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[GitHub] [spark] seayoun opened a new pull request #31645: [SPARK-34536]zstd-jni tag 1.3.2-2 lead read less shuffle data

seayoun opened a new pull request #31645:
URL: https://github.com/apache/spark/pull/31645


   zstd-jni issues:
   https://github.com/luben/zstd-jni/issues/159
   
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   Change zstd-jni version to version 1.3.2-2
   
   
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   This old zstd-jni(tag 1.3.3-2) has probability to read less data when shuffle read.
   The `ZstdInputStream` in zstd-jni(tag 1.3.3-2) maybe return 0 after a read function call, this doesn't meet the standard of `InputStream` and the `InputStream` will not return 0 unless len is 0; Spark will use a BufferedInputStream wrapped to ZstdInputStream, when ZstdInputStream read call return 0, BufferedInputStream will consider the 0 as the end of read and exit, this can lead data loss.
   
   
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[GitHub] [spark] AmplabJenkins commented on pull request #31645: [SPARK-30228][BUILD][2.4] Update zstd-jni to 1.4.4-3

Posted by GitBox <gi...@apache.org>.
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URL: https://github.com/apache/spark/pull/31645#issuecomment-786029412


   
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[GitHub] [spark] AmplabJenkins commented on pull request #31645: [SPARK-30228][BUILD][2.4] Update zstd-jni to 1.4.4-3

Posted by GitBox <gi...@apache.org>.
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URL: https://github.com/apache/spark/pull/31645#issuecomment-785934234


   
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[GitHub] [spark] cloud-fan commented on pull request #31645: [SPARK-30228][BUILD][2.4] Update zstd-jni to 1.4.4-3

Posted by GitBox <gi...@apache.org>.
cloud-fan commented on pull request #31645:
URL: https://github.com/apache/spark/pull/31645#issuecomment-785883196


   cc @srowen as well


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[GitHub] [spark] seayoun commented on pull request #31645: [SPARK-30228][BUILD][2.4] Update zstd-jni to 1.4.4-3

Posted by GitBox <gi...@apache.org>.
seayoun commented on pull request #31645:
URL: https://github.com/apache/spark/pull/31645#issuecomment-786386384


   > In the JIRA, I found the following, but the reason for the version choice is missing.
   > 
   > > So, I think it's nessary to upgrade zstd-jni version to 1.4.4-3 in spark2.4 for spark2.4 has a wide use in production.
   Another issue for ZstdInputStream. It happends in 1.4.4-3
   https://github.com/luben/zstd-jni/issues/110


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[GitHub] [spark] HyukjinKwon commented on pull request #31645: [SPARK-34536]zstd-jni tag 1.3.2-2 lead read less shuffle data

Posted by GitBox <gi...@apache.org>.
HyukjinKwon commented on pull request #31645:
URL: https://github.com/apache/spark/pull/31645#issuecomment-785821132


   cc @dongjoon-hyun FYI


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[GitHub] [spark] AmplabJenkins commented on pull request #31645: [SPARK-34536]zstd-jni tag 1.3.2-2 lead read less shuffle data

Posted by GitBox <gi...@apache.org>.
AmplabJenkins commented on pull request #31645:
URL: https://github.com/apache/spark/pull/31645#issuecomment-785789507


   Can one of the admins verify this patch?


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[GitHub] [spark] SparkQA commented on pull request #31645: [SPARK-30228][BUILD][2.4] Update zstd-jni to 1.4.4-3

Posted by GitBox <gi...@apache.org>.
SparkQA commented on pull request #31645:
URL: https://github.com/apache/spark/pull/31645#issuecomment-786011408


   **[Test build #135466 has finished](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/135466/testReport)** for PR 31645 at commit [`03990d7`](https://github.com/apache/spark/commit/03990d7bf2290a389addc6004285959eec7974d4).
    * This patch passes all tests.
    * This patch merges cleanly.
    * This patch adds no public classes.


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[GitHub] [spark] dongjoon-hyun commented on pull request #31645: [SPARK-30228][BUILD][2.4] Update zstd-jni to 1.4.4-3

Posted by GitBox <gi...@apache.org>.
dongjoon-hyun commented on pull request #31645:
URL: https://github.com/apache/spark/pull/31645#issuecomment-786129880


   Merged to branch-2.4.


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[GitHub] [spark] cloud-fan commented on pull request #31645: [SPARK-30228][BUILD][2.4] Update zstd-jni to 1.4.4-3

Posted by GitBox <gi...@apache.org>.
cloud-fan commented on pull request #31645:
URL: https://github.com/apache/spark/pull/31645#issuecomment-785875197


   ok to test


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[GitHub] [spark] seayoun commented on pull request #31645: [SPARK-30228][BUILD][2.4] Update zstd-jni to 1.4.4-3

Posted by GitBox <gi...@apache.org>.
seayoun commented on pull request #31645:
URL: https://github.com/apache/spark/pull/31645#issuecomment-785884417


   > Usually, we don't upgrade dependencies in released branches. But this is a correctness bug and I think we can make an exception here.
   
   @cloud-fan It's hard to add an exception here because it is imperceptible for spark, because spark use `BufferedInputStream` to deal with `ZstdInputStream` return 0, it's not in spark's core but the jdk.


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[GitHub] [spark] dongjoon-hyun commented on pull request #31645: [SPARK-30228][BUILD][2.4] Update zstd-jni to 1.4.4-3

Posted by GitBox <gi...@apache.org>.
dongjoon-hyun commented on pull request #31645:
URL: https://github.com/apache/spark/pull/31645#issuecomment-786402676


   Thanks, @seeyoun . You meant that another issue is fixed at 1.4.4-3, right? (Instead of `happens in 1.4.4-3`)
   > Another issue for ZstdInputStream. It happends in 1.4.4-3


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[GitHub] [spark] seayoun edited a comment on pull request #31645: [SPARK-30228][BUILD][2.4] Update zstd-jni to 1.4.4-3

Posted by GitBox <gi...@apache.org>.
seayoun edited a comment on pull request #31645:
URL: https://github.com/apache/spark/pull/31645#issuecomment-785884417


   > Usually, we don't upgrade dependencies in released branches. But this is a correctness bug and I think we can make an exception here.
   
   @cloud-fan It's hard to add an exception here because it is imperceptible for spark, spark use `BufferedInputStream` to deal with `ZstdInputStream` return 0, it's not in spark's code but the jdk.


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[GitHub] [spark] seayoun edited a comment on pull request #31645: [SPARK-30228][BUILD][2.4] Update zstd-jni to 1.4.4-3

Posted by GitBox <gi...@apache.org>.
seayoun edited a comment on pull request #31645:
URL: https://github.com/apache/spark/pull/31645#issuecomment-785884417


   > Usually, we don't upgrade dependencies in released branches. But this is a correctness bug and I think we can make an exception here.
   
   @cloud-fan It's hard to add an exception here because it is imperceptible for spark, spark use `BufferedInputStream` to deal with `ZstdInputStream` return 0, it's not in spark's core but the jdk.


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[GitHub] [spark] SparkQA commented on pull request #31645: [SPARK-30228][BUILD][2.4] Update zstd-jni to 1.4.4-3

Posted by GitBox <gi...@apache.org>.
SparkQA commented on pull request #31645:
URL: https://github.com/apache/spark/pull/31645#issuecomment-785918153


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[GitHub] [spark] SparkQA commented on pull request #31645: [SPARK-30228][BUILD][2.4] Update zstd-jni to 1.4.4-3

Posted by GitBox <gi...@apache.org>.
SparkQA commented on pull request #31645:
URL: https://github.com/apache/spark/pull/31645#issuecomment-785908602


   **[Test build #135466 has started](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/135466/testReport)** for PR 31645 at commit [`03990d7`](https://github.com/apache/spark/commit/03990d7bf2290a389addc6004285959eec7974d4).


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[GitHub] [spark] HyukjinKwon commented on pull request #31645: [SPARK-30228][BUILD][2.4] Update zstd-jni to 1.4.4-3

Posted by GitBox <gi...@apache.org>.
HyukjinKwon commented on pull request #31645:
URL: https://github.com/apache/spark/pull/31645#issuecomment-785909578


   Yeah this one is fine.
   


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[GitHub] [spark] cloud-fan commented on pull request #31645: [SPARK-30228][BUILD][2.4] Update zstd-jni to 1.4.4-3

Posted by GitBox <gi...@apache.org>.
cloud-fan commented on pull request #31645:
URL: https://github.com/apache/spark/pull/31645#issuecomment-785875027


   Usually, we don't upgrade dependencies in released branches. But this is a correctness bug and I think we can make an exception here.


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[GitHub] [spark] dongjoon-hyun closed pull request #31645: [SPARK-30228][BUILD][2.4] Update zstd-jni to 1.4.4-3

Posted by GitBox <gi...@apache.org>.
dongjoon-hyun closed pull request #31645:
URL: https://github.com/apache/spark/pull/31645


   


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[GitHub] [spark] seayoun edited a comment on pull request #31645: [SPARK-30228][BUILD][2.4] Update zstd-jni to 1.4.4-3

Posted by GitBox <gi...@apache.org>.
seayoun edited a comment on pull request #31645:
URL: https://github.com/apache/spark/pull/31645#issuecomment-786386384


   > In the JIRA, I found the following, but the reason for the version choice is missing.
   > 
   > > So, I think it's nessary to upgrade zstd-jni version to 1.4.4-3 in spark2.4 for spark2.4 has a wide use in production.
   
   Another issue for ZstdInputStream. It happends in 1.4.4-3
   https://github.com/luben/zstd-jni/issues/110


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[GitHub] [spark] srowen commented on pull request #31645: [SPARK-30228][BUILD][2.4] Update zstd-jni to 1.4.4-3

Posted by GitBox <gi...@apache.org>.
srowen commented on pull request #31645:
URL: https://github.com/apache/spark/pull/31645#issuecomment-786029864


   It could be hard to reproduce zstd returning 0 bytes before EOF. If we can we'd mostly be testing what zstd tests already - the stream just never returns 0 bytes before done. If it's pretty hard to test, I think it's OK to merge without a specific test.


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[GitHub] [spark] dongjoon-hyun commented on pull request #31645: [SPARK-30228][BUILD][2.4] Update zstd-jni to 1.4.4-3

Posted by GitBox <gi...@apache.org>.
dongjoon-hyun commented on pull request #31645:
URL: https://github.com/apache/spark/pull/31645#issuecomment-785938343


   In the JIRA, I found the following, but the reason for the version choice is missing.
   > So, I think it's nessary to upgrade zstd-jni version to 1.4.4-3 in spark2.4 for spark2.4 has a wide use in production.


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   Can one of the admins verify this patch?


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[GitHub] [spark] seayoun commented on pull request #31645: [SPARK-30228][BUILD][2.4] Update zstd-jni to 1.4.4-3

Posted by GitBox <gi...@apache.org>.
seayoun commented on pull request #31645:
URL: https://github.com/apache/spark/pull/31645#issuecomment-785882869


   > Can you also run `./dev/test-dependencies.sh --replace-manifest`?
   
   OK


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   https://amplab.cs.berkeley.edu/jenkins//job/SparkPullRequestBuilder-K8s/40047/
   


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[GitHub] [spark] seayoun removed a comment on pull request #31645: [SPARK-30228][BUILD][2.4] Update zstd-jni to 1.4.4-3

Posted by GitBox <gi...@apache.org>.
seayoun removed a comment on pull request #31645:
URL: https://github.com/apache/spark/pull/31645#issuecomment-785884417


   > Usually, we don't upgrade dependencies in released branches. But this is a correctness bug and I think we can make an exception here.
   
   @cloud-fan It's hard to add an exception here because it is imperceptible for spark, spark use `BufferedInputStream` to deal with `ZstdInputStream` return 0, it's not in spark's code but the jdk.


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