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Posted to reviews@spark.apache.org by GitBox <gi...@apache.org> on 2020/04/10 05:54:58 UTC

[GitHub] [spark] zhengruifeng commented on a change in pull request #28176: [SPARK-31301][ML] Flatten the result dataframe of tests in testChiSquare

zhengruifeng commented on a change in pull request #28176: [SPARK-31301][ML] Flatten the result dataframe of tests in testChiSquare
URL: https://github.com/apache/spark/pull/28176#discussion_r406614269
 
 

 ##########
 File path: mllib/src/main/scala/org/apache/spark/ml/stat/ChiSquareTest.scala
 ##########
 @@ -63,40 +55,47 @@ object ChiSquareTest {
    */
   @Since("2.2.0")
   def test(dataset: DataFrame, featuresCol: String, labelCol: String): DataFrame = {
-    val spark = dataset.sparkSession
-    import spark.implicits._
-
-    SchemaUtils.checkColumnType(dataset.schema, featuresCol, new VectorUDT)
-    SchemaUtils.checkNumericType(dataset.schema, labelCol)
-    val rdd = dataset.select(col(labelCol).cast("double"), col(featuresCol)).as[(Double, Vector)]
-      .rdd.map { case (label, features) => OldLabeledPoint(label, OldVectors.fromML(features)) }
-    val testResults = OldStatistics.chiSqTest(rdd)
-    val pValues = Vectors.dense(testResults.map(_.pValue))
-    val degreesOfFreedom = testResults.map(_.degreesOfFreedom)
-    val statistics = Vectors.dense(testResults.map(_.statistic))
-    spark.createDataFrame(Seq(ChiSquareResult(pValues, degreesOfFreedom, statistics)))
+    test(dataset, featuresCol, labelCol, false)
   }
 
   /**
    * @param dataset  DataFrame of categorical labels and categorical features.
    *                 Real-valued features will be treated as categorical for each distinct value.
    * @param featuresCol  Name of features column in dataset, of type `Vector` (`VectorUDT`)
    * @param labelCol  Name of label column in dataset, of any numerical type
-   * @return Array containing the SelectionTestResult for every feature against the label.
+   * @param flatten  If false, the returned DataFrame contains only a single Row, otherwise, one
+   *                 row per feature.
    */
   @Since("3.1.0")
-  def testChiSquare(
-      dataset: Dataset[_],
+  def test(
+      dataset: DataFrame,
       featuresCol: String,
-      labelCol: String): Array[SelectionTestResult] = {
-
+      labelCol: String,
+      flatten: Boolean): DataFrame = {
     SchemaUtils.checkColumnType(dataset.schema, featuresCol, new VectorUDT)
     SchemaUtils.checkNumericType(dataset.schema, labelCol)
-    val input = dataset.select(col(labelCol).cast(DoubleType), col(featuresCol)).rdd
-      .map { case Row(label: Double, features: Vector) =>
-        OldLabeledPoint(label, OldVectors.fromML(features))
-      }
-    val chiTestResult = OldStatistics.chiSqTest(input)
-    chiTestResult.map(r => new ChiSqTestResult(r.pValue, r.degreesOfFreedom, r.statistic))
+
+    val spark = dataset.sparkSession
+    import spark.implicits._
+
+    val data = dataset.select(col(labelCol).cast("double"), col(featuresCol)).rdd
+      .map { case Row(label: Double, vec: Vector) => (label, OldVectors.fromML(vec)) }
+    val resultRDD = OldChiSqTest.computeChiSquared(data)
+
+    if (flatten) {
+      resultRDD.map { case (col, (pValue, degreesOfFreedom, statistic, _)) =>
+        (col, pValue, degreesOfFreedom, statistic)
+      }.toDF("featureIndex", "pValue", "degreesOfFreedom", "statistic")
+    } else {
+      resultRDD.map { case (col, (pValue, degreesOfFreedom, statistic, _)) =>
+        (0, (col, pValue, degreesOfFreedom, statistic))
+      }.groupByKey().map { case (_, seq) =>
 
 Review comment:
   collect results in some executor instead of the driver

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