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Posted to dev@airavata.apache.org by "Raminderjeet Singh (JIRA)" <ji...@apache.org> on 2014/03/28 16:04:46 UTC
[jira] [Resolved] (AIRAVATA-489) Intermittent failures while
submitting grid jobs
[ https://issues.apache.org/jira/browse/AIRAVATA-489?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
Raminderjeet Singh resolved AIRAVATA-489.
-----------------------------------------
Resolution: Cannot Reproduce
Ranger is no longer available and i am not facing this issue with Stampede or Trestles.
> Intermittent failures while submitting grid jobs
> ------------------------------------------------
>
> Key: AIRAVATA-489
> URL: https://issues.apache.org/jira/browse/AIRAVATA-489
> Project: Airavata
> Issue Type: Bug
> Affects Versions: 0.3-INCUBATING
> Environment: Ubuntu 10.04
> JDK 1.6
> Reporter: Heshan Suriyaarachchi
>
> I'm getting an ArrayIndexOutOfBoundsException when submitting jobs to Ranger.
> This is an intermittent issue and I'm unable to reproduce it consistently.
> Following is the exception stack trace.
> 135588 [Thread-24] INFO org.apache.airavata.core.gfac.provider.utils.JobSubmissionListener - job https://gridftp1.ranger.tacc.utexas.edu:50384/16217746756200987461/17606392074284839320/ have same status: PENDING
> 195589 [Thread-24] INFO org.apache.airavata.core.gfac.provider.utils.JobSubmissionListener - job https://gridftp1.ranger.tacc.utexas.edu:50384/16217746756200987461/17606392074284839320/ have same status: PENDING
> 211085 [Thread-28] INFO org.apache.airavata.core.gfac.provider.utils.JobSubmissionListener - Status of job https://gridftp1.ranger.tacc.utexas.edu:50384/16217746756200987461/17606392074284839320/is ACTIVE
> 211191 [Thread-28] INFO org.apache.airavata.core.gfac.notification.impl.LoggingNotification - Notifier: class org.apache.airavata.core.gfac.notification.impl.LoggingNotification
> 211191 [Thread-28] INFO org.apache.airavata.core.gfac.notification.impl.LoggingNotification - -----DATA-----
> 211191 [Thread-28] INFO org.apache.airavata.core.gfac.notification.impl.LoggingNotification - Status of job https://gridftp1.ranger.tacc.utexas.edu:50384/16217746756200987461/17606392074284839320/is ACTIVE
> 211191 [Thread-28] INFO org.apache.airavata.core.gfac.notification.impl.LoggingNotification - -----END DATA-----
> 255590 [Thread-24] INFO org.apache.airavata.core.gfac.provider.utils.JobSubmissionListener - job https://gridftp1.ranger.tacc.utexas.edu:50384/16217746756200987461/17606392074284839320/ have same status: ACTIVE
> 303881 [Thread-14] INFO org.apache.airavata.wsmg.commons.storage.JdbcStorage - Problem: 0 rows affected by insert/update/delete statement.
> 315591 [Thread-24] INFO org.apache.airavata.core.gfac.provider.utils.JobSubmissionListener - job https://gridftp1.ranger.tacc.utexas.edu:50384/16217746756200987461/17606392074284839320/ have same status: ACTIVE
> 358003 [Thread-29] INFO org.apache.airavata.core.gfac.provider.utils.JobSubmissionListener - Status of job https://gridftp1.ranger.tacc.utexas.edu:50384/16217746756200987461/17606392074284839320/is DONE
> 358102 [Thread-29] INFO org.apache.airavata.core.gfac.notification.impl.LoggingNotification - Notifier: class org.apache.airavata.core.gfac.notification.impl.LoggingNotification
> 358102 [Thread-29] INFO org.apache.airavata.core.gfac.notification.impl.LoggingNotification - -----DATA-----
> 358102 [Thread-29] INFO org.apache.airavata.core.gfac.notification.impl.LoggingNotification - Status of job https://gridftp1.ranger.tacc.utexas.edu:50384/16217746756200987461/17606392074284839320/is DONE
> 358102 [Thread-29] INFO org.apache.airavata.core.gfac.notification.impl.LoggingNotification - -----END DATA-----
> 380924 [Thread-24] INFO org.apache.airavata.core.gfac.notification.impl.LoggingNotification - Notifier: class org.apache.airavata.core.gfac.notification.impl.LoggingNotification
> 380924 [Thread-24] INFO org.apache.airavata.core.gfac.notification.impl.LoggingNotification - -----DATA-----
> 380924 [Thread-24] INFO org.apache.airavata.core.gfac.notification.impl.LoggingNotification - Finish execution
> 380924 [Thread-24] INFO org.apache.airavata.core.gfac.notification.impl.LoggingNotification - -----END DATA-----
> org.globus.gsi.gssapi.GlobusGSSCredentialImpl@2bbe3d02
> 380926 [Thread-24] INFO org.apache.airavata.core.gfac.provider.impl.GramProvider - STDOUT:gsiftp://gridftp.ranger.tacc.teragrid.org:2811//scratch/01437/ogce/test/Application1_Mon_Jun_25_16_13_39_EDT_2012_30b03d4f-c6bc-4182-a6ba-32400223b591/Application1.stdout
> 380926 [Thread-24] INFO org.apache.airavata.core.gfac.provider.impl.GramProvider - STDERR:gsiftp://gridftp.ranger.tacc.teragrid.org:2811//scratch/01437/ogce/test/Application1_Mon_Jun_25_16_13_39_EDT_2012_30b03d4f-c6bc-4182-a6ba-32400223b591/Application1.stderr
> 380927 [Thread-24] INFO org.apache.airavata.core.gfac.external.GridFtp - The local temp file is /tmp/EchoService_Mon_Jun_25_16_18_54_EDT_2012_af7f3d91-2f20-4109-a164-7a2ed48cc3a93731227270041424931stdout
> 380927 [Thread-24] INFO org.apache.airavata.core.gfac.external.GridFtp - the remote file is //scratch/01437/ogce/test/Application1_Mon_Jun_25_16_13_39_EDT_2012_30b03d4f-c6bc-4182-a6ba-32400223b591/Application1.stdout
> 383815 [Thread-24] INFO org.apache.airavata.core.gfac.external.GridFtp - Download file to://scratch/01437/ogce/test/Application1_Mon_Jun_25_16_13_39_EDT_2012_30b03d4f-c6bc-4182-a6ba-32400223b591/Application1.stdout is done
> 383860 [Thread-24] INFO org.apache.airavata.core.gfac.external.GridFtp - The local temp file is /tmp/EchoService_Mon_Jun_25_16_18_54_EDT_2012_af7f3d91-2f20-4109-a164-7a2ed48cc3a97867529937455138816stderr
> 383860 [Thread-24] INFO org.apache.airavata.core.gfac.external.GridFtp - the remote file is //scratch/01437/ogce/test/Application1_Mon_Jun_25_16_13_39_EDT_2012_30b03d4f-c6bc-4182-a6ba-32400223b591/Application1.stderr
> 386656 [Thread-24] INFO org.apache.airavata.core.gfac.external.GridFtp - Download file to://scratch/01437/ogce/test/Application1_Mon_Jun_25_16_13_39_EDT_2012_30b03d4f-c6bc-4182-a6ba-32400223b591/Application1.stderr is done
> 386702 [Thread-24] ERROR org.apache.airavata.services.gfac.axis2.reciever.GFacMessageReciever - Error invoking GFac Service
> java.lang.ArrayIndexOutOfBoundsException: -20
> at java.util.ArrayList.get(ArrayList.java:324)
> at org.apache.airavata.core.gfac.provider.impl.GramProvider.readLastLinesofStdOut(GramProvider.java:509)
> at org.apache.airavata.core.gfac.provider.impl.GramProvider.processOutput(GramProvider.java:360)
> at org.apache.airavata.core.gfac.provider.AbstractProvider.execute(AbstractProvider.java:75)
> at org.apache.airavata.core.gfac.services.impl.AbstractSimpleService.execute(AbstractSimpleService.java:118)
> at org.apache.airavata.core.gfac.GfacAPI.gridJobSubmit(GfacAPI.java:136)
> at org.apache.airavata.services.gfac.axis2.reciever.GFacMessageReciever.invokeApplication(GFacMessageReciever.java:196)
> at org.apache.airavata.services.gfac.axis2.reciever.GFacMessageReciever.access$000(GFacMessageReciever.java:73)
> at org.apache.airavata.services.gfac.axis2.reciever.GFacMessageReciever$1.run(GFacMessageReciever.java:142)
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