArray
Posted by GitBox <gi...@apache.org>.
janeliulwq commented on pull request #13516:
URL: https://github.com/apache/beam/pull/13516#issuecomment-744596998
Run Java PreCommit
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[GitHub] [beam] TheNeuralBit commented on pull request #13516: Change the output type of FHIR Search from String to JsonArray
Posted by GitBox <gi...@apache.org>.
TheNeuralBit commented on pull request #13516:
URL: https://github.com/apache/beam/pull/13516#issuecomment-752280186
I think this may have introduced some flakiness in testFhirIOSearch (BEAM-11539). Could you take a look @janeliulwq?
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[GitHub] [beam] janeliulwq commented on a change in pull request #13516: Change the output type of FHIR Search from String to JsonArray
Posted by GitBox <gi...@apache.org>.
janeliulwq commented on a change in pull request #13516:
URL: https://github.com/apache/beam/pull/13516#discussion_r542547104
##########
File path: sdks/java/io/google-cloud-platform/src/test/java/org/apache/beam/sdk/io/gcp/healthcare/FhirIOTest.java
##########
@@ -67,7 +68,8 @@ public void test_FhirIO_failedSearches() {
PCollection<HealthcareIOError<String>> failed = searchResult.getFailedSearches();
- PCollection<String> resources = searchResult.getResources();
+ PCollection<JsonArray> resources = searchResult.getResources();
+ resources.setCoder(JsonArrayCoder.of());
Review comment:
Thanks and done!
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[GitHub] [beam] pabloem commented on pull request #13516: Change the output type of FHIR Search from String to JsonArray
Posted by GitBox <gi...@apache.org>.
pabloem commented on pull request #13516:
URL: https://github.com/apache/beam/pull/13516#issuecomment-744643190
thanks @janeliulwq
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