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Posted to issues@spark.apache.org by "Cheng Lian (JIRA)" <ji...@apache.org> on 2018/07/26 06:54:00 UTC
[jira] [Created] (SPARK-24927) The hadoop-provided profile doesn't
play well with Snappy-compressed Parquet files
Cheng Lian created SPARK-24927:
----------------------------------
Summary: The hadoop-provided profile doesn't play well with Snappy-compressed Parquet files
Key: SPARK-24927
URL: https://issues.apache.org/jira/browse/SPARK-24927
Project: Spark
Issue Type: Bug
Components: Build
Affects Versions: 2.3.1, 2.3.2
Reporter: Cheng Lian
Reproduction:
{noformat}
wget https://archive.apache.org/dist/spark/spark-2.3.1/spark-2.3.1-bin-without-hadoop.tgz
wget https://archive.apache.org/dist/hadoop/core/hadoop-2.7.3/hadoop-2.7.3.tar.gz
tar xzf spark-2.3.1-bin-without-hadoop.tgz
tar xzf hadoop-2.7.3.tar.gz
export SPARK_DIST_CLASSPATH=$(hadoop-2.7.3/bin/hadoop classpath)
./spark-2.3.1-bin-without-hadoop/bin/spark-shell --master local
...
scala> spark.range(1).repartition(1).write.mode("overwrite").parquet("file:///tmp/test.parquet")
{noformat}
Exception:
{noformat}
Driver stacktrace:
at org.apache.spark.scheduler.DAGScheduler.org$apache$spark$scheduler$DAGScheduler$$failJobAndIndependentStages(DAGScheduler.scala:1602)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1590)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1589)
at scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:48)
at org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:1589)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:831)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:831)
at scala.Option.foreach(Option.scala:257)
at org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:831)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.doOnReceive(DAGScheduler.scala:1823)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:1772)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:1761)
at org.apache.spark.util.EventLoop$$anon$1.run(EventLoop.scala:48)
at org.apache.spark.scheduler.DAGScheduler.runJob(DAGScheduler.scala:642)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2034)
at org.apache.spark.sql.execution.datasources.FileFormatWriter$.write(FileFormatWriter.scala:194)
... 69 more
Caused by: org.apache.spark.SparkException: Task failed while writing rows.
at org.apache.spark.sql.execution.datasources.FileFormatWriter$.org$apache$spark$sql$execution$datasources$FileFormatWriter$$executeTask(FileFormatWriter.scala:285)
at org.apache.spark.sql.execution.datasources.FileFormatWriter$$anonfun$write$1.apply(FileFormatWriter.scala:197)
at org.apache.spark.sql.execution.datasources.FileFormatWriter$$anonfun$write$1.apply(FileFormatWriter.scala:196)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:87)
at org.apache.spark.scheduler.Task.run(Task.scala:109)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:345)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Caused by: java.lang.UnsatisfiedLinkError: org.xerial.snappy.SnappyNative.maxCompressedLength(I)I
at org.xerial.snappy.SnappyNative.maxCompressedLength(Native Method)
at org.xerial.snappy.Snappy.maxCompressedLength(Snappy.java:316)
at org.apache.parquet.hadoop.codec.SnappyCompressor.compress(SnappyCompressor.java:67)
at org.apache.hadoop.io.compress.CompressorStream.compress(CompressorStream.java:81)
at org.apache.hadoop.io.compress.CompressorStream.finish(CompressorStream.java:92)
at org.apache.parquet.hadoop.CodecFactory$BytesCompressor.compress(CodecFactory.java:112)
at org.apache.parquet.hadoop.ColumnChunkPageWriteStore$ColumnChunkPageWriter.writePage(ColumnChunkPageWriteStore.java:93)
at org.apache.parquet.column.impl.ColumnWriterV1.writePage(ColumnWriterV1.java:150)
at org.apache.parquet.column.impl.ColumnWriterV1.flush(ColumnWriterV1.java:238)
at org.apache.parquet.column.impl.ColumnWriteStoreV1.flush(ColumnWriteStoreV1.java:121)
at org.apache.parquet.hadoop.InternalParquetRecordWriter.flushRowGroupToStore(InternalParquetRecordWriter.java:167)
at org.apache.parquet.hadoop.InternalParquetRecordWriter.close(InternalParquetRecordWriter.java:109)
at org.apache.parquet.hadoop.ParquetRecordWriter.close(ParquetRecordWriter.java:163)
at org.apache.spark.sql.execution.datasources.parquet.ParquetOutputWriter.close(ParquetOutputWriter.scala:42)
at org.apache.spark.sql.execution.datasources.FileFormatWriter$SingleDirectoryWriteTask.releaseResources(FileFormatWriter.scala:405)
at org.apache.spark.sql.execution.datasources.FileFormatWriter$SingleDirectoryWriteTask.execute(FileFormatWriter.scala:396)
at org.apache.spark.sql.execution.datasources.FileFormatWriter$$anonfun$org$apache$spark$sql$execution$datasources$FileFormatWriter$$executeTask$3.apply(FileFormatWriter.scala:269)
at org.apache.spark.sql.execution.datasources.FileFormatWriter$$anonfun$org$apache$spark$sql$execution$datasources$FileFormatWriter$$executeTask$3.apply(FileFormatWriter.scala:267)
at org.apache.spark.util.Utils$.tryWithSafeFinallyAndFailureCallbacks(Utils.scala:1414)
at org.apache.spark.sql.execution.datasources.FileFormatWriter$.org$apache$spark$sql$execution$datasources$FileFormatWriter$$executeTask(FileFormatWriter.scala:272)
... 8 more
{noformat}
Root cause:
# Spark 2.3 [requires snappy-java 1.1.2.6 explicitly|https://github.com/apache/spark/blob/v2.3.1/pom.xml#L163] in the root POM.
# However, the scope of snappy-java is set to {{$\{hadoop.deps.scope}}}, which is [set to {{provided}}|https://github.com/apache/spark/blob/v2.3.1/assembly/pom.xml#L224] when the {{hadoop-provided}} profile is enabled.
Therefore, snappy-java 1.1.2.6 is not included in the pre-built {{spark-2.3.1-bin-without-hadoop.tgz}} package. Instead, snappy-java 1.0.4.1, which is bundled with Hadoop 2.3.1, is used in the reproduction above and caused the link error.
I think we can simply remove [this line|https://github.com/apache/spark/blob/v2.3.1/pom.xml#L163] to get this issue fixed.
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