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Posted to common-dev@hadoop.apache.org by "stack (JIRA)" <ji...@apache.org> on 2008/01/23 23:48:34 UTC

[jira] Created: (HADOOP-2693) [hbase] NPE in getClosestRowBefore

[hbase] NPE in getClosestRowBefore
----------------------------------

                 Key: HADOOP-2693
                 URL: https://issues.apache.org/jira/browse/HADOOP-2693
             Project: Hadoop Core
          Issue Type: Bug
          Components: contrib/hbase
            Reporter: stack


Just saw this in a load test:

{code}
2008-01-23 22:43:42,831 INFO org.apache.hadoop.ipc.Server: IPC Server handler 8 on 60020, call getClosestRowBefore(.META.,,1, TestTable,,999999999999999, 9223372036854775807) from XX.XX.XX.141:49068: error: java.io.IOException: java.lang.NullPointerException
java.io.IOException: java.lang.NullPointerException
        at org.apache.hadoop.io.Text.compareTo(Text.java:278)
        at org.apache.hadoop.hbase.HStore.getRowKeyAtOrBefore(HStore.java:1846)
        at org.apache.hadoop.hbase.HRegion.getClosestRowBefore(HRegion.java:1109)
        at org.apache.hadoop.hbase.HRegionServer.getClosestRowBefore(HRegionServer.java:1434)
        at sun.reflect.GeneratedMethodAccessor8.invoke(Unknown Source)
        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
        at java.lang.reflect.Method.invoke(Method.java:597)
        at org.apache.hadoop.hbase.ipc.HbaseRPC$Server.call(HbaseRPC.java:413)
        at org.apache.hadoop.ipc.Server$Handler.run(Server.java:908)
{code}

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[jira] Commented: (HADOOP-2693) [hbase] NPE in getClosestRowBefore

Posted by "Hadoop QA (JIRA)" <ji...@apache.org>.
    [ https://issues.apache.org/jira/browse/HADOOP-2693?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=12561968#action_12561968 ] 

Hadoop QA commented on HADOOP-2693:
-----------------------------------

-1 overall.  Here are the results of testing the latest attachment 
http://issues.apache.org/jira/secure/attachment/12373889/2693.patch
against trunk revision 614721.

    @author +1.  The patch does not contain any @author tags.

    javadoc +1.  The javadoc tool did not generate any warning messages.

    javac +1.  The applied patch does not generate any new compiler warnings.

    findbugs +1.  The patch does not introduce any new Findbugs warnings.

    core tests -1.  The patch failed core unit tests.

    contrib tests +1.  The patch passed contrib unit tests.

Test results: http://hudson.zones.apache.org/hudson/job/Hadoop-Patch/1660/testReport/
Findbugs warnings: http://hudson.zones.apache.org/hudson/job/Hadoop-Patch/1660/artifact/trunk/build/test/findbugs/newPatchFindbugsWarnings.html
Checkstyle results: http://hudson.zones.apache.org/hudson/job/Hadoop-Patch/1660/artifact/trunk/build/test/checkstyle-errors.html
Console output: http://hudson.zones.apache.org/hudson/job/Hadoop-Patch/1660/console

This message is automatically generated.

> [hbase] NPE in getClosestRowBefore
> ----------------------------------
>
>                 Key: HADOOP-2693
>                 URL: https://issues.apache.org/jira/browse/HADOOP-2693
>             Project: Hadoop Core
>          Issue Type: Bug
>          Components: contrib/hbase
>            Reporter: stack
>            Assignee: Bryan Duxbury
>         Attachments: 2693.patch
>
>
> Just saw this in a load test:
> {code}
> 2008-01-23 22:43:42,831 INFO org.apache.hadoop.ipc.Server: IPC Server handler 8 on 60020, call getClosestRowBefore(.META.,,1, TestTable,,999999999999999, 9223372036854775807) from XX.XX.XX.141:49068: error: java.io.IOException: java.lang.NullPointerException
> java.io.IOException: java.lang.NullPointerException
>         at org.apache.hadoop.io.Text.compareTo(Text.java:278)
>         at org.apache.hadoop.hbase.HStore.getRowKeyAtOrBefore(HStore.java:1846)
>         at org.apache.hadoop.hbase.HRegion.getClosestRowBefore(HRegion.java:1109)
>         at org.apache.hadoop.hbase.HRegionServer.getClosestRowBefore(HRegionServer.java:1434)
>         at sun.reflect.GeneratedMethodAccessor8.invoke(Unknown Source)
>         at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
>         at java.lang.reflect.Method.invoke(Method.java:597)
>         at org.apache.hadoop.hbase.ipc.HbaseRPC$Server.call(HbaseRPC.java:413)
>         at org.apache.hadoop.ipc.Server$Handler.run(Server.java:908)
> {code}

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[jira] Commented: (HADOOP-2693) [hbase] NPE in getClosestRowBefore

Posted by "stack (JIRA)" <ji...@apache.org>.
    [ https://issues.apache.org/jira/browse/HADOOP-2693?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=12561862#action_12561862 ] 

stack commented on HADOOP-2693:
-------------------------------

This is what it looks like client-side:
{code}
08/01/23 22:44:13 ERROR hbase.PerformanceEvaluation: Failed
java.io.IOException: java.io.IOException: java.lang.NullPointerException

        at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
        at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39)
        at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27)
        at java.lang.reflect.Constructor.newInstance(Constructor.java:513)
        at org.apache.hadoop.hbase.RemoteExceptionHandler.decodeRemoteException(RemoteExceptionHandler.java:82)
        at org.apache.hadoop.hbase.HConnectionManager$TableServers.locateRegionInMeta(HConnectionManager.java:469)
        at org.apache.hadoop.hbase.HConnectionManager$TableServers.locateRegion(HConnectionManager.java:343)
        at org.apache.hadoop.hbase.HConnectionManager$TableServers.locateRegion(HConnectionManager.java:306)
        at org.apache.hadoop.hbase.HTable.<init>(HTable.java:90)
        at org.apache.hadoop.hbase.PerformanceEvaluation$Test.testSetup(PerformanceEvaluation.java:308)
        at org.apache.hadoop.hbase.PerformanceEvaluation$Test.test(PerformanceEvaluation.java:323)
        at org.apache.hadoop.hbase.PerformanceEvaluation.runOneClient(PerformanceEvaluation.java:525)
        at org.apache.hadoop.hbase.PerformanceEvaluation.runNIsOne(PerformanceEvaluation.java:546)
        at org.apache.hadoop.hbase.PerformanceEvaluation.runTest(PerformanceEvaluation.java:568)
        at org.apache.hadoop.hbase.PerformanceEvaluation.doCommandLine(PerformanceEvaluation.java:663)
        at org.apache.hadoop.hbase.PerformanceEvaluation.main(PerformanceEvaluation.java:682)
{code}

> [hbase] NPE in getClosestRowBefore
> ----------------------------------
>
>                 Key: HADOOP-2693
>                 URL: https://issues.apache.org/jira/browse/HADOOP-2693
>             Project: Hadoop Core
>          Issue Type: Bug
>          Components: contrib/hbase
>            Reporter: stack
>
> Just saw this in a load test:
> {code}
> 2008-01-23 22:43:42,831 INFO org.apache.hadoop.ipc.Server: IPC Server handler 8 on 60020, call getClosestRowBefore(.META.,,1, TestTable,,999999999999999, 9223372036854775807) from XX.XX.XX.141:49068: error: java.io.IOException: java.lang.NullPointerException
> java.io.IOException: java.lang.NullPointerException
>         at org.apache.hadoop.io.Text.compareTo(Text.java:278)
>         at org.apache.hadoop.hbase.HStore.getRowKeyAtOrBefore(HStore.java:1846)
>         at org.apache.hadoop.hbase.HRegion.getClosestRowBefore(HRegion.java:1109)
>         at org.apache.hadoop.hbase.HRegionServer.getClosestRowBefore(HRegionServer.java:1434)
>         at sun.reflect.GeneratedMethodAccessor8.invoke(Unknown Source)
>         at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
>         at java.lang.reflect.Method.invoke(Method.java:597)
>         at org.apache.hadoop.hbase.ipc.HbaseRPC$Server.call(HbaseRPC.java:413)
>         at org.apache.hadoop.ipc.Server$Handler.run(Server.java:908)
> {code}

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[jira] Updated: (HADOOP-2693) [hbase] NPE in getClosestRowBefore

Posted by "Bryan Duxbury (JIRA)" <ji...@apache.org>.
     [ https://issues.apache.org/jira/browse/HADOOP-2693?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]

Bryan Duxbury updated HADOOP-2693:
----------------------------------

    Status: Patch Available  (was: Open)

Trying Hudson.

> [hbase] NPE in getClosestRowBefore
> ----------------------------------
>
>                 Key: HADOOP-2693
>                 URL: https://issues.apache.org/jira/browse/HADOOP-2693
>             Project: Hadoop Core
>          Issue Type: Bug
>          Components: contrib/hbase
>            Reporter: stack
>            Assignee: Bryan Duxbury
>         Attachments: 2693.patch
>
>
> Just saw this in a load test:
> {code}
> 2008-01-23 22:43:42,831 INFO org.apache.hadoop.ipc.Server: IPC Server handler 8 on 60020, call getClosestRowBefore(.META.,,1, TestTable,,999999999999999, 9223372036854775807) from XX.XX.XX.141:49068: error: java.io.IOException: java.lang.NullPointerException
> java.io.IOException: java.lang.NullPointerException
>         at org.apache.hadoop.io.Text.compareTo(Text.java:278)
>         at org.apache.hadoop.hbase.HStore.getRowKeyAtOrBefore(HStore.java:1846)
>         at org.apache.hadoop.hbase.HRegion.getClosestRowBefore(HRegion.java:1109)
>         at org.apache.hadoop.hbase.HRegionServer.getClosestRowBefore(HRegionServer.java:1434)
>         at sun.reflect.GeneratedMethodAccessor8.invoke(Unknown Source)
>         at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
>         at java.lang.reflect.Method.invoke(Method.java:597)
>         at org.apache.hadoop.hbase.ipc.HbaseRPC$Server.call(HbaseRPC.java:413)
>         at org.apache.hadoop.ipc.Server$Handler.run(Server.java:908)
> {code}

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[jira] Commented: (HADOOP-2693) [hbase] NPE in getClosestRowBefore

Posted by "Jim Kellerman (JIRA)" <ji...@apache.org>.
    [ https://issues.apache.org/jira/browse/HADOOP-2693?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=12561893#action_12561893 ] 

Jim Kellerman commented on HADOOP-2693:
---------------------------------------

Agreed that this is transitory. Also should not occur after HADOOP-2636 except after new table creation because it does not flush the cache if there are zero entries (which would create an empty MapFile)

> [hbase] NPE in getClosestRowBefore
> ----------------------------------
>
>                 Key: HADOOP-2693
>                 URL: https://issues.apache.org/jira/browse/HADOOP-2693
>             Project: Hadoop Core
>          Issue Type: Bug
>          Components: contrib/hbase
>            Reporter: stack
>            Assignee: Bryan Duxbury
>         Attachments: 2693.patch
>
>
> Just saw this in a load test:
> {code}
> 2008-01-23 22:43:42,831 INFO org.apache.hadoop.ipc.Server: IPC Server handler 8 on 60020, call getClosestRowBefore(.META.,,1, TestTable,,999999999999999, 9223372036854775807) from XX.XX.XX.141:49068: error: java.io.IOException: java.lang.NullPointerException
> java.io.IOException: java.lang.NullPointerException
>         at org.apache.hadoop.io.Text.compareTo(Text.java:278)
>         at org.apache.hadoop.hbase.HStore.getRowKeyAtOrBefore(HStore.java:1846)
>         at org.apache.hadoop.hbase.HRegion.getClosestRowBefore(HRegion.java:1109)
>         at org.apache.hadoop.hbase.HRegionServer.getClosestRowBefore(HRegionServer.java:1434)
>         at sun.reflect.GeneratedMethodAccessor8.invoke(Unknown Source)
>         at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
>         at java.lang.reflect.Method.invoke(Method.java:597)
>         at org.apache.hadoop.hbase.ipc.HbaseRPC$Server.call(HbaseRPC.java:413)
>         at org.apache.hadoop.ipc.Server$Handler.run(Server.java:908)
> {code}

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[jira] Assigned: (HADOOP-2693) [hbase] NPE in getClosestRowBefore

Posted by "Bryan Duxbury (JIRA)" <ji...@apache.org>.
     [ https://issues.apache.org/jira/browse/HADOOP-2693?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]

Bryan Duxbury reassigned HADOOP-2693:
-------------------------------------

    Assignee: Bryan Duxbury

> [hbase] NPE in getClosestRowBefore
> ----------------------------------
>
>                 Key: HADOOP-2693
>                 URL: https://issues.apache.org/jira/browse/HADOOP-2693
>             Project: Hadoop Core
>          Issue Type: Bug
>          Components: contrib/hbase
>            Reporter: stack
>            Assignee: Bryan Duxbury
>
> Just saw this in a load test:
> {code}
> 2008-01-23 22:43:42,831 INFO org.apache.hadoop.ipc.Server: IPC Server handler 8 on 60020, call getClosestRowBefore(.META.,,1, TestTable,,999999999999999, 9223372036854775807) from XX.XX.XX.141:49068: error: java.io.IOException: java.lang.NullPointerException
> java.io.IOException: java.lang.NullPointerException
>         at org.apache.hadoop.io.Text.compareTo(Text.java:278)
>         at org.apache.hadoop.hbase.HStore.getRowKeyAtOrBefore(HStore.java:1846)
>         at org.apache.hadoop.hbase.HRegion.getClosestRowBefore(HRegion.java:1109)
>         at org.apache.hadoop.hbase.HRegionServer.getClosestRowBefore(HRegionServer.java:1434)
>         at sun.reflect.GeneratedMethodAccessor8.invoke(Unknown Source)
>         at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
>         at java.lang.reflect.Method.invoke(Method.java:597)
>         at org.apache.hadoop.hbase.ipc.HbaseRPC$Server.call(HbaseRPC.java:413)
>         at org.apache.hadoop.ipc.Server$Handler.run(Server.java:908)
> {code}

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[jira] Updated: (HADOOP-2693) [hbase] NPE in getClosestRowBefore

Posted by "Bryan Duxbury (JIRA)" <ji...@apache.org>.
     [ https://issues.apache.org/jira/browse/HADOOP-2693?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]

Bryan Duxbury updated HADOOP-2693:
----------------------------------

    Attachment: 2693.patch

This patch adds a NP check before using it. I think this problem is transitory anyway, because it should only happen when a MapFile is empty, and that only happens because the flusher is over flushing. 

My tests pass locally with this patch.

> [hbase] NPE in getClosestRowBefore
> ----------------------------------
>
>                 Key: HADOOP-2693
>                 URL: https://issues.apache.org/jira/browse/HADOOP-2693
>             Project: Hadoop Core
>          Issue Type: Bug
>          Components: contrib/hbase
>            Reporter: stack
>            Assignee: Bryan Duxbury
>         Attachments: 2693.patch
>
>
> Just saw this in a load test:
> {code}
> 2008-01-23 22:43:42,831 INFO org.apache.hadoop.ipc.Server: IPC Server handler 8 on 60020, call getClosestRowBefore(.META.,,1, TestTable,,999999999999999, 9223372036854775807) from XX.XX.XX.141:49068: error: java.io.IOException: java.lang.NullPointerException
> java.io.IOException: java.lang.NullPointerException
>         at org.apache.hadoop.io.Text.compareTo(Text.java:278)
>         at org.apache.hadoop.hbase.HStore.getRowKeyAtOrBefore(HStore.java:1846)
>         at org.apache.hadoop.hbase.HRegion.getClosestRowBefore(HRegion.java:1109)
>         at org.apache.hadoop.hbase.HRegionServer.getClosestRowBefore(HRegionServer.java:1434)
>         at sun.reflect.GeneratedMethodAccessor8.invoke(Unknown Source)
>         at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
>         at java.lang.reflect.Method.invoke(Method.java:597)
>         at org.apache.hadoop.hbase.ipc.HbaseRPC$Server.call(HbaseRPC.java:413)
>         at org.apache.hadoop.ipc.Server$Handler.run(Server.java:908)
> {code}

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