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Posted to common-dev@hadoop.apache.org by Alejandro Abdelnur <tu...@cloudera.com> on 2013/10/30 23:33:26 UTC

test-patch failing with OOM errors in javah

The following is happening in builds for MAPREDUCE and YARN patches.
I've seen the failures in hadoop5 and hadoop7 machines. I've increased
Maven memory to 1GB (export MAVEN_OPTS="-Xmx1024m" in the jenkins
jobs) but still some failures persist:
https://builds.apache.org/job/PreCommit-MAPREDUCE-Build/4159/

Does anybody has an idea of what may be going on?



thx


[INFO] --- native-maven-plugin:1.0-alpha-7:javah (default) @ hadoop-common ---
[INFO] /bin/sh -c cd
/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common
&& /home/jenkins/tools/java/latest/bin/javah -d
/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/native/javah
-classpath /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/classes:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-annotations/target/classes:/home/jenkins/tools/java/jdk1.6.0_26/jre/../lib/tools.jar:/home/jenkins/.m2/repository/com/google/guava/guava/11.0.2/guava-11.0.2.jar:/home/jenkins/.m2/repository/com/google/code/findbugs/jsr305/1.3.9/jsr305-1.3.9.jar:/home/jenkins/.m2/repository/commons-cli/commons-cli/1.2/commons-cli-1.2.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-math/2.1/commons-math-2.1.jar:/home/jenkins/.m2/repository/xmlenc/xmlenc/0.52/xmlenc-0.52.jar:/home/jenkins/.m2/repository/commons-httpclient/commons-httpclient/3.1/commons-httpclient-3.1.jar:/home/jenkins/.m2/repository/commons-codec/commons-codec/1.4/commons-codec-1.4.jar:/home/jenkins/.m2/repository/commons-io/commons-io/2.1/commons-io-2.1.jar:/home/jenkins/.m2/repository/commons-net/commons-net/3.1/commons-net-3.1.jar:/home/jenkins/.m2/repository/javax/servlet/servlet-api/2.5/servlet-api-2.5.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty/6.1.26/jetty-6.1.26.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty-util/6.1.26/jetty-util-6.1.26.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-core/1.9/jersey-core-1.9.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-json/1.9/jersey-json-1.9.jar:/home/jenkins/.m2/repository/org/codehaus/jettison/jettison/1.1/jettison-1.1.jar:/home/jenkins/.m2/repository/stax/stax-api/1.0.1/stax-api-1.0.1.jar:/home/jenkins/.m2/repository/com/sun/xml/bind/jaxb-impl/2.2.3-1/jaxb-impl-2.2.3-1.jar:/home/jenkins/.m2/repository/javax/xml/bind/jaxb-api/2.2.2/jaxb-api-2.2.2.jar:/home/jenkins/.m2/repository/javax/activation/activation/1.1/activation-1.1.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-jaxrs/1.8.8/jackson-jaxrs-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-xc/1.8.8/jackson-xc-1.8.8.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-server/1.9/jersey-server-1.9.jar:/home/jenkins/.m2/repository/asm/asm/3.2/asm-3.2.jar:/home/jenkins/.m2/repository/commons-logging/commons-logging/1.1.1/commons-logging-1.1.1.jar:/home/jenkins/.m2/repository/log4j/log4j/1.2.17/log4j-1.2.17.jar:/home/jenkins/.m2/repository/net/java/dev/jets3t/jets3t/0.6.1/jets3t-0.6.1.jar:/home/jenkins/.m2/repository/commons-lang/commons-lang/2.5/commons-lang-2.5.jar:/home/jenkins/.m2/repository/commons-configuration/commons-configuration/1.6/commons-configuration-1.6.jar:/home/jenkins/.m2/repository/commons-collections/commons-collections/3.2.1/commons-collections-3.2.1.jar:/home/jenkins/.m2/repository/commons-digester/commons-digester/1.8/commons-digester-1.8.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils/1.7.0/commons-beanutils-1.7.0.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils-core/1.8.0/commons-beanutils-core-1.8.0.jar:/home/jenkins/.m2/repository/org/slf4j/slf4j-api/1.7.5/slf4j-api-1.7.5.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-core-asl/1.8.8/jackson-core-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-mapper-asl/1.8.8/jackson-mapper-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/apache/avro/avro/1.7.4/avro-1.7.4.jar:/home/jenkins/.m2/repository/com/thoughtworks/paranamer/paranamer/2.3/paranamer-2.3.jar:/home/jenkins/.m2/repository/org/xerial/snappy/snappy-java/1.0.4.1/snappy-java-1.0.4.1.jar:/home/jenkins/.m2/repository/com/google/protobuf/protobuf-java/2.5.0/protobuf-java-2.5.0.jar:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-auth/target/classes:/home/jenkins/.m2/repository/com/jcraft/jsch/0.1.42/jsch-0.1.42.jar:/home/jenkins/.m2/repository/org/apache/zookeeper/zookeeper/3.4.5/zookeeper-3.4.5.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-compress/1.4.1/commons-compress-1.4.1.jar:/home/jenkins/.m2/repository/org/tukaani/xz/1.0/xz-1.0.jar
org.apache.hadoop.io.compress.zlib.ZlibCompressor
org.apache.hadoop.io.compress.zlib.ZlibDecompressor
org.apache.hadoop.io.compress.bzip2.Bzip2Compressor
org.apache.hadoop.io.compress.bzip2.Bzip2Decompressor
org.apache.hadoop.security.JniBasedUnixGroupsMapping
org.apache.hadoop.io.nativeio.NativeIO
org.apache.hadoop.security.JniBasedUnixGroupsNetgroupMapping
org.apache.hadoop.io.compress.snappy.SnappyCompressor
org.apache.hadoop.io.compress.snappy.SnappyDecompressor
org.apache.hadoop.io.compress.lz4.Lz4Compressor
org.apache.hadoop.io.compress.lz4.Lz4Decompressor
org.apache.hadoop.util.NativeCrc32
org.apache.hadoop.net.unix.DomainSocket
Error occurred during initialization of VM
java.lang.OutOfMemoryError: unable to create new native thread



-- 
Alejandro

Re: test-patch failing with OOM errors in javah

Posted by Omkar Joshi <oj...@hortonworks.com>.
btw I am doing this on my local mac machine.. not on build machines.

Thanks,
Omkar Joshi
*Hortonworks Inc.* <http://www.hortonworks.com>


On Wed, Oct 30, 2013 at 4:47 PM, Omkar Joshi <oj...@hortonworks.com> wrote:

> yes even I do the same.. I just use this to build
>
> export _JAVA_OPTIONS="-Djava.awt.headless=true -Xmx2048m -Xms2048m"
> mvn clean install package -Pdist -Dtar -DskipTests
> -Dmaven.javadoc.skip=true
>
>
> Thanks,
> Omkar Joshi
> *Hortonworks Inc.* <http://www.hortonworks.com>
>
>
> On Wed, Oct 30, 2013 at 3:39 PM, Roman Shaposhnik <rv...@apache.org> wrote:
>
>> I can take a look sometime later today. Meantime I can only
>> say that I've been running into 1Gb limit in a few builds as
>> of late. These days -- I just go with 2G by default.
>>
>> Thanks,
>> Roman.
>>
>> On Wed, Oct 30, 2013 at 3:33 PM, Alejandro Abdelnur <tu...@cloudera.com>
>> wrote:
>> > The following is happening in builds for MAPREDUCE and YARN patches.
>> > I've seen the failures in hadoop5 and hadoop7 machines. I've increased
>> > Maven memory to 1GB (export MAVEN_OPTS="-Xmx1024m" in the jenkins
>> > jobs) but still some failures persist:
>> > https://builds.apache.org/job/PreCommit-MAPREDUCE-Build/4159/
>> >
>> > Does anybody has an idea of what may be going on?
>> >
>> >
>> >
>> > thx
>> >
>> >
>> > [INFO] --- native-maven-plugin:1.0-alpha-7:javah (default) @
>> hadoop-common ---
>> > [INFO] /bin/sh -c cd
>> >
>> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common
>> > && /home/jenkins/tools/java/latest/bin/javah -d
>> >
>> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/native/javah
>> > -classpath
>> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/classes:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-annotations/target/classes:/home/jenkins/tools/java/jdk1.6.0_26/jre/../lib/tools.jar:/home/jenkins/.m2/repository/com/google/guava/guava/11.0.2/guava-11.0.2.jar:/home/jenkins/.m2/repository/com/google/code/findbugs/jsr305/1.3.9/jsr305-1.3.9.jar:/home/jenkins/.m2/repository/commons-cli/commons-cli/1.2/commons-cli-1.2.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-math/2.1/commons-math-2.1.jar:/home/jenkins/.m2/repository/xmlenc/xmlenc/0.52/xmlenc-0.52.jar:/home/jenkins/.m2/repository/commons-httpclient/commons-httpclient/3.1/commons-httpclient-3.1.jar:/home/jenkins/.m2/repository/commons-codec/commons-codec/1.4/commons-codec-1.4.jar:/home/jenkins/.m2/repository/commons-io/commons-io/2.1/commons-io-2.1.jar:/home/jenkins/.m2/repository/commons-net/commons-net/3.1/commons-net-3.1.jar:/home/jenkins/.m2/repository/javax/servlet/servlet-api/2.5/servlet-api-2.5.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty/6.1.26/jetty-6.1.26.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty-util/6.1.26/jetty-util-6.1.26.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-core/1.9/jersey-core-1.9.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-json/1.9/jersey-json-1.9.jar:/home/jenkins/.m2/repository/org/codehaus/jettison/jettison/1.1/jettison-1.1.jar:/home/jenkins/.m2/repository/stax/stax-api/1.0.1/stax-api-1.0.1.jar:/home/jenkins/.m2/repository/com/sun/xml/bind/jaxb-impl/2.2.3-1/jaxb-impl-2.2.3-1.jar:/home/jenkins/.m2/repository/javax/xml/bind/jaxb-api/2.2.2/jaxb-api-2.2.2.jar:/home/jenkins/.m2/repository/javax/activation/activation/1.1/activation-1.1.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-jaxrs/1.8.8/jackson-jaxrs-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-xc/1.8.8/jackson-xc-1.8.8.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-server/1.9/jersey-server-1.9.jar:/home/jenkins/.m2/repository/asm/asm/3.2/asm-3.2.jar:/home/jenkins/.m2/repository/commons-logging/commons-logging/1.1.1/commons-logging-1.1.1.jar:/home/jenkins/.m2/repository/log4j/log4j/1.2.17/log4j-1.2.17.jar:/home/jenkins/.m2/repository/net/java/dev/jets3t/jets3t/0.6.1/jets3t-0.6.1.jar:/home/jenkins/.m2/repository/commons-lang/commons-lang/2.5/commons-lang-2.5.jar:/home/jenkins/.m2/repository/commons-configuration/commons-configuration/1.6/commons-configuration-1.6.jar:/home/jenkins/.m2/repository/commons-collections/commons-collections/3.2.1/commons-collections-3.2.1.jar:/home/jenkins/.m2/repository/commons-digester/commons-digester/1.8/commons-digester-1.8.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils/1.7.0/commons-beanutils-1.7.0.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils-core/1.8.0/commons-beanutils-core-1.8.0.jar:/home/jenkins/.m2/repository/org/slf4j/slf4j-api/1.7.5/slf4j-api-1.7.5.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-core-asl/1.8.8/jackson-core-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-mapper-asl/1.8.8/jackson-mapper-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/apache/avro/avro/1.7.4/avro-1.7.4.jar:/home/jenkins/.m2/repository/com/thoughtworks/paranamer/paranamer/2.3/paranamer-2.3.jar:/home/jenkins/.m2/repository/org/xerial/snappy/snappy-java/
>> 1.0.4.1/snappy-java-1.0.4.1.jar:/home/jenkins/.m2/repository/com/google/protobuf/protobuf-java/2.5.0/protobuf-java-2.5.0.jar:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-auth/target/classes:/home/jenkins/.m2/repository/com/jcraft/jsch/0.1.42/jsch-0.1.42.jar:/home/jenkins/.m2/repository/org/apache/zookeeper/zookeeper/3.4.5/zookeeper-3.4.5.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-compress/1.4.1/commons-compress-1.4.1.jar:/home/jenkins/.m2/repository/org/tukaani/xz/1.0/xz-1.0.jar
>> > org.apache.hadoop.io.compress.zlib.ZlibCompressor
>> > org.apache.hadoop.io.compress.zlib.ZlibDecompressor
>> > org.apache.hadoop.io.compress.bzip2.Bzip2Compressor
>> > org.apache.hadoop.io.compress.bzip2.Bzip2Decompressor
>> > org.apache.hadoop.security.JniBasedUnixGroupsMapping
>> > org.apache.hadoop.io.nativeio.NativeIO
>> > org.apache.hadoop.security.JniBasedUnixGroupsNetgroupMapping
>> > org.apache.hadoop.io.compress.snappy.SnappyCompressor
>> > org.apache.hadoop.io.compress.snappy.SnappyDecompressor
>> > org.apache.hadoop.io.compress.lz4.Lz4Compressor
>> > org.apache.hadoop.io.compress.lz4.Lz4Decompressor
>> > org.apache.hadoop.util.NativeCrc32
>> > org.apache.hadoop.net.unix.DomainSocket
>> > Error occurred during initialization of VM
>> > java.lang.OutOfMemoryError: unable to create new native thread
>> >
>> >
>> >
>> > --
>> > Alejandro
>>
>
>

-- 
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Re: test-patch failing with OOM errors in javah

Posted by Omkar Joshi <oj...@hortonworks.com>.
btw I am doing this on my local mac machine.. not on build machines.

Thanks,
Omkar Joshi
*Hortonworks Inc.* <http://www.hortonworks.com>


On Wed, Oct 30, 2013 at 4:47 PM, Omkar Joshi <oj...@hortonworks.com> wrote:

> yes even I do the same.. I just use this to build
>
> export _JAVA_OPTIONS="-Djava.awt.headless=true -Xmx2048m -Xms2048m"
> mvn clean install package -Pdist -Dtar -DskipTests
> -Dmaven.javadoc.skip=true
>
>
> Thanks,
> Omkar Joshi
> *Hortonworks Inc.* <http://www.hortonworks.com>
>
>
> On Wed, Oct 30, 2013 at 3:39 PM, Roman Shaposhnik <rv...@apache.org> wrote:
>
>> I can take a look sometime later today. Meantime I can only
>> say that I've been running into 1Gb limit in a few builds as
>> of late. These days -- I just go with 2G by default.
>>
>> Thanks,
>> Roman.
>>
>> On Wed, Oct 30, 2013 at 3:33 PM, Alejandro Abdelnur <tu...@cloudera.com>
>> wrote:
>> > The following is happening in builds for MAPREDUCE and YARN patches.
>> > I've seen the failures in hadoop5 and hadoop7 machines. I've increased
>> > Maven memory to 1GB (export MAVEN_OPTS="-Xmx1024m" in the jenkins
>> > jobs) but still some failures persist:
>> > https://builds.apache.org/job/PreCommit-MAPREDUCE-Build/4159/
>> >
>> > Does anybody has an idea of what may be going on?
>> >
>> >
>> >
>> > thx
>> >
>> >
>> > [INFO] --- native-maven-plugin:1.0-alpha-7:javah (default) @
>> hadoop-common ---
>> > [INFO] /bin/sh -c cd
>> >
>> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common
>> > && /home/jenkins/tools/java/latest/bin/javah -d
>> >
>> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/native/javah
>> > -classpath
>> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/classes:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-annotations/target/classes:/home/jenkins/tools/java/jdk1.6.0_26/jre/../lib/tools.jar:/home/jenkins/.m2/repository/com/google/guava/guava/11.0.2/guava-11.0.2.jar:/home/jenkins/.m2/repository/com/google/code/findbugs/jsr305/1.3.9/jsr305-1.3.9.jar:/home/jenkins/.m2/repository/commons-cli/commons-cli/1.2/commons-cli-1.2.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-math/2.1/commons-math-2.1.jar:/home/jenkins/.m2/repository/xmlenc/xmlenc/0.52/xmlenc-0.52.jar:/home/jenkins/.m2/repository/commons-httpclient/commons-httpclient/3.1/commons-httpclient-3.1.jar:/home/jenkins/.m2/repository/commons-codec/commons-codec/1.4/commons-codec-1.4.jar:/home/jenkins/.m2/repository/commons-io/commons-io/2.1/commons-io-2.1.jar:/home/jenkins/.m2/repository/commons-net/commons-net/3.1/commons-net-3.1.jar:/home/jenkins/.m2/repository/javax/servlet/servlet-api/2.5/servlet-api-2.5.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty/6.1.26/jetty-6.1.26.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty-util/6.1.26/jetty-util-6.1.26.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-core/1.9/jersey-core-1.9.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-json/1.9/jersey-json-1.9.jar:/home/jenkins/.m2/repository/org/codehaus/jettison/jettison/1.1/jettison-1.1.jar:/home/jenkins/.m2/repository/stax/stax-api/1.0.1/stax-api-1.0.1.jar:/home/jenkins/.m2/repository/com/sun/xml/bind/jaxb-impl/2.2.3-1/jaxb-impl-2.2.3-1.jar:/home/jenkins/.m2/repository/javax/xml/bind/jaxb-api/2.2.2/jaxb-api-2.2.2.jar:/home/jenkins/.m2/repository/javax/activation/activation/1.1/activation-1.1.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-jaxrs/1.8.8/jackson-jaxrs-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-xc/1.8.8/jackson-xc-1.8.8.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-server/1.9/jersey-server-1.9.jar:/home/jenkins/.m2/repository/asm/asm/3.2/asm-3.2.jar:/home/jenkins/.m2/repository/commons-logging/commons-logging/1.1.1/commons-logging-1.1.1.jar:/home/jenkins/.m2/repository/log4j/log4j/1.2.17/log4j-1.2.17.jar:/home/jenkins/.m2/repository/net/java/dev/jets3t/jets3t/0.6.1/jets3t-0.6.1.jar:/home/jenkins/.m2/repository/commons-lang/commons-lang/2.5/commons-lang-2.5.jar:/home/jenkins/.m2/repository/commons-configuration/commons-configuration/1.6/commons-configuration-1.6.jar:/home/jenkins/.m2/repository/commons-collections/commons-collections/3.2.1/commons-collections-3.2.1.jar:/home/jenkins/.m2/repository/commons-digester/commons-digester/1.8/commons-digester-1.8.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils/1.7.0/commons-beanutils-1.7.0.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils-core/1.8.0/commons-beanutils-core-1.8.0.jar:/home/jenkins/.m2/repository/org/slf4j/slf4j-api/1.7.5/slf4j-api-1.7.5.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-core-asl/1.8.8/jackson-core-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-mapper-asl/1.8.8/jackson-mapper-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/apache/avro/avro/1.7.4/avro-1.7.4.jar:/home/jenkins/.m2/repository/com/thoughtworks/paranamer/paranamer/2.3/paranamer-2.3.jar:/home/jenkins/.m2/repository/org/xerial/snappy/snappy-java/
>> 1.0.4.1/snappy-java-1.0.4.1.jar:/home/jenkins/.m2/repository/com/google/protobuf/protobuf-java/2.5.0/protobuf-java-2.5.0.jar:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-auth/target/classes:/home/jenkins/.m2/repository/com/jcraft/jsch/0.1.42/jsch-0.1.42.jar:/home/jenkins/.m2/repository/org/apache/zookeeper/zookeeper/3.4.5/zookeeper-3.4.5.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-compress/1.4.1/commons-compress-1.4.1.jar:/home/jenkins/.m2/repository/org/tukaani/xz/1.0/xz-1.0.jar
>> > org.apache.hadoop.io.compress.zlib.ZlibCompressor
>> > org.apache.hadoop.io.compress.zlib.ZlibDecompressor
>> > org.apache.hadoop.io.compress.bzip2.Bzip2Compressor
>> > org.apache.hadoop.io.compress.bzip2.Bzip2Decompressor
>> > org.apache.hadoop.security.JniBasedUnixGroupsMapping
>> > org.apache.hadoop.io.nativeio.NativeIO
>> > org.apache.hadoop.security.JniBasedUnixGroupsNetgroupMapping
>> > org.apache.hadoop.io.compress.snappy.SnappyCompressor
>> > org.apache.hadoop.io.compress.snappy.SnappyDecompressor
>> > org.apache.hadoop.io.compress.lz4.Lz4Compressor
>> > org.apache.hadoop.io.compress.lz4.Lz4Decompressor
>> > org.apache.hadoop.util.NativeCrc32
>> > org.apache.hadoop.net.unix.DomainSocket
>> > Error occurred during initialization of VM
>> > java.lang.OutOfMemoryError: unable to create new native thread
>> >
>> >
>> >
>> > --
>> > Alejandro
>>
>
>

-- 
CONFIDENTIALITY NOTICE
NOTICE: This message is intended for the use of the individual or entity to 
which it is addressed and may contain information that is confidential, 
privileged and exempt from disclosure under applicable law. If the reader 
of this message is not the intended recipient, you are hereby notified that 
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Re: test-patch failing with OOM errors in javah

Posted by Omkar Joshi <oj...@hortonworks.com>.
btw I am doing this on my local mac machine.. not on build machines.

Thanks,
Omkar Joshi
*Hortonworks Inc.* <http://www.hortonworks.com>


On Wed, Oct 30, 2013 at 4:47 PM, Omkar Joshi <oj...@hortonworks.com> wrote:

> yes even I do the same.. I just use this to build
>
> export _JAVA_OPTIONS="-Djava.awt.headless=true -Xmx2048m -Xms2048m"
> mvn clean install package -Pdist -Dtar -DskipTests
> -Dmaven.javadoc.skip=true
>
>
> Thanks,
> Omkar Joshi
> *Hortonworks Inc.* <http://www.hortonworks.com>
>
>
> On Wed, Oct 30, 2013 at 3:39 PM, Roman Shaposhnik <rv...@apache.org> wrote:
>
>> I can take a look sometime later today. Meantime I can only
>> say that I've been running into 1Gb limit in a few builds as
>> of late. These days -- I just go with 2G by default.
>>
>> Thanks,
>> Roman.
>>
>> On Wed, Oct 30, 2013 at 3:33 PM, Alejandro Abdelnur <tu...@cloudera.com>
>> wrote:
>> > The following is happening in builds for MAPREDUCE and YARN patches.
>> > I've seen the failures in hadoop5 and hadoop7 machines. I've increased
>> > Maven memory to 1GB (export MAVEN_OPTS="-Xmx1024m" in the jenkins
>> > jobs) but still some failures persist:
>> > https://builds.apache.org/job/PreCommit-MAPREDUCE-Build/4159/
>> >
>> > Does anybody has an idea of what may be going on?
>> >
>> >
>> >
>> > thx
>> >
>> >
>> > [INFO] --- native-maven-plugin:1.0-alpha-7:javah (default) @
>> hadoop-common ---
>> > [INFO] /bin/sh -c cd
>> >
>> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common
>> > && /home/jenkins/tools/java/latest/bin/javah -d
>> >
>> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/native/javah
>> > -classpath
>> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/classes:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-annotations/target/classes:/home/jenkins/tools/java/jdk1.6.0_26/jre/../lib/tools.jar:/home/jenkins/.m2/repository/com/google/guava/guava/11.0.2/guava-11.0.2.jar:/home/jenkins/.m2/repository/com/google/code/findbugs/jsr305/1.3.9/jsr305-1.3.9.jar:/home/jenkins/.m2/repository/commons-cli/commons-cli/1.2/commons-cli-1.2.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-math/2.1/commons-math-2.1.jar:/home/jenkins/.m2/repository/xmlenc/xmlenc/0.52/xmlenc-0.52.jar:/home/jenkins/.m2/repository/commons-httpclient/commons-httpclient/3.1/commons-httpclient-3.1.jar:/home/jenkins/.m2/repository/commons-codec/commons-codec/1.4/commons-codec-1.4.jar:/home/jenkins/.m2/repository/commons-io/commons-io/2.1/commons-io-2.1.jar:/home/jenkins/.m2/repository/commons-net/commons-net/3.1/commons-net-3.1.jar:/home/jenkins/.m2/repository/javax/servlet/servlet-api/2.5/servlet-api-2.5.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty/6.1.26/jetty-6.1.26.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty-util/6.1.26/jetty-util-6.1.26.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-core/1.9/jersey-core-1.9.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-json/1.9/jersey-json-1.9.jar:/home/jenkins/.m2/repository/org/codehaus/jettison/jettison/1.1/jettison-1.1.jar:/home/jenkins/.m2/repository/stax/stax-api/1.0.1/stax-api-1.0.1.jar:/home/jenkins/.m2/repository/com/sun/xml/bind/jaxb-impl/2.2.3-1/jaxb-impl-2.2.3-1.jar:/home/jenkins/.m2/repository/javax/xml/bind/jaxb-api/2.2.2/jaxb-api-2.2.2.jar:/home/jenkins/.m2/repository/javax/activation/activation/1.1/activation-1.1.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-jaxrs/1.8.8/jackson-jaxrs-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-xc/1.8.8/jackson-xc-1.8.8.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-server/1.9/jersey-server-1.9.jar:/home/jenkins/.m2/repository/asm/asm/3.2/asm-3.2.jar:/home/jenkins/.m2/repository/commons-logging/commons-logging/1.1.1/commons-logging-1.1.1.jar:/home/jenkins/.m2/repository/log4j/log4j/1.2.17/log4j-1.2.17.jar:/home/jenkins/.m2/repository/net/java/dev/jets3t/jets3t/0.6.1/jets3t-0.6.1.jar:/home/jenkins/.m2/repository/commons-lang/commons-lang/2.5/commons-lang-2.5.jar:/home/jenkins/.m2/repository/commons-configuration/commons-configuration/1.6/commons-configuration-1.6.jar:/home/jenkins/.m2/repository/commons-collections/commons-collections/3.2.1/commons-collections-3.2.1.jar:/home/jenkins/.m2/repository/commons-digester/commons-digester/1.8/commons-digester-1.8.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils/1.7.0/commons-beanutils-1.7.0.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils-core/1.8.0/commons-beanutils-core-1.8.0.jar:/home/jenkins/.m2/repository/org/slf4j/slf4j-api/1.7.5/slf4j-api-1.7.5.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-core-asl/1.8.8/jackson-core-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-mapper-asl/1.8.8/jackson-mapper-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/apache/avro/avro/1.7.4/avro-1.7.4.jar:/home/jenkins/.m2/repository/com/thoughtworks/paranamer/paranamer/2.3/paranamer-2.3.jar:/home/jenkins/.m2/repository/org/xerial/snappy/snappy-java/
>> 1.0.4.1/snappy-java-1.0.4.1.jar:/home/jenkins/.m2/repository/com/google/protobuf/protobuf-java/2.5.0/protobuf-java-2.5.0.jar:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-auth/target/classes:/home/jenkins/.m2/repository/com/jcraft/jsch/0.1.42/jsch-0.1.42.jar:/home/jenkins/.m2/repository/org/apache/zookeeper/zookeeper/3.4.5/zookeeper-3.4.5.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-compress/1.4.1/commons-compress-1.4.1.jar:/home/jenkins/.m2/repository/org/tukaani/xz/1.0/xz-1.0.jar
>> > org.apache.hadoop.io.compress.zlib.ZlibCompressor
>> > org.apache.hadoop.io.compress.zlib.ZlibDecompressor
>> > org.apache.hadoop.io.compress.bzip2.Bzip2Compressor
>> > org.apache.hadoop.io.compress.bzip2.Bzip2Decompressor
>> > org.apache.hadoop.security.JniBasedUnixGroupsMapping
>> > org.apache.hadoop.io.nativeio.NativeIO
>> > org.apache.hadoop.security.JniBasedUnixGroupsNetgroupMapping
>> > org.apache.hadoop.io.compress.snappy.SnappyCompressor
>> > org.apache.hadoop.io.compress.snappy.SnappyDecompressor
>> > org.apache.hadoop.io.compress.lz4.Lz4Compressor
>> > org.apache.hadoop.io.compress.lz4.Lz4Decompressor
>> > org.apache.hadoop.util.NativeCrc32
>> > org.apache.hadoop.net.unix.DomainSocket
>> > Error occurred during initialization of VM
>> > java.lang.OutOfMemoryError: unable to create new native thread
>> >
>> >
>> >
>> > --
>> > Alejandro
>>
>
>

-- 
CONFIDENTIALITY NOTICE
NOTICE: This message is intended for the use of the individual or entity to 
which it is addressed and may contain information that is confidential, 
privileged and exempt from disclosure under applicable law. If the reader 
of this message is not the intended recipient, you are hereby notified that 
any printing, copying, dissemination, distribution, disclosure or 
forwarding of this communication is strictly prohibited. If you have 
received this communication in error, please contact the sender immediately 
and delete it from your system. Thank You.

Re: test-patch failing with OOM errors in javah

Posted by Omkar Joshi <oj...@hortonworks.com>.
yes even I do the same.. I just use this to build

export _JAVA_OPTIONS="-Djava.awt.headless=true -Xmx2048m -Xms2048m"
mvn clean install package -Pdist -Dtar -DskipTests -Dmaven.javadoc.skip=true


Thanks,
Omkar Joshi
*Hortonworks Inc.* <http://www.hortonworks.com>


On Wed, Oct 30, 2013 at 3:39 PM, Roman Shaposhnik <rv...@apache.org> wrote:

> I can take a look sometime later today. Meantime I can only
> say that I've been running into 1Gb limit in a few builds as
> of late. These days -- I just go with 2G by default.
>
> Thanks,
> Roman.
>
> On Wed, Oct 30, 2013 at 3:33 PM, Alejandro Abdelnur <tu...@cloudera.com>
> wrote:
> > The following is happening in builds for MAPREDUCE and YARN patches.
> > I've seen the failures in hadoop5 and hadoop7 machines. I've increased
> > Maven memory to 1GB (export MAVEN_OPTS="-Xmx1024m" in the jenkins
> > jobs) but still some failures persist:
> > https://builds.apache.org/job/PreCommit-MAPREDUCE-Build/4159/
> >
> > Does anybody has an idea of what may be going on?
> >
> >
> >
> > thx
> >
> >
> > [INFO] --- native-maven-plugin:1.0-alpha-7:javah (default) @
> hadoop-common ---
> > [INFO] /bin/sh -c cd
> >
> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common
> > && /home/jenkins/tools/java/latest/bin/javah -d
> >
> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/native/javah
> > -classpath
> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/classes:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-annotations/target/classes:/home/jenkins/tools/java/jdk1.6.0_26/jre/../lib/tools.jar:/home/jenkins/.m2/repository/com/google/guava/guava/11.0.2/guava-11.0.2.jar:/home/jenkins/.m2/repository/com/google/code/findbugs/jsr305/1.3.9/jsr305-1.3.9.jar:/home/jenkins/.m2/repository/commons-cli/commons-cli/1.2/commons-cli-1.2.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-math/2.1/commons-math-2.1.jar:/home/jenkins/.m2/repository/xmlenc/xmlenc/0.52/xmlenc-0.52.jar:/home/jenkins/.m2/repository/commons-httpclient/commons-httpclient/3.1/commons-httpclient-3.1.jar:/home/jenkins/.m2/repository/commons-codec/commons-codec/1.4/commons-codec-1.4.jar:/home/jenkins/.m2/repository/commons-io/commons-io/2.1/commons-io-2.1.jar:/home/jenkins/.m2/repository/commons-net/commons-net/3.1/commons-net-3.1.jar:/home/jenkins/.m2/repository/javax/servlet/servlet-api/2.5/servlet-api-2.5.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty/6.1.26/jetty-6.1.26.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty-util/6.1.26/jetty-util-6.1.26.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-core/1.9/jersey-core-1.9.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-json/1.9/jersey-json-1.9.jar:/home/jenkins/.m2/repository/org/codehaus/jettison/jettison/1.1/jettison-1.1.jar:/home/jenkins/.m2/repository/stax/stax-api/1.0.1/stax-api-1.0.1.jar:/home/jenkins/.m2/repository/com/sun/xml/bind/jaxb-impl/2.2.3-1/jaxb-impl-2.2.3-1.jar:/home/jenkins/.m2/repository/javax/xml/bind/jaxb-api/2.2.2/jaxb-api-2.2.2.jar:/home/jenkins/.m2/repository/javax/activation/activation/1.1/activation-1.1.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-jaxrs/1.8.8/jackson-jaxrs-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-xc/1.8.8/jackson-xc-1.8.8.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-server/1.9/jersey-server-1.9.jar:/home/jenkins/.m2/repository/asm/asm/3.2/asm-3.2.jar:/home/jenkins/.m2/repository/commons-logging/commons-logging/1.1.1/commons-logging-1.1.1.jar:/home/jenkins/.m2/repository/log4j/log4j/1.2.17/log4j-1.2.17.jar:/home/jenkins/.m2/repository/net/java/dev/jets3t/jets3t/0.6.1/jets3t-0.6.1.jar:/home/jenkins/.m2/repository/commons-lang/commons-lang/2.5/commons-lang-2.5.jar:/home/jenkins/.m2/repository/commons-configuration/commons-configuration/1.6/commons-configuration-1.6.jar:/home/jenkins/.m2/repository/commons-collections/commons-collections/3.2.1/commons-collections-3.2.1.jar:/home/jenkins/.m2/repository/commons-digester/commons-digester/1.8/commons-digester-1.8.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils/1.7.0/commons-beanutils-1.7.0.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils-core/1.8.0/commons-beanutils-core-1.8.0.jar:/home/jenkins/.m2/repository/org/slf4j/slf4j-api/1.7.5/slf4j-api-1.7.5.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-core-asl/1.8.8/jackson-core-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-mapper-asl/1.8.8/jackson-mapper-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/apache/avro/avro/1.7.4/avro-1.7.4.jar:/home/jenkins/.m2/repository/com/thoughtworks/paranamer/paranamer/2.3/paranamer-2.3.jar:/home/jenkins/.m2/repository/org/xerial/snappy/snappy-java/
> 1.0.4.1/snappy-java-1.0.4.1.jar:/home/jenkins/.m2/repository/com/google/protobuf/protobuf-java/2.5.0/protobuf-java-2.5.0.jar:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-auth/target/classes:/home/jenkins/.m2/repository/com/jcraft/jsch/0.1.42/jsch-0.1.42.jar:/home/jenkins/.m2/repository/org/apache/zookeeper/zookeeper/3.4.5/zookeeper-3.4.5.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-compress/1.4.1/commons-compress-1.4.1.jar:/home/jenkins/.m2/repository/org/tukaani/xz/1.0/xz-1.0.jar
> > org.apache.hadoop.io.compress.zlib.ZlibCompressor
> > org.apache.hadoop.io.compress.zlib.ZlibDecompressor
> > org.apache.hadoop.io.compress.bzip2.Bzip2Compressor
> > org.apache.hadoop.io.compress.bzip2.Bzip2Decompressor
> > org.apache.hadoop.security.JniBasedUnixGroupsMapping
> > org.apache.hadoop.io.nativeio.NativeIO
> > org.apache.hadoop.security.JniBasedUnixGroupsNetgroupMapping
> > org.apache.hadoop.io.compress.snappy.SnappyCompressor
> > org.apache.hadoop.io.compress.snappy.SnappyDecompressor
> > org.apache.hadoop.io.compress.lz4.Lz4Compressor
> > org.apache.hadoop.io.compress.lz4.Lz4Decompressor
> > org.apache.hadoop.util.NativeCrc32
> > org.apache.hadoop.net.unix.DomainSocket
> > Error occurred during initialization of VM
> > java.lang.OutOfMemoryError: unable to create new native thread
> >
> >
> >
> > --
> > Alejandro
>

-- 
CONFIDENTIALITY NOTICE
NOTICE: This message is intended for the use of the individual or entity to 
which it is addressed and may contain information that is confidential, 
privileged and exempt from disclosure under applicable law. If the reader 
of this message is not the intended recipient, you are hereby notified that 
any printing, copying, dissemination, distribution, disclosure or 
forwarding of this communication is strictly prohibited. If you have 
received this communication in error, please contact the sender immediately 
and delete it from your system. Thank You.

Re: test-patch failing with OOM errors in javah

Posted by Omkar Joshi <oj...@hortonworks.com>.
yes even I do the same.. I just use this to build

export _JAVA_OPTIONS="-Djava.awt.headless=true -Xmx2048m -Xms2048m"
mvn clean install package -Pdist -Dtar -DskipTests -Dmaven.javadoc.skip=true


Thanks,
Omkar Joshi
*Hortonworks Inc.* <http://www.hortonworks.com>


On Wed, Oct 30, 2013 at 3:39 PM, Roman Shaposhnik <rv...@apache.org> wrote:

> I can take a look sometime later today. Meantime I can only
> say that I've been running into 1Gb limit in a few builds as
> of late. These days -- I just go with 2G by default.
>
> Thanks,
> Roman.
>
> On Wed, Oct 30, 2013 at 3:33 PM, Alejandro Abdelnur <tu...@cloudera.com>
> wrote:
> > The following is happening in builds for MAPREDUCE and YARN patches.
> > I've seen the failures in hadoop5 and hadoop7 machines. I've increased
> > Maven memory to 1GB (export MAVEN_OPTS="-Xmx1024m" in the jenkins
> > jobs) but still some failures persist:
> > https://builds.apache.org/job/PreCommit-MAPREDUCE-Build/4159/
> >
> > Does anybody has an idea of what may be going on?
> >
> >
> >
> > thx
> >
> >
> > [INFO] --- native-maven-plugin:1.0-alpha-7:javah (default) @
> hadoop-common ---
> > [INFO] /bin/sh -c cd
> >
> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common
> > && /home/jenkins/tools/java/latest/bin/javah -d
> >
> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/native/javah
> > -classpath
> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/classes:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-annotations/target/classes:/home/jenkins/tools/java/jdk1.6.0_26/jre/../lib/tools.jar:/home/jenkins/.m2/repository/com/google/guava/guava/11.0.2/guava-11.0.2.jar:/home/jenkins/.m2/repository/com/google/code/findbugs/jsr305/1.3.9/jsr305-1.3.9.jar:/home/jenkins/.m2/repository/commons-cli/commons-cli/1.2/commons-cli-1.2.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-math/2.1/commons-math-2.1.jar:/home/jenkins/.m2/repository/xmlenc/xmlenc/0.52/xmlenc-0.52.jar:/home/jenkins/.m2/repository/commons-httpclient/commons-httpclient/3.1/commons-httpclient-3.1.jar:/home/jenkins/.m2/repository/commons-codec/commons-codec/1.4/commons-codec-1.4.jar:/home/jenkins/.m2/repository/commons-io/commons-io/2.1/commons-io-2.1.jar:/home/jenkins/.m2/repository/commons-net/commons-net/3.1/commons-net-3.1.jar:/home/jenkins/.m2/repository/javax/servlet/servlet-api/2.5/servlet-api-2.5.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty/6.1.26/jetty-6.1.26.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty-util/6.1.26/jetty-util-6.1.26.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-core/1.9/jersey-core-1.9.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-json/1.9/jersey-json-1.9.jar:/home/jenkins/.m2/repository/org/codehaus/jettison/jettison/1.1/jettison-1.1.jar:/home/jenkins/.m2/repository/stax/stax-api/1.0.1/stax-api-1.0.1.jar:/home/jenkins/.m2/repository/com/sun/xml/bind/jaxb-impl/2.2.3-1/jaxb-impl-2.2.3-1.jar:/home/jenkins/.m2/repository/javax/xml/bind/jaxb-api/2.2.2/jaxb-api-2.2.2.jar:/home/jenkins/.m2/repository/javax/activation/activation/1.1/activation-1.1.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-jaxrs/1.8.8/jackson-jaxrs-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-xc/1.8.8/jackson-xc-1.8.8.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-server/1.9/jersey-server-1.9.jar:/home/jenkins/.m2/repository/asm/asm/3.2/asm-3.2.jar:/home/jenkins/.m2/repository/commons-logging/commons-logging/1.1.1/commons-logging-1.1.1.jar:/home/jenkins/.m2/repository/log4j/log4j/1.2.17/log4j-1.2.17.jar:/home/jenkins/.m2/repository/net/java/dev/jets3t/jets3t/0.6.1/jets3t-0.6.1.jar:/home/jenkins/.m2/repository/commons-lang/commons-lang/2.5/commons-lang-2.5.jar:/home/jenkins/.m2/repository/commons-configuration/commons-configuration/1.6/commons-configuration-1.6.jar:/home/jenkins/.m2/repository/commons-collections/commons-collections/3.2.1/commons-collections-3.2.1.jar:/home/jenkins/.m2/repository/commons-digester/commons-digester/1.8/commons-digester-1.8.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils/1.7.0/commons-beanutils-1.7.0.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils-core/1.8.0/commons-beanutils-core-1.8.0.jar:/home/jenkins/.m2/repository/org/slf4j/slf4j-api/1.7.5/slf4j-api-1.7.5.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-core-asl/1.8.8/jackson-core-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-mapper-asl/1.8.8/jackson-mapper-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/apache/avro/avro/1.7.4/avro-1.7.4.jar:/home/jenkins/.m2/repository/com/thoughtworks/paranamer/paranamer/2.3/paranamer-2.3.jar:/home/jenkins/.m2/repository/org/xerial/snappy/snappy-java/
> 1.0.4.1/snappy-java-1.0.4.1.jar:/home/jenkins/.m2/repository/com/google/protobuf/protobuf-java/2.5.0/protobuf-java-2.5.0.jar:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-auth/target/classes:/home/jenkins/.m2/repository/com/jcraft/jsch/0.1.42/jsch-0.1.42.jar:/home/jenkins/.m2/repository/org/apache/zookeeper/zookeeper/3.4.5/zookeeper-3.4.5.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-compress/1.4.1/commons-compress-1.4.1.jar:/home/jenkins/.m2/repository/org/tukaani/xz/1.0/xz-1.0.jar
> > org.apache.hadoop.io.compress.zlib.ZlibCompressor
> > org.apache.hadoop.io.compress.zlib.ZlibDecompressor
> > org.apache.hadoop.io.compress.bzip2.Bzip2Compressor
> > org.apache.hadoop.io.compress.bzip2.Bzip2Decompressor
> > org.apache.hadoop.security.JniBasedUnixGroupsMapping
> > org.apache.hadoop.io.nativeio.NativeIO
> > org.apache.hadoop.security.JniBasedUnixGroupsNetgroupMapping
> > org.apache.hadoop.io.compress.snappy.SnappyCompressor
> > org.apache.hadoop.io.compress.snappy.SnappyDecompressor
> > org.apache.hadoop.io.compress.lz4.Lz4Compressor
> > org.apache.hadoop.io.compress.lz4.Lz4Decompressor
> > org.apache.hadoop.util.NativeCrc32
> > org.apache.hadoop.net.unix.DomainSocket
> > Error occurred during initialization of VM
> > java.lang.OutOfMemoryError: unable to create new native thread
> >
> >
> >
> > --
> > Alejandro
>

-- 
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Re: test-patch failing with OOM errors in javah

Posted by Jessie <ww...@gmail.com>.
Oh, please ignore my wrong message!


On Thu, Oct 31, 2013 at 3:59 PM, Jessie <ww...@gmail.com> wrote:

> As you know I really liked what I saw and heard during the interview
> besides what I have found via my own research online. However coming on
> board as a contractor to this environment, you can understand my concern
> about how to meet their expectation and create a win-win-win situation.
> Should I have met with the management during the interview and be more
> clear about my initial duties and responsibilities, I would be more
> comfortable coming on board as a contractor. Particularly if my initial
> assignment is performing SDET duties, then I need to feel secure to be able
> to communicate freely with my management as this job is not 'ground up',
> and diplomacy and trust and good relationship are important to the success,
> not just technical. Don't you agree with me?
>
>
> On Thu, Oct 31, 2013 at 3:20 PM, Jason Lowe <jl...@yahoo-inc.com> wrote:
>
>> Pinged Bobby who has access to the machines, and this is indeed what is
>> happening.  There were two cases:
>>
>> 1) When TestUberAM times out the minicluster it is running along with its
>> MRAppMaster process can escape.  There are a ton of threads in those
>> processes, so it doesn't take very many of these to leak before the process
>> ulimit is hit.
>>
>> 2) There were a couple of other surefire processes that had leaked but
>> they had no discernable state left that would identify which test it was
>> running other than it was something inside of mapreduce-client-jobclient
>> (which could still be TestUberAM).  The main thread and most other
>> non-daemon threads were gone, but there was a lone SocketReader thread that
>> was still hanging around.  It wasn't a daemon thread and was apparently the
>> only thread keeping the JVM alive.
>>
>> So we need to prioritize fixing the TestUberAM hang, currently tracked by
>> MAPREDUCE-5481 <https://issues.apache.org/**jira/browse/MAPREDUCE-5481<https://issues.apache.org/jira/browse/MAPREDUCE-5481>>
>> and/or find a way to keep it from escaping during builds.  There might be
>> another issue where SocketReader threads can prevent the JVM from shutting
>> down completely in some cases.
>>
>> Jason
>>
>> On 10/31/2013 08:19 AM, Jason Lowe wrote:
>>
>>> I don't think that OOM error below indicates it needs more heap space,
>>> as it's complaining about the ability to create a new native thread.  That
>>> usually is caused by lack of available virtual address space or hitting
>>> process ulimits.
>>>
>>> What's most likely going on is the jenkins user is hitting a process
>>> ulimit.  This can occur if processes have "leaked" from previous build/test
>>> runs and are using a large number of threads, or a large number of
>>> processes have leaked overall.  Could someone with access to the build
>>> machines check if that is indeed the case?  If it has, bonus points for
>>> indentifying the source of the leak. ;-)
>>>
>>> Thanks!
>>>
>>> Jason
>>>
>>> On 10/30/2013 05:39 PM, Roman Shaposhnik wrote:
>>>
>>>> I can take a look sometime later today. Meantime I can only
>>>> say that I've been running into 1Gb limit in a few builds as
>>>> of late. These days -- I just go with 2G by default.
>>>>
>>>> Thanks,
>>>> Roman.
>>>>
>>>> On Wed, Oct 30, 2013 at 3:33 PM, Alejandro Abdelnur <tu...@cloudera.com>
>>>> wrote:
>>>>
>>>>> The following is happening in builds for MAPREDUCE and YARN patches.
>>>>> I've seen the failures in hadoop5 and hadoop7 machines. I've increased
>>>>> Maven memory to 1GB (export MAVEN_OPTS="-Xmx1024m" in the jenkins
>>>>> jobs) but still some failures persist:
>>>>> https://builds.apache.org/job/**PreCommit-MAPREDUCE-Build/**4159/<https://builds.apache.org/job/PreCommit-MAPREDUCE-Build/4159/>
>>>>>
>>>>> Does anybody has an idea of what may be going on?
>>>>>
>>>>>
>>>>>
>>>>> thx
>>>>>
>>>>>
>>>>> [INFO] --- native-maven-plugin:1.0-alpha-**7:javah (default) @
>>>>> hadoop-common ---
>>>>> [INFO] /bin/sh -c cd
>>>>> /home/jenkins/jenkins-slave/**workspace/PreCommit-MAPREDUCE-**
>>>>> Build/trunk/hadoop-common-**project/hadoop-common
>>>>> && /home/jenkins/tools/java/**latest/bin/javah -d
>>>>> /home/jenkins/jenkins-slave/**workspace/PreCommit-MAPREDUCE-**
>>>>> Build/trunk/hadoop-common-**project/hadoop-common/target/**native/javah
>>>>>
>>>>> -classpath /home/jenkins/jenkins-slave/**
>>>>> workspace/PreCommit-MAPREDUCE-**Build/trunk/hadoop-common-**
>>>>> project/hadoop-common/target/**classes:/home/jenkins/jenkins-**
>>>>> slave/workspace/PreCommit-**MAPREDUCE-Build/trunk/hadoop-**
>>>>> common-project/hadoop-**annotations/target/classes:/**
>>>>> home/jenkins/tools/java/jdk1.**6.0_26/jre/../lib/tools.jar:/**
>>>>> home/jenkins/.m2/repository/**com/google/guava/guava/11.0.2/**
>>>>> guava-11.0.2.jar:/home/**jenkins/.m2/repository/com/**
>>>>> google/code/findbugs/jsr305/1.**3.9/jsr305-1.3.9.jar:/home/**
>>>>> jenkins/.m2/repository/**commons-cli/commons-cli/1.2/**
>>>>> commons-cli-1.2.jar:/home/**jenkins/.m2/repository/org/**
>>>>> apache/commons/commons-math/2.**1/commons-math-2.1.jar:/home/**
>>>>> jenkins/.m2/repository/xmlenc/**xmlenc/0.52/xmlenc-0.52.jar:/**
>>>>> home/jenkins/.m2/repository/**commons-httpclient/commons-**
>>>>> httpclient/3.1/commons-**httpclient-3.1.jar:/home/**
>>>>> jenkins/.m2/repository/**commons-codec/commons-codec/1.**
>>>>> 4/commons-codec-1.4.jar:/home/**jenkins/.m2/repository/**
>>>>> commons-io/commons-io/2.1/**commons-io-2.1.jar:/home/**
>>>>> jenkins/.m2/repository/**commons-net/commons-net/3.1/**
>>>>> commons-net-3.1.jar:/home/**jenkins/.m2/repository/javax/**
>>>>> servlet/servlet-api/2.5/**servlet-api-2.5.jar:/home/**
>>>>> jenkins/.m2/repository/org/**mortbay/jetty/jetty/6.1.26/**
>>>>> jetty-6.1.26.jar:/home/**jenkins/.m2/repository/org/**
>>>>> mortbay/jetty/jetty-util/6.1.**26/jetty-util-6.1.26.jar:/**
>>>>> home/jenkins/.m2/repository/**com/sun/jersey/jersey-core/1.**
>>>>> 9/jersey-core-1.9.jar:/home/**jenkins/.m2/repository/com/**
>>>>> sun/jersey/jersey-json/1.9/**jersey-json-1.9.jar:/home/**
>>>>> jenkins/.m2/repository/org/**codehaus/jettison/jettison/1.**
>>>>> 1/jettison-1.1.jar:/home/**jenkins/.m2/repository/stax/**
>>>>> stax-api/1.0.1/stax-api-1.0.1.**jar:/home/jenkins/.m2/**
>>>>> repository/com/sun/xml/bind/**jaxb-impl/2.2.3-1/jaxb-impl-2.**
>>>>> 2.3-1.jar:/home/jenkins/.m2/**repository/javax/xml/bind/**
>>>>> jaxb-api/2.2.2/jaxb-api-2.2.2.**jar:/home/jenkins/.m2/**
>>>>> repository/javax/activation/**activation/1.1/activation-1.1.**
>>>>> jar:/home/jenkins/.m2/**repository/org/codehaus/**
>>>>> jackson/jackson-jaxrs/1.8.8/**jackson-jaxrs-1.8.8.jar:/home/**
>>>>> jenkins/.m2/repository/org/**codehaus/jackson/jackson-xc/1.**
>>>>> 8.8/jackson-xc-1.8.8.jar:/**home/jenkins/.m2/repository/**
>>>>> com/sun/jersey/jersey-server/**1.9/jersey-server-1.9.jar:/**
>>>>> home/jenkins/.m2/repository/**asm/asm/3.2/asm-3.2.jar:/home/**
>>>>> jenkins/.m2/repository/**commons-logging/commons-**
>>>>> logging/1.1.1/commons-logging-**1.1.1.jar:/home/jenkins/.m2/**
>>>>> repository/log4j/log4j/1.2.17/**log4j-1.2.17.jar:/home/**
>>>>> jenkins/.m2/repository/net/**java/dev/jets3t/jets3t/0.6.1/**
>>>>> jets3t-0.6.1.jar:/home/**jenkins/.m2/repository/**
>>>>> commons-lang/commons-lang/2.5/**commons-lang-2.5.jar:/home/**
>>>>> jenkins/.m2/repository/**commons-configuration/commons-**
>>>>> configuration/1.6/commons-**configuration-1.6.jar:/home/**
>>>>> jenkins/.m2/repository/**commons-collections/commons-**
>>>>> collections/3.2.1/commons-**collections-3.2.1.jar:/home/**
>>>>> jenkins/.m2/repository/**commons-digester/commons-**
>>>>> digester/1.8/commons-digester-**1.8.jar:/home/jenkins/.m2/**
>>>>> repository/commons-beanutils/**commons-beanutils/1.7.0/**
>>>>> commons-beanutils-1.7.0.jar:/**home/jenkins/.m2/repository/**
>>>>> commons-beanutils/commons-**beanutils-core/1.8.0/commons-**
>>>>> beanutils-core-1.8.0.jar:/**home/jenkins/.m2/repository/**
>>>>> org/slf4j/slf4j-api/1.7.5/**slf4j-api-1.7.5.jar:/home/**
>>>>> jenkins/.m2/repository/org/**codehaus/jackson/jackson-core-**
>>>>> asl/1.8.8/jackson-core-asl-1.**8.8.jar:/home/jenkins/.m2/**
>>>>> repository/org/codehaus/**jackson/jackson-mapper-asl/1.**
>>>>> 8.8/jackson-mapper-asl-1.8.8.**jar:/home/jenkins/.m2/**
>>>>> repository/org/apache/avro/**avro/1.7.4/avro-1.7.4.jar:/**
>>>>> home/jenkins/.m2/repository/**com/thoughtworks/paranamer/**
>>>>> paranamer/2.3/paranamer-2.3.**jar:/home/jenkins/.m2/**
>>>>> repository/org/xerial/snappy/**snappy-java/1.0.4.1/snappy-**
>>>>> java-1.0.4.1.jar:/home/**jenkins/.m2/repository/com/**
>>>>> google/protobuf/protobuf-java/**2.5.0/protobuf-java-2.5.0.jar:**
>>>>> /home/jenkins/jenkins-slave/**workspace/PreCommit-MAPREDUCE-**
>>>>> Build/trunk/hadoop-common-**project/hadoop-auth/target/**
>>>>> classes:/home/jenkins/.m2/**repository/com/jcraft/jsch/0.**
>>>>> 1.42/jsch-0.1.42.jar:/home/**jenkins/.m2/repository/org/**
>>>>> apache/zookeeper/zookeeper/3.**4.5/zookeeper-3.4.5.jar:/home/**
>>>>> jenkins/.m2/repository/org/**apache/commons/commons-**
>>>>> compress/1.4.1/commons-**compress-1.4.1.jar:/home/**
>>>>> jenkins/.m2/repository/org/**tukaani/xz/1.0/xz-1.0.jar<http://1.0.4.1/snappy-java-1.0.4.1.jar:/home/jenkins/.m2/repository/com/google/protobuf/protobuf-java/2.5.0/protobuf-java-2.5.0.jar:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-auth/target/classes:/home/jenkins/.m2/repository/com/jcraft/jsch/0.1.42/jsch-0.1.42.jar:/home/jenkins/.m2/repository/org/apache/zookeeper/zookeeper/3.4.5/zookeeper-3.4.5.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-compress/1.4.1/commons-compress-1.4.1.jar:/home/jenkins/.m2/repository/org/tukaani/xz/1.0/xz-1.0.jar>
>>>>> org.apache.hadoop.io.compress.**zlib.ZlibCompressor
>>>>> org.apache.hadoop.io.compress.**zlib.ZlibDecompressor
>>>>> org.apache.hadoop.io.compress.**bzip2.Bzip2Compressor
>>>>> org.apache.hadoop.io.compress.**bzip2.Bzip2Decompressor
>>>>> org.apache.hadoop.security.**JniBasedUnixGroupsMapping
>>>>> org.apache.hadoop.io.nativeio.**NativeIO
>>>>> org.apache.hadoop.security.**JniBasedUnixGroupsNetgroupMapp**ing
>>>>> org.apache.hadoop.io.compress.**snappy.SnappyCompressor
>>>>> org.apache.hadoop.io.compress.**snappy.SnappyDecompressor
>>>>> org.apache.hadoop.io.compress.**lz4.Lz4Compressor
>>>>> org.apache.hadoop.io.compress.**lz4.Lz4Decompressor
>>>>> org.apache.hadoop.util.**NativeCrc32
>>>>> org.apache.hadoop.net.unix.**DomainSocket
>>>>> Error occurred during initialization of VM
>>>>> java.lang.OutOfMemoryError: unable to create new native thread
>>>>>
>>>>>
>>>>>
>>>>> --
>>>>> Alejandro
>>>>>
>>>>
>>>
>>>
>>
>

Re: test-patch failing with OOM errors in javah

Posted by Jessie <ww...@gmail.com>.
As you know I really liked what I saw and heard during the interview
besides what I have found via my own research online. However coming on
board as a contractor to this environment, you can understand my concern
about how to meet their expectation and create a win-win-win situation.
Should I have met with the management during the interview and be more
clear about my initial duties and responsibilities, I would be more
comfortable coming on board as a contractor. Particularly if my initial
assignment is performing SDET duties, then I need to feel secure to be able
to communicate freely with my management as this job is not 'ground up',
and diplomacy and trust and good relationship are important to the success,
not just technical. Don't you agree with me?


On Thu, Oct 31, 2013 at 3:20 PM, Jason Lowe <jl...@yahoo-inc.com> wrote:

> Pinged Bobby who has access to the machines, and this is indeed what is
> happening.  There were two cases:
>
> 1) When TestUberAM times out the minicluster it is running along with its
> MRAppMaster process can escape.  There are a ton of threads in those
> processes, so it doesn't take very many of these to leak before the process
> ulimit is hit.
>
> 2) There were a couple of other surefire processes that had leaked but
> they had no discernable state left that would identify which test it was
> running other than it was something inside of mapreduce-client-jobclient
> (which could still be TestUberAM).  The main thread and most other
> non-daemon threads were gone, but there was a lone SocketReader thread that
> was still hanging around.  It wasn't a daemon thread and was apparently the
> only thread keeping the JVM alive.
>
> So we need to prioritize fixing the TestUberAM hang, currently tracked by
> MAPREDUCE-5481 <https://issues.apache.org/**jira/browse/MAPREDUCE-5481<https://issues.apache.org/jira/browse/MAPREDUCE-5481>>
> and/or find a way to keep it from escaping during builds.  There might be
> another issue where SocketReader threads can prevent the JVM from shutting
> down completely in some cases.
>
> Jason
>
> On 10/31/2013 08:19 AM, Jason Lowe wrote:
>
>> I don't think that OOM error below indicates it needs more heap space, as
>> it's complaining about the ability to create a new native thread.  That
>> usually is caused by lack of available virtual address space or hitting
>> process ulimits.
>>
>> What's most likely going on is the jenkins user is hitting a process
>> ulimit.  This can occur if processes have "leaked" from previous build/test
>> runs and are using a large number of threads, or a large number of
>> processes have leaked overall.  Could someone with access to the build
>> machines check if that is indeed the case?  If it has, bonus points for
>> indentifying the source of the leak. ;-)
>>
>> Thanks!
>>
>> Jason
>>
>> On 10/30/2013 05:39 PM, Roman Shaposhnik wrote:
>>
>>> I can take a look sometime later today. Meantime I can only
>>> say that I've been running into 1Gb limit in a few builds as
>>> of late. These days -- I just go with 2G by default.
>>>
>>> Thanks,
>>> Roman.
>>>
>>> On Wed, Oct 30, 2013 at 3:33 PM, Alejandro Abdelnur <tu...@cloudera.com>
>>> wrote:
>>>
>>>> The following is happening in builds for MAPREDUCE and YARN patches.
>>>> I've seen the failures in hadoop5 and hadoop7 machines. I've increased
>>>> Maven memory to 1GB (export MAVEN_OPTS="-Xmx1024m" in the jenkins
>>>> jobs) but still some failures persist:
>>>> https://builds.apache.org/job/**PreCommit-MAPREDUCE-Build/**4159/<https://builds.apache.org/job/PreCommit-MAPREDUCE-Build/4159/>
>>>>
>>>> Does anybody has an idea of what may be going on?
>>>>
>>>>
>>>>
>>>> thx
>>>>
>>>>
>>>> [INFO] --- native-maven-plugin:1.0-alpha-**7:javah (default) @
>>>> hadoop-common ---
>>>> [INFO] /bin/sh -c cd
>>>> /home/jenkins/jenkins-slave/**workspace/PreCommit-MAPREDUCE-**
>>>> Build/trunk/hadoop-common-**project/hadoop-common
>>>> && /home/jenkins/tools/java/**latest/bin/javah -d
>>>> /home/jenkins/jenkins-slave/**workspace/PreCommit-MAPREDUCE-**
>>>> Build/trunk/hadoop-common-**project/hadoop-common/target/**native/javah
>>>>
>>>> -classpath /home/jenkins/jenkins-slave/**workspace/PreCommit-MAPREDUCE-
>>>> **Build/trunk/hadoop-common-**project/hadoop-common/target/**
>>>> classes:/home/jenkins/jenkins-**slave/workspace/PreCommit-**
>>>> MAPREDUCE-Build/trunk/hadoop-**common-project/hadoop-**
>>>> annotations/target/classes:/**home/jenkins/tools/java/jdk1.**
>>>> 6.0_26/jre/../lib/tools.jar:/**home/jenkins/.m2/repository/**
>>>> com/google/guava/guava/11.0.2/**guava-11.0.2.jar:/home/**
>>>> jenkins/.m2/repository/com/**google/code/findbugs/jsr305/1.**
>>>> 3.9/jsr305-1.3.9.jar:/home/**jenkins/.m2/repository/**
>>>> commons-cli/commons-cli/1.2/**commons-cli-1.2.jar:/home/**
>>>> jenkins/.m2/repository/org/**apache/commons/commons-math/2.**
>>>> 1/commons-math-2.1.jar:/home/**jenkins/.m2/repository/xmlenc/**
>>>> xmlenc/0.52/xmlenc-0.52.jar:/**home/jenkins/.m2/repository/**
>>>> commons-httpclient/commons-**httpclient/3.1/commons-**
>>>> httpclient-3.1.jar:/home/**jenkins/.m2/repository/**
>>>> commons-codec/commons-codec/1.**4/commons-codec-1.4.jar:/home/**
>>>> jenkins/.m2/repository/**commons-io/commons-io/2.1/**
>>>> commons-io-2.1.jar:/home/**jenkins/.m2/repository/**
>>>> commons-net/commons-net/3.1/**commons-net-3.1.jar:/home/**
>>>> jenkins/.m2/repository/javax/**servlet/servlet-api/2.5/**
>>>> servlet-api-2.5.jar:/home/**jenkins/.m2/repository/org/**
>>>> mortbay/jetty/jetty/6.1.26/**jetty-6.1.26.jar:/home/**
>>>> jenkins/.m2/repository/org/**mortbay/jetty/jetty-util/6.1.**
>>>> 26/jetty-util-6.1.26.jar:/**home/jenkins/.m2/repository/**
>>>> com/sun/jersey/jersey-core/1.**9/jersey-core-1.9.jar:/home/**
>>>> jenkins/.m2/repository/com/**sun/jersey/jersey-json/1.9/**
>>>> jersey-json-1.9.jar:/home/**jenkins/.m2/repository/org/**
>>>> codehaus/jettison/jettison/1.**1/jettison-1.1.jar:/home/**
>>>> jenkins/.m2/repository/stax/**stax-api/1.0.1/stax-api-1.0.1.**
>>>> jar:/home/jenkins/.m2/**repository/com/sun/xml/bind/**
>>>> jaxb-impl/2.2.3-1/jaxb-impl-2.**2.3-1.jar:/home/jenkins/.m2/**
>>>> repository/javax/xml/bind/**jaxb-api/2.2.2/jaxb-api-2.2.2.**
>>>> jar:/home/jenkins/.m2/**repository/javax/activation/**
>>>> activation/1.1/activation-1.1.**jar:/home/jenkins/.m2/**
>>>> repository/org/codehaus/**jackson/jackson-jaxrs/1.8.8/**
>>>> jackson-jaxrs-1.8.8.jar:/home/**jenkins/.m2/repository/org/**
>>>> codehaus/jackson/jackson-xc/1.**8.8/jackson-xc-1.8.8.jar:/**
>>>> home/jenkins/.m2/repository/**com/sun/jersey/jersey-server/**
>>>> 1.9/jersey-server-1.9.jar:/**home/jenkins/.m2/repository/**
>>>> asm/asm/3.2/asm-3.2.jar:/home/**jenkins/.m2/repository/**
>>>> commons-logging/commons-**logging/1.1.1/commons-logging-**
>>>> 1.1.1.jar:/home/jenkins/.m2/**repository/log4j/log4j/1.2.17/**
>>>> log4j-1.2.17.jar:/home/**jenkins/.m2/repository/net/**
>>>> java/dev/jets3t/jets3t/0.6.1/**jets3t-0.6.1.jar:/home/**
>>>> jenkins/.m2/repository/**commons-lang/commons-lang/2.5/**
>>>> commons-lang-2.5.jar:/home/**jenkins/.m2/repository/**
>>>> commons-configuration/commons-**configuration/1.6/commons-**
>>>> configuration-1.6.jar:/home/**jenkins/.m2/repository/**
>>>> commons-collections/commons-**collections/3.2.1/commons-**
>>>> collections-3.2.1.jar:/home/**jenkins/.m2/repository/**
>>>> commons-digester/commons-**digester/1.8/commons-digester-**
>>>> 1.8.jar:/home/jenkins/.m2/**repository/commons-beanutils/**
>>>> commons-beanutils/1.7.0/**commons-beanutils-1.7.0.jar:/**
>>>> home/jenkins/.m2/repository/**commons-beanutils/commons-**
>>>> beanutils-core/1.8.0/commons-**beanutils-core-1.8.0.jar:/**
>>>> home/jenkins/.m2/repository/**org/slf4j/slf4j-api/1.7.5/**
>>>> slf4j-api-1.7.5.jar:/home/**jenkins/.m2/repository/org/**
>>>> codehaus/jackson/jackson-core-**asl/1.8.8/jackson-core-asl-1.**
>>>> 8.8.jar:/home/jenkins/.m2/**repository/org/codehaus/**
>>>> jackson/jackson-mapper-asl/1.**8.8/jackson-mapper-asl-1.8.8.**
>>>> jar:/home/jenkins/.m2/**repository/org/apache/avro/**
>>>> avro/1.7.4/avro-1.7.4.jar:/**home/jenkins/.m2/repository/**
>>>> com/thoughtworks/paranamer/**paranamer/2.3/paranamer-2.3.**
>>>> jar:/home/jenkins/.m2/**repository/org/xerial/snappy/**snappy-java/
>>>> 1.0.4.1/snappy-**java-1.0.4.1.jar:/home/**jenkins/.m2/repository/com/**
>>>> google/protobuf/protobuf-java/**2.5.0/protobuf-java-2.5.0.jar:**
>>>> /home/jenkins/jenkins-slave/**workspace/PreCommit-MAPREDUCE-**
>>>> Build/trunk/hadoop-common-**project/hadoop-auth/target/**
>>>> classes:/home/jenkins/.m2/**repository/com/jcraft/jsch/0.**
>>>> 1.42/jsch-0.1.42.jar:/home/**jenkins/.m2/repository/org/**
>>>> apache/zookeeper/zookeeper/3.**4.5/zookeeper-3.4.5.jar:/home/**
>>>> jenkins/.m2/repository/org/**apache/commons/commons-**
>>>> compress/1.4.1/commons-**compress-1.4.1.jar:/home/**
>>>> jenkins/.m2/repository/org/**tukaani/xz/1.0/xz-1.0.jar<http://1.0.4.1/snappy-java-1.0.4.1.jar:/home/jenkins/.m2/repository/com/google/protobuf/protobuf-java/2.5.0/protobuf-java-2.5.0.jar:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-auth/target/classes:/home/jenkins/.m2/repository/com/jcraft/jsch/0.1.42/jsch-0.1.42.jar:/home/jenkins/.m2/repository/org/apache/zookeeper/zookeeper/3.4.5/zookeeper-3.4.5.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-compress/1.4.1/commons-compress-1.4.1.jar:/home/jenkins/.m2/repository/org/tukaani/xz/1.0/xz-1.0.jar>
>>>> org.apache.hadoop.io.compress.**zlib.ZlibCompressor
>>>> org.apache.hadoop.io.compress.**zlib.ZlibDecompressor
>>>> org.apache.hadoop.io.compress.**bzip2.Bzip2Compressor
>>>> org.apache.hadoop.io.compress.**bzip2.Bzip2Decompressor
>>>> org.apache.hadoop.security.**JniBasedUnixGroupsMapping
>>>> org.apache.hadoop.io.nativeio.**NativeIO
>>>> org.apache.hadoop.security.**JniBasedUnixGroupsNetgroupMapp**ing
>>>> org.apache.hadoop.io.compress.**snappy.SnappyCompressor
>>>> org.apache.hadoop.io.compress.**snappy.SnappyDecompressor
>>>> org.apache.hadoop.io.compress.**lz4.Lz4Compressor
>>>> org.apache.hadoop.io.compress.**lz4.Lz4Decompressor
>>>> org.apache.hadoop.util.**NativeCrc32
>>>> org.apache.hadoop.net.unix.**DomainSocket
>>>> Error occurred during initialization of VM
>>>> java.lang.OutOfMemoryError: unable to create new native thread
>>>>
>>>>
>>>>
>>>> --
>>>> Alejandro
>>>>
>>>
>>
>>
>

Re: test-patch failing with OOM errors in javah

Posted by Jason Lowe <jl...@yahoo-inc.com>.
Pinged Bobby who has access to the machines, and this is indeed what is 
happening.  There were two cases:

1) When TestUberAM times out the minicluster it is running along with 
its MRAppMaster process can escape.  There are a ton of threads in those 
processes, so it doesn't take very many of these to leak before the 
process ulimit is hit.

2) There were a couple of other surefire processes that had leaked but 
they had no discernable state left that would identify which test it was 
running other than it was something inside of mapreduce-client-jobclient 
(which could still be TestUberAM).  The main thread and most other 
non-daemon threads were gone, but there was a lone SocketReader thread 
that was still hanging around.  It wasn't a daemon thread and was 
apparently the only thread keeping the JVM alive.

So we need to prioritize fixing the TestUberAM hang, currently tracked 
by MAPREDUCE-5481 <https://issues.apache.org/jira/browse/MAPREDUCE-5481> 
and/or find a way to keep it from escaping during builds.  There might 
be another issue where SocketReader threads can prevent the JVM from 
shutting down completely in some cases.

Jason

On 10/31/2013 08:19 AM, Jason Lowe wrote:
> I don't think that OOM error below indicates it needs more heap space, 
> as it's complaining about the ability to create a new native thread.  
> That usually is caused by lack of available virtual address space or 
> hitting process ulimits.
>
> What's most likely going on is the jenkins user is hitting a process 
> ulimit.  This can occur if processes have "leaked" from previous 
> build/test runs and are using a large number of threads, or a large 
> number of processes have leaked overall.  Could someone with access to 
> the build machines check if that is indeed the case?  If it has, bonus 
> points for indentifying the source of the leak. ;-)
>
> Thanks!
>
> Jason
>
> On 10/30/2013 05:39 PM, Roman Shaposhnik wrote:
>> I can take a look sometime later today. Meantime I can only
>> say that I've been running into 1Gb limit in a few builds as
>> of late. These days -- I just go with 2G by default.
>>
>> Thanks,
>> Roman.
>>
>> On Wed, Oct 30, 2013 at 3:33 PM, Alejandro Abdelnur 
>> <tu...@cloudera.com> wrote:
>>> The following is happening in builds for MAPREDUCE and YARN patches.
>>> I've seen the failures in hadoop5 and hadoop7 machines. I've increased
>>> Maven memory to 1GB (export MAVEN_OPTS="-Xmx1024m" in the jenkins
>>> jobs) but still some failures persist:
>>> https://builds.apache.org/job/PreCommit-MAPREDUCE-Build/4159/
>>>
>>> Does anybody has an idea of what may be going on?
>>>
>>>
>>>
>>> thx
>>>
>>>
>>> [INFO] --- native-maven-plugin:1.0-alpha-7:javah (default) @ 
>>> hadoop-common ---
>>> [INFO] /bin/sh -c cd
>>> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common 
>>>
>>> && /home/jenkins/tools/java/latest/bin/javah -d
>>> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/native/javah 
>>>
>>> -classpath 
>>> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/classes:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-annotations/target/classes:/home/jenkins/tools/java/jdk1.6.0_26/jre/../lib/tools.jar:/home/jenkins/.m2/repository/com/google/guava/guava/11.0.2/guava-11.0.2.jar:/home/jenkins/.m2/repository/com/google/code/findbugs/jsr305/1.3.9/jsr305-1.3.9.jar:/home/jenkins/.m2/repository/commons-cli/commons-cli/1.2/commons-cli-1.2.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-math/2.1/commons-math-2.1.jar:/home/jenkins/.m2/repository/xmlenc/xmlenc/0.52/xmlenc-0.52.jar:/home/jenkins/.m2/repository/commons-httpclient/commons-httpclient/3.1/commons-httpclient-3.1.jar:/home/jenkins/.m2/repository/commons-codec/commons-codec/1.4/commons-codec-1.4.jar:/home/jenkins/.m2/repository/commons-io/commons-io/2.1/commons-io-2.1.jar:/home/jenkins/.m2/repository/commons-net/commons-net/3.1/commons-net-3.1.jar:/home/jenkins/.m2/repository/javax/servlet/servlet-api/2.5/servlet-api-2.5.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty/6.1.26/jetty-6.1.26.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty-util/6.1.26/jetty-util-6.1.26.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-core/1.9/jersey-core-1.9.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-json/1.9/jersey-json-1.9.jar:/home/jenkins/.m2/repository/org/codehaus/jettison/jettison/1.1/jettison-1.1.jar:/home/jenkins/.m2/repository/stax/stax-api/1.0.1/stax-api-1.0.1.jar:/home/jenkins/.m2/repository/com/sun/xml/bind/jaxb-impl/2.2.3-1/jaxb-impl-2.2.3-1.jar:/home/jenkins/.m2/repository/javax/xml/bind/jaxb-api/2.2.2/jaxb-api-2.2.2.jar:/home/jenkins/.m2/repository/javax/activation/activation/1.1/activation-1.1.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-jaxrs/1.8.8/jackson-jaxrs-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-xc/1.8.8/jackson-xc-1.8.8.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-server/1.9/jersey-server-1.9.jar:/home/jenkins/.m2/repository/asm/asm/3.2/asm-3.2.jar:/home/jenkins/.m2/repository/commons-logging/commons-logging/1.1.1/commons-logging-1.1.1.jar:/home/jenkins/.m2/repository/log4j/log4j/1.2.17/log4j-1.2.17.jar:/home/jenkins/.m2/repository/net/java/dev/jets3t/jets3t/0.6.1/jets3t-0.6.1.jar:/home/jenkins/.m2/repository/commons-lang/commons-lang/2.5/commons-lang-2.5.jar:/home/jenkins/.m2/repository/commons-configuration/commons-configuration/1.6/commons-configuration-1.6.jar:/home/jenkins/.m2/repository/commons-collections/commons-collections/3.2.1/commons-collections-3.2.1.jar:/home/jenkins/.m2/repository/commons-digester/commons-digester/1.8/commons-digester-1.8.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils/1.7.0/commons-beanutils-1.7.0.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils-core/1.8.0/commons-beanutils-core-1.8.0.jar:/home/jenkins/.m2/repository/org/slf4j/slf4j-api/1.7.5/slf4j-api-1.7.5.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-core-asl/1.8.8/jackson-core-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-mapper-asl/1.8.8/jackson-mapper-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/apache/avro/avro/1.7.4/avro-1.7.4.jar:/home/jenkins/.m2/repository/com/thoughtworks/paranamer/paranamer/2.3/paranamer-2.3.jar:/home/jenkins/.m2/repository/org/xerial/snappy/snappy-java/1.0.4.1/snappy-java-1.0.4.1.jar:/home/jenkins/.m2/repository/com/google/protobuf/protobuf-java/2.5.0/protobuf-java-2.5.0.jar:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-auth/target/classes:/home/jenkins/.m2/repository/com/jcraft/jsch/0.1.42/jsch-0.1.42.jar:/home/jenkins/.m2/repository/org/apache/zookeeper/zookeeper/3.4.5/zookeeper-3.4.5.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-compress/1.4.1/commons-compress-1.4.1.jar:/home/jenkins/.m2/repository/org/tukaani/xz/1.0/xz-1.0.jar
>>> org.apache.hadoop.io.compress.zlib.ZlibCompressor
>>> org.apache.hadoop.io.compress.zlib.ZlibDecompressor
>>> org.apache.hadoop.io.compress.bzip2.Bzip2Compressor
>>> org.apache.hadoop.io.compress.bzip2.Bzip2Decompressor
>>> org.apache.hadoop.security.JniBasedUnixGroupsMapping
>>> org.apache.hadoop.io.nativeio.NativeIO
>>> org.apache.hadoop.security.JniBasedUnixGroupsNetgroupMapping
>>> org.apache.hadoop.io.compress.snappy.SnappyCompressor
>>> org.apache.hadoop.io.compress.snappy.SnappyDecompressor
>>> org.apache.hadoop.io.compress.lz4.Lz4Compressor
>>> org.apache.hadoop.io.compress.lz4.Lz4Decompressor
>>> org.apache.hadoop.util.NativeCrc32
>>> org.apache.hadoop.net.unix.DomainSocket
>>> Error occurred during initialization of VM
>>> java.lang.OutOfMemoryError: unable to create new native thread
>>>
>>>
>>>
>>> -- 
>>> Alejandro
>
>


Re: test-patch failing with OOM errors in javah

Posted by Jason Lowe <jl...@yahoo-inc.com>.
Pinged Bobby who has access to the machines, and this is indeed what is 
happening.  There were two cases:

1) When TestUberAM times out the minicluster it is running along with 
its MRAppMaster process can escape.  There are a ton of threads in those 
processes, so it doesn't take very many of these to leak before the 
process ulimit is hit.

2) There were a couple of other surefire processes that had leaked but 
they had no discernable state left that would identify which test it was 
running other than it was something inside of mapreduce-client-jobclient 
(which could still be TestUberAM).  The main thread and most other 
non-daemon threads were gone, but there was a lone SocketReader thread 
that was still hanging around.  It wasn't a daemon thread and was 
apparently the only thread keeping the JVM alive.

So we need to prioritize fixing the TestUberAM hang, currently tracked 
by MAPREDUCE-5481 <https://issues.apache.org/jira/browse/MAPREDUCE-5481> 
and/or find a way to keep it from escaping during builds.  There might 
be another issue where SocketReader threads can prevent the JVM from 
shutting down completely in some cases.

Jason

On 10/31/2013 08:19 AM, Jason Lowe wrote:
> I don't think that OOM error below indicates it needs more heap space, 
> as it's complaining about the ability to create a new native thread.  
> That usually is caused by lack of available virtual address space or 
> hitting process ulimits.
>
> What's most likely going on is the jenkins user is hitting a process 
> ulimit.  This can occur if processes have "leaked" from previous 
> build/test runs and are using a large number of threads, or a large 
> number of processes have leaked overall.  Could someone with access to 
> the build machines check if that is indeed the case?  If it has, bonus 
> points for indentifying the source of the leak. ;-)
>
> Thanks!
>
> Jason
>
> On 10/30/2013 05:39 PM, Roman Shaposhnik wrote:
>> I can take a look sometime later today. Meantime I can only
>> say that I've been running into 1Gb limit in a few builds as
>> of late. These days -- I just go with 2G by default.
>>
>> Thanks,
>> Roman.
>>
>> On Wed, Oct 30, 2013 at 3:33 PM, Alejandro Abdelnur 
>> <tu...@cloudera.com> wrote:
>>> The following is happening in builds for MAPREDUCE and YARN patches.
>>> I've seen the failures in hadoop5 and hadoop7 machines. I've increased
>>> Maven memory to 1GB (export MAVEN_OPTS="-Xmx1024m" in the jenkins
>>> jobs) but still some failures persist:
>>> https://builds.apache.org/job/PreCommit-MAPREDUCE-Build/4159/
>>>
>>> Does anybody has an idea of what may be going on?
>>>
>>>
>>>
>>> thx
>>>
>>>
>>> [INFO] --- native-maven-plugin:1.0-alpha-7:javah (default) @ 
>>> hadoop-common ---
>>> [INFO] /bin/sh -c cd
>>> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common 
>>>
>>> && /home/jenkins/tools/java/latest/bin/javah -d
>>> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/native/javah 
>>>
>>> -classpath 
>>> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/classes:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-annotations/target/classes:/home/jenkins/tools/java/jdk1.6.0_26/jre/../lib/tools.jar:/home/jenkins/.m2/repository/com/google/guava/guava/11.0.2/guava-11.0.2.jar:/home/jenkins/.m2/repository/com/google/code/findbugs/jsr305/1.3.9/jsr305-1.3.9.jar:/home/jenkins/.m2/repository/commons-cli/commons-cli/1.2/commons-cli-1.2.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-math/2.1/commons-math-2.1.jar:/home/jenkins/.m2/repository/xmlenc/xmlenc/0.52/xmlenc-0.52.jar:/home/jenkins/.m2/repository/commons-httpclient/commons-httpclient/3.1/commons-httpclient-3.1.jar:/home/jenkins/.m2/repository/commons-codec/commons-codec/1.4/commons-codec-1.4.jar:/home/jenkins/.m2/repository/commons-io/commons-io/2.1/commons-io-2.1.jar:/home/jenkins/.m2/repository/commons-net/commons-net/3.1/commons-net-3.1.jar:/home/jenkins/.m2/repository/javax/servlet/servlet-api/2.5/servlet-api-2.5.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty/6.1.26/jetty-6.1.26.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty-util/6.1.26/jetty-util-6.1.26.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-core/1.9/jersey-core-1.9.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-json/1.9/jersey-json-1.9.jar:/home/jenkins/.m2/repository/org/codehaus/jettison/jettison/1.1/jettison-1.1.jar:/home/jenkins/.m2/repository/stax/stax-api/1.0.1/stax-api-1.0.1.jar:/home/jenkins/.m2/repository/com/sun/xml/bind/jaxb-impl/2.2.3-1/jaxb-impl-2.2.3-1.jar:/home/jenkins/.m2/repository/javax/xml/bind/jaxb-api/2.2.2/jaxb-api-2.2.2.jar:/home/jenkins/.m2/repository/javax/activation/activation/1.1/activation-1.1.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-jaxrs/1.8.8/jackson-jaxrs-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-xc/1.8.8/jackson-xc-1.8.8.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-server/1.9/jersey-server-1.9.jar:/home/jenkins/.m2/repository/asm/asm/3.2/asm-3.2.jar:/home/jenkins/.m2/repository/commons-logging/commons-logging/1.1.1/commons-logging-1.1.1.jar:/home/jenkins/.m2/repository/log4j/log4j/1.2.17/log4j-1.2.17.jar:/home/jenkins/.m2/repository/net/java/dev/jets3t/jets3t/0.6.1/jets3t-0.6.1.jar:/home/jenkins/.m2/repository/commons-lang/commons-lang/2.5/commons-lang-2.5.jar:/home/jenkins/.m2/repository/commons-configuration/commons-configuration/1.6/commons-configuration-1.6.jar:/home/jenkins/.m2/repository/commons-collections/commons-collections/3.2.1/commons-collections-3.2.1.jar:/home/jenkins/.m2/repository/commons-digester/commons-digester/1.8/commons-digester-1.8.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils/1.7.0/commons-beanutils-1.7.0.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils-core/1.8.0/commons-beanutils-core-1.8.0.jar:/home/jenkins/.m2/repository/org/slf4j/slf4j-api/1.7.5/slf4j-api-1.7.5.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-core-asl/1.8.8/jackson-core-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-mapper-asl/1.8.8/jackson-mapper-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/apache/avro/avro/1.7.4/avro-1.7.4.jar:/home/jenkins/.m2/repository/com/thoughtworks/paranamer/paranamer/2.3/paranamer-2.3.jar:/home/jenkins/.m2/repository/org/xerial/snappy/snappy-java/1.0.4.1/snappy-java-1.0.4.1.jar:/home/jenkins/.m2/repository/com/google/protobuf/protobuf-java/2.5.0/protobuf-java-2.5.0.jar:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-auth/target/classes:/home/jenkins/.m2/repository/com/jcraft/jsch/0.1.42/jsch-0.1.42.jar:/home/jenkins/.m2/repository/org/apache/zookeeper/zookeeper/3.4.5/zookeeper-3.4.5.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-compress/1.4.1/commons-compress-1.4.1.jar:/home/jenkins/.m2/repository/org/tukaani/xz/1.0/xz-1.0.jar
>>> org.apache.hadoop.io.compress.zlib.ZlibCompressor
>>> org.apache.hadoop.io.compress.zlib.ZlibDecompressor
>>> org.apache.hadoop.io.compress.bzip2.Bzip2Compressor
>>> org.apache.hadoop.io.compress.bzip2.Bzip2Decompressor
>>> org.apache.hadoop.security.JniBasedUnixGroupsMapping
>>> org.apache.hadoop.io.nativeio.NativeIO
>>> org.apache.hadoop.security.JniBasedUnixGroupsNetgroupMapping
>>> org.apache.hadoop.io.compress.snappy.SnappyCompressor
>>> org.apache.hadoop.io.compress.snappy.SnappyDecompressor
>>> org.apache.hadoop.io.compress.lz4.Lz4Compressor
>>> org.apache.hadoop.io.compress.lz4.Lz4Decompressor
>>> org.apache.hadoop.util.NativeCrc32
>>> org.apache.hadoop.net.unix.DomainSocket
>>> Error occurred during initialization of VM
>>> java.lang.OutOfMemoryError: unable to create new native thread
>>>
>>>
>>>
>>> -- 
>>> Alejandro
>
>


Re: test-patch failing with OOM errors in javah

Posted by Jason Lowe <jl...@yahoo-inc.com>.
Pinged Bobby who has access to the machines, and this is indeed what is 
happening.  There were two cases:

1) When TestUberAM times out the minicluster it is running along with 
its MRAppMaster process can escape.  There are a ton of threads in those 
processes, so it doesn't take very many of these to leak before the 
process ulimit is hit.

2) There were a couple of other surefire processes that had leaked but 
they had no discernable state left that would identify which test it was 
running other than it was something inside of mapreduce-client-jobclient 
(which could still be TestUberAM).  The main thread and most other 
non-daemon threads were gone, but there was a lone SocketReader thread 
that was still hanging around.  It wasn't a daemon thread and was 
apparently the only thread keeping the JVM alive.

So we need to prioritize fixing the TestUberAM hang, currently tracked 
by MAPREDUCE-5481 <https://issues.apache.org/jira/browse/MAPREDUCE-5481> 
and/or find a way to keep it from escaping during builds.  There might 
be another issue where SocketReader threads can prevent the JVM from 
shutting down completely in some cases.

Jason

On 10/31/2013 08:19 AM, Jason Lowe wrote:
> I don't think that OOM error below indicates it needs more heap space, 
> as it's complaining about the ability to create a new native thread.  
> That usually is caused by lack of available virtual address space or 
> hitting process ulimits.
>
> What's most likely going on is the jenkins user is hitting a process 
> ulimit.  This can occur if processes have "leaked" from previous 
> build/test runs and are using a large number of threads, or a large 
> number of processes have leaked overall.  Could someone with access to 
> the build machines check if that is indeed the case?  If it has, bonus 
> points for indentifying the source of the leak. ;-)
>
> Thanks!
>
> Jason
>
> On 10/30/2013 05:39 PM, Roman Shaposhnik wrote:
>> I can take a look sometime later today. Meantime I can only
>> say that I've been running into 1Gb limit in a few builds as
>> of late. These days -- I just go with 2G by default.
>>
>> Thanks,
>> Roman.
>>
>> On Wed, Oct 30, 2013 at 3:33 PM, Alejandro Abdelnur 
>> <tu...@cloudera.com> wrote:
>>> The following is happening in builds for MAPREDUCE and YARN patches.
>>> I've seen the failures in hadoop5 and hadoop7 machines. I've increased
>>> Maven memory to 1GB (export MAVEN_OPTS="-Xmx1024m" in the jenkins
>>> jobs) but still some failures persist:
>>> https://builds.apache.org/job/PreCommit-MAPREDUCE-Build/4159/
>>>
>>> Does anybody has an idea of what may be going on?
>>>
>>>
>>>
>>> thx
>>>
>>>
>>> [INFO] --- native-maven-plugin:1.0-alpha-7:javah (default) @ 
>>> hadoop-common ---
>>> [INFO] /bin/sh -c cd
>>> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common 
>>>
>>> && /home/jenkins/tools/java/latest/bin/javah -d
>>> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/native/javah 
>>>
>>> -classpath 
>>> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/classes:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-annotations/target/classes:/home/jenkins/tools/java/jdk1.6.0_26/jre/../lib/tools.jar:/home/jenkins/.m2/repository/com/google/guava/guava/11.0.2/guava-11.0.2.jar:/home/jenkins/.m2/repository/com/google/code/findbugs/jsr305/1.3.9/jsr305-1.3.9.jar:/home/jenkins/.m2/repository/commons-cli/commons-cli/1.2/commons-cli-1.2.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-math/2.1/commons-math-2.1.jar:/home/jenkins/.m2/repository/xmlenc/xmlenc/0.52/xmlenc-0.52.jar:/home/jenkins/.m2/repository/commons-httpclient/commons-httpclient/3.1/commons-httpclient-3.1.jar:/home/jenkins/.m2/repository/commons-codec/commons-codec/1.4/commons-codec-1.4.jar:/home/jenkins/.m2/repository/commons-io/commons-io/2.1/commons-io-2.1.jar:/home/jenkins/.m2/repository/commons-net/commons-net/3.1/commons-net-3.1.jar:/home/jenkins/.m2/repository/javax/servlet/servlet-api/2.5/servlet-api-2.5.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty/6.1.26/jetty-6.1.26.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty-util/6.1.26/jetty-util-6.1.26.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-core/1.9/jersey-core-1.9.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-json/1.9/jersey-json-1.9.jar:/home/jenkins/.m2/repository/org/codehaus/jettison/jettison/1.1/jettison-1.1.jar:/home/jenkins/.m2/repository/stax/stax-api/1.0.1/stax-api-1.0.1.jar:/home/jenkins/.m2/repository/com/sun/xml/bind/jaxb-impl/2.2.3-1/jaxb-impl-2.2.3-1.jar:/home/jenkins/.m2/repository/javax/xml/bind/jaxb-api/2.2.2/jaxb-api-2.2.2.jar:/home/jenkins/.m2/repository/javax/activation/activation/1.1/activation-1.1.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-jaxrs/1.8.8/jackson-jaxrs-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-xc/1.8.8/jackson-xc-1.8.8.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-server/1.9/jersey-server-1.9.jar:/home/jenkins/.m2/repository/asm/asm/3.2/asm-3.2.jar:/home/jenkins/.m2/repository/commons-logging/commons-logging/1.1.1/commons-logging-1.1.1.jar:/home/jenkins/.m2/repository/log4j/log4j/1.2.17/log4j-1.2.17.jar:/home/jenkins/.m2/repository/net/java/dev/jets3t/jets3t/0.6.1/jets3t-0.6.1.jar:/home/jenkins/.m2/repository/commons-lang/commons-lang/2.5/commons-lang-2.5.jar:/home/jenkins/.m2/repository/commons-configuration/commons-configuration/1.6/commons-configuration-1.6.jar:/home/jenkins/.m2/repository/commons-collections/commons-collections/3.2.1/commons-collections-3.2.1.jar:/home/jenkins/.m2/repository/commons-digester/commons-digester/1.8/commons-digester-1.8.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils/1.7.0/commons-beanutils-1.7.0.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils-core/1.8.0/commons-beanutils-core-1.8.0.jar:/home/jenkins/.m2/repository/org/slf4j/slf4j-api/1.7.5/slf4j-api-1.7.5.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-core-asl/1.8.8/jackson-core-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-mapper-asl/1.8.8/jackson-mapper-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/apache/avro/avro/1.7.4/avro-1.7.4.jar:/home/jenkins/.m2/repository/com/thoughtworks/paranamer/paranamer/2.3/paranamer-2.3.jar:/home/jenkins/.m2/repository/org/xerial/snappy/snappy-java/1.0.4.1/snappy-java-1.0.4.1.jar:/home/jenkins/.m2/repository/com/google/protobuf/protobuf-java/2.5.0/protobuf-java-2.5.0.jar:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-auth/target/classes:/home/jenkins/.m2/repository/com/jcraft/jsch/0.1.42/jsch-0.1.42.jar:/home/jenkins/.m2/repository/org/apache/zookeeper/zookeeper/3.4.5/zookeeper-3.4.5.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-compress/1.4.1/commons-compress-1.4.1.jar:/home/jenkins/.m2/repository/org/tukaani/xz/1.0/xz-1.0.jar
>>> org.apache.hadoop.io.compress.zlib.ZlibCompressor
>>> org.apache.hadoop.io.compress.zlib.ZlibDecompressor
>>> org.apache.hadoop.io.compress.bzip2.Bzip2Compressor
>>> org.apache.hadoop.io.compress.bzip2.Bzip2Decompressor
>>> org.apache.hadoop.security.JniBasedUnixGroupsMapping
>>> org.apache.hadoop.io.nativeio.NativeIO
>>> org.apache.hadoop.security.JniBasedUnixGroupsNetgroupMapping
>>> org.apache.hadoop.io.compress.snappy.SnappyCompressor
>>> org.apache.hadoop.io.compress.snappy.SnappyDecompressor
>>> org.apache.hadoop.io.compress.lz4.Lz4Compressor
>>> org.apache.hadoop.io.compress.lz4.Lz4Decompressor
>>> org.apache.hadoop.util.NativeCrc32
>>> org.apache.hadoop.net.unix.DomainSocket
>>> Error occurred during initialization of VM
>>> java.lang.OutOfMemoryError: unable to create new native thread
>>>
>>>
>>>
>>> -- 
>>> Alejandro
>
>


Re: test-patch failing with OOM errors in javah

Posted by Jason Lowe <jl...@yahoo-inc.com>.
Pinged Bobby who has access to the machines, and this is indeed what is 
happening.  There were two cases:

1) When TestUberAM times out the minicluster it is running along with 
its MRAppMaster process can escape.  There are a ton of threads in those 
processes, so it doesn't take very many of these to leak before the 
process ulimit is hit.

2) There were a couple of other surefire processes that had leaked but 
they had no discernable state left that would identify which test it was 
running other than it was something inside of mapreduce-client-jobclient 
(which could still be TestUberAM).  The main thread and most other 
non-daemon threads were gone, but there was a lone SocketReader thread 
that was still hanging around.  It wasn't a daemon thread and was 
apparently the only thread keeping the JVM alive.

So we need to prioritize fixing the TestUberAM hang, currently tracked 
by MAPREDUCE-5481 <https://issues.apache.org/jira/browse/MAPREDUCE-5481> 
and/or find a way to keep it from escaping during builds.  There might 
be another issue where SocketReader threads can prevent the JVM from 
shutting down completely in some cases.

Jason

On 10/31/2013 08:19 AM, Jason Lowe wrote:
> I don't think that OOM error below indicates it needs more heap space, 
> as it's complaining about the ability to create a new native thread.  
> That usually is caused by lack of available virtual address space or 
> hitting process ulimits.
>
> What's most likely going on is the jenkins user is hitting a process 
> ulimit.  This can occur if processes have "leaked" from previous 
> build/test runs and are using a large number of threads, or a large 
> number of processes have leaked overall.  Could someone with access to 
> the build machines check if that is indeed the case?  If it has, bonus 
> points for indentifying the source of the leak. ;-)
>
> Thanks!
>
> Jason
>
> On 10/30/2013 05:39 PM, Roman Shaposhnik wrote:
>> I can take a look sometime later today. Meantime I can only
>> say that I've been running into 1Gb limit in a few builds as
>> of late. These days -- I just go with 2G by default.
>>
>> Thanks,
>> Roman.
>>
>> On Wed, Oct 30, 2013 at 3:33 PM, Alejandro Abdelnur 
>> <tu...@cloudera.com> wrote:
>>> The following is happening in builds for MAPREDUCE and YARN patches.
>>> I've seen the failures in hadoop5 and hadoop7 machines. I've increased
>>> Maven memory to 1GB (export MAVEN_OPTS="-Xmx1024m" in the jenkins
>>> jobs) but still some failures persist:
>>> https://builds.apache.org/job/PreCommit-MAPREDUCE-Build/4159/
>>>
>>> Does anybody has an idea of what may be going on?
>>>
>>>
>>>
>>> thx
>>>
>>>
>>> [INFO] --- native-maven-plugin:1.0-alpha-7:javah (default) @ 
>>> hadoop-common ---
>>> [INFO] /bin/sh -c cd
>>> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common 
>>>
>>> && /home/jenkins/tools/java/latest/bin/javah -d
>>> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/native/javah 
>>>
>>> -classpath 
>>> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/classes:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-annotations/target/classes:/home/jenkins/tools/java/jdk1.6.0_26/jre/../lib/tools.jar:/home/jenkins/.m2/repository/com/google/guava/guava/11.0.2/guava-11.0.2.jar:/home/jenkins/.m2/repository/com/google/code/findbugs/jsr305/1.3.9/jsr305-1.3.9.jar:/home/jenkins/.m2/repository/commons-cli/commons-cli/1.2/commons-cli-1.2.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-math/2.1/commons-math-2.1.jar:/home/jenkins/.m2/repository/xmlenc/xmlenc/0.52/xmlenc-0.52.jar:/home/jenkins/.m2/repository/commons-httpclient/commons-httpclient/3.1/commons-httpclient-3.1.jar:/home/jenkins/.m2/repository/commons-codec/commons-codec/1.4/commons-codec-1.4.jar:/home/jenkins/.m2/repository/commons-io/commons-io/2.1/commons-io-2.1.jar:/home/jenkins/.m2/repository/commons-net/commons-net/3.1/commons-net-3.1.jar:/home/jenkins/.m2/repository/javax/servlet/servlet-api/2.5/servlet-api-2.5.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty/6.1.26/jetty-6.1.26.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty-util/6.1.26/jetty-util-6.1.26.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-core/1.9/jersey-core-1.9.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-json/1.9/jersey-json-1.9.jar:/home/jenkins/.m2/repository/org/codehaus/jettison/jettison/1.1/jettison-1.1.jar:/home/jenkins/.m2/repository/stax/stax-api/1.0.1/stax-api-1.0.1.jar:/home/jenkins/.m2/repository/com/sun/xml/bind/jaxb-impl/2.2.3-1/jaxb-impl-2.2.3-1.jar:/home/jenkins/.m2/repository/javax/xml/bind/jaxb-api/2.2.2/jaxb-api-2.2.2.jar:/home/jenkins/.m2/repository/javax/activation/activation/1.1/activation-1.1.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-jaxrs/1.8.8/jackson-jaxrs-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-xc/1.8.8/jackson-xc-1.8.8.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-server/1.9/jersey-server-1.9.jar:/home/jenkins/.m2/repository/asm/asm/3.2/asm-3.2.jar:/home/jenkins/.m2/repository/commons-logging/commons-logging/1.1.1/commons-logging-1.1.1.jar:/home/jenkins/.m2/repository/log4j/log4j/1.2.17/log4j-1.2.17.jar:/home/jenkins/.m2/repository/net/java/dev/jets3t/jets3t/0.6.1/jets3t-0.6.1.jar:/home/jenkins/.m2/repository/commons-lang/commons-lang/2.5/commons-lang-2.5.jar:/home/jenkins/.m2/repository/commons-configuration/commons-configuration/1.6/commons-configuration-1.6.jar:/home/jenkins/.m2/repository/commons-collections/commons-collections/3.2.1/commons-collections-3.2.1.jar:/home/jenkins/.m2/repository/commons-digester/commons-digester/1.8/commons-digester-1.8.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils/1.7.0/commons-beanutils-1.7.0.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils-core/1.8.0/commons-beanutils-core-1.8.0.jar:/home/jenkins/.m2/repository/org/slf4j/slf4j-api/1.7.5/slf4j-api-1.7.5.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-core-asl/1.8.8/jackson-core-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-mapper-asl/1.8.8/jackson-mapper-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/apache/avro/avro/1.7.4/avro-1.7.4.jar:/home/jenkins/.m2/repository/com/thoughtworks/paranamer/paranamer/2.3/paranamer-2.3.jar:/home/jenkins/.m2/repository/org/xerial/snappy/snappy-java/1.0.4.1/snappy-java-1.0.4.1.jar:/home/jenkins/.m2/repository/com/google/protobuf/protobuf-java/2.5.0/protobuf-java-2.5.0.jar:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-auth/target/classes:/home/jenkins/.m2/repository/com/jcraft/jsch/0.1.42/jsch-0.1.42.jar:/home/jenkins/.m2/repository/org/apache/zookeeper/zookeeper/3.4.5/zookeeper-3.4.5.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-compress/1.4.1/commons-compress-1.4.1.jar:/home/jenkins/.m2/repository/org/tukaani/xz/1.0/xz-1.0.jar
>>> org.apache.hadoop.io.compress.zlib.ZlibCompressor
>>> org.apache.hadoop.io.compress.zlib.ZlibDecompressor
>>> org.apache.hadoop.io.compress.bzip2.Bzip2Compressor
>>> org.apache.hadoop.io.compress.bzip2.Bzip2Decompressor
>>> org.apache.hadoop.security.JniBasedUnixGroupsMapping
>>> org.apache.hadoop.io.nativeio.NativeIO
>>> org.apache.hadoop.security.JniBasedUnixGroupsNetgroupMapping
>>> org.apache.hadoop.io.compress.snappy.SnappyCompressor
>>> org.apache.hadoop.io.compress.snappy.SnappyDecompressor
>>> org.apache.hadoop.io.compress.lz4.Lz4Compressor
>>> org.apache.hadoop.io.compress.lz4.Lz4Decompressor
>>> org.apache.hadoop.util.NativeCrc32
>>> org.apache.hadoop.net.unix.DomainSocket
>>> Error occurred during initialization of VM
>>> java.lang.OutOfMemoryError: unable to create new native thread
>>>
>>>
>>>
>>> -- 
>>> Alejandro
>
>


Re: test-patch failing with OOM errors in javah

Posted by Jason Lowe <jl...@yahoo-inc.com>.
I don't think that OOM error below indicates it needs more heap space, 
as it's complaining about the ability to create a new native thread.  
That usually is caused by lack of available virtual address space or 
hitting process ulimits.

What's most likely going on is the jenkins user is hitting a process 
ulimit.  This can occur if processes have "leaked" from previous 
build/test runs and are using a large number of threads, or a large 
number of processes have leaked overall.  Could someone with access to 
the build machines check if that is indeed the case?  If it has, bonus 
points for indentifying the source of the leak. ;-)

Thanks!

Jason

On 10/30/2013 05:39 PM, Roman Shaposhnik wrote:
> I can take a look sometime later today. Meantime I can only
> say that I've been running into 1Gb limit in a few builds as
> of late. These days -- I just go with 2G by default.
>
> Thanks,
> Roman.
>
> On Wed, Oct 30, 2013 at 3:33 PM, Alejandro Abdelnur <tu...@cloudera.com> wrote:
>> The following is happening in builds for MAPREDUCE and YARN patches.
>> I've seen the failures in hadoop5 and hadoop7 machines. I've increased
>> Maven memory to 1GB (export MAVEN_OPTS="-Xmx1024m" in the jenkins
>> jobs) but still some failures persist:
>> https://builds.apache.org/job/PreCommit-MAPREDUCE-Build/4159/
>>
>> Does anybody has an idea of what may be going on?
>>
>>
>>
>> thx
>>
>>
>> [INFO] --- native-maven-plugin:1.0-alpha-7:javah (default) @ hadoop-common ---
>> [INFO] /bin/sh -c cd
>> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common
>> && /home/jenkins/tools/java/latest/bin/javah -d
>> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/native/javah
>> -classpath /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/classes:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-annotations/target/classes:/home/jenkins/tools/java/jdk1.6.0_26/jre/../lib/tools.jar:/home/jenkins/.m2/repository/com/google/guava/guava/11.0.2/guava-11.0.2.jar:/home/jenkins/.m2/repository/com/google/code/findbugs/jsr305/1.3.9/jsr305-1.3.9.jar:/home/jenkins/.m2/repository/commons-cli/commons-cli/1.2/commons-cli-1.2.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-math/2.1/commons-math-2.1.jar:/home/jenkins/.m2/repository/xmlenc/xmlenc/0.52/xmlenc-0.52.jar:/home/jenkins/.m2/repository/commons-httpclient/commons-httpclient/3.1/commons-httpclient-3.1.jar:/home/jenkins/.m2/repository/commons-codec/commons-codec/1.4/commons-codec-1.4.jar:/home/jenkins/.m2/repository/commons-io/commons-io/2.1/commons-io-2.1.jar:/home/jenkins/.m2/repository/commons-net/commons-net/3.1/commons-net-3.1.jar:/home/jenkins/.m2/repository/javax/servlet/servlet-api/2.5/servlet-api-2.5.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty/6.1.26/jetty-6.1.26.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty-util/6.1.26/jetty-util-6.1.26.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-core/1.9/jersey-core-1.9.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-json/1.9/jersey-json-1.9.jar:/home/jenkins/.m2/repository/org/codehaus/jettison/jettison/1.1/jettison-1.1.jar:/home/jenkins/.m2/repository/stax/stax-api/1.0.1/stax-api-1.0.1.jar:/home/jenkins/.m2/repository/com/sun/xml/bind/jaxb-impl/2.2.3-1/jaxb-impl-2.2.3-1.jar:/home/jenkins/.m2/repository/javax/xml/bind/jaxb-api/2.2.2/jaxb-api-2.2.2.jar:/home/jenkins/.m2/repository/javax/activation/activation/1.1/activation-1.1.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-jaxrs/1.8.8/jackson-jaxrs-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-xc/1.8.8/jackson-xc-1.8.8.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-server/1.9/jersey-server-1.9.jar:/home/jenkins/.m2/repository/asm/asm/3.2/asm-3.2.jar:/home/jenkins/.m2/repository/commons-logging/commons-logging/1.1.1/commons-logging-1.1.1.jar:/home/jenkins/.m2/repository/log4j/log4j/1.2.17/log4j-1.2.17.jar:/home/jenkins/.m2/repository/net/java/dev/jets3t/jets3t/0.6.1/jets3t-0.6.1.jar:/home/jenkins/.m2/repository/commons-lang/commons-lang/2.5/commons-lang-2.5.jar:/home/jenkins/.m2/repository/commons-configuration/commons-configuration/1.6/commons-configuration-1.6.jar:/home/jenkins/.m2/repository/commons-collections/commons-collections/3.2.1/commons-collections-3.2.1.jar:/home/jenkins/.m2/repository/commons-digester/commons-digester/1.8/commons-digester-1.8.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils/1.7.0/commons-beanutils-1.7.0.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils-core/1.8.0/commons-beanutils-core-1.8.0.jar:/home/jenkins/.m2/repository/org/slf4j/slf4j-api/1.7.5/slf4j-api-1.7.5.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-core-asl/1.8.8/jackson-core-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-mapper-asl/1.8.8/jackson-mapper-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/apache/avro/avro/1.7.4/avro-1.7.4.jar:/home/jenkins/.m2/repository/com/thoughtworks/paranamer/paranamer/2.3/paranamer-2.3.jar:/home/jenkins/.m2/repository/org/xerial/snappy/snappy-java/1.0.4.1/snappy-java-1.0.4.1.jar:/home/jenkins/.m2/repository/com/google/protobuf/protobuf-java/2.5.0/protobuf-java-2.5.0.jar:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-auth/target/classes:/home/jenkins/.m2/repository/com/jcraft/jsch/0.1.42/jsch-0.1.42.jar:/home/jenkins/.m2/repository/org/apache/zookeeper/zookeeper/3.4.5/zookeeper-3.4.5.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-compress/1.4.1/commons-compress-1.4.1.jar:/home/jenkins/.m2/repository/org/tukaani/xz/1.0/xz-1.0.jar
>> org.apache.hadoop.io.compress.zlib.ZlibCompressor
>> org.apache.hadoop.io.compress.zlib.ZlibDecompressor
>> org.apache.hadoop.io.compress.bzip2.Bzip2Compressor
>> org.apache.hadoop.io.compress.bzip2.Bzip2Decompressor
>> org.apache.hadoop.security.JniBasedUnixGroupsMapping
>> org.apache.hadoop.io.nativeio.NativeIO
>> org.apache.hadoop.security.JniBasedUnixGroupsNetgroupMapping
>> org.apache.hadoop.io.compress.snappy.SnappyCompressor
>> org.apache.hadoop.io.compress.snappy.SnappyDecompressor
>> org.apache.hadoop.io.compress.lz4.Lz4Compressor
>> org.apache.hadoop.io.compress.lz4.Lz4Decompressor
>> org.apache.hadoop.util.NativeCrc32
>> org.apache.hadoop.net.unix.DomainSocket
>> Error occurred during initialization of VM
>> java.lang.OutOfMemoryError: unable to create new native thread
>>
>>
>>
>> --
>> Alejandro



Re: test-patch failing with OOM errors in javah

Posted by Jason Lowe <jl...@yahoo-inc.com>.
I don't think that OOM error below indicates it needs more heap space, 
as it's complaining about the ability to create a new native thread.  
That usually is caused by lack of available virtual address space or 
hitting process ulimits.

What's most likely going on is the jenkins user is hitting a process 
ulimit.  This can occur if processes have "leaked" from previous 
build/test runs and are using a large number of threads, or a large 
number of processes have leaked overall.  Could someone with access to 
the build machines check if that is indeed the case?  If it has, bonus 
points for indentifying the source of the leak. ;-)

Thanks!

Jason

On 10/30/2013 05:39 PM, Roman Shaposhnik wrote:
> I can take a look sometime later today. Meantime I can only
> say that I've been running into 1Gb limit in a few builds as
> of late. These days -- I just go with 2G by default.
>
> Thanks,
> Roman.
>
> On Wed, Oct 30, 2013 at 3:33 PM, Alejandro Abdelnur <tu...@cloudera.com> wrote:
>> The following is happening in builds for MAPREDUCE and YARN patches.
>> I've seen the failures in hadoop5 and hadoop7 machines. I've increased
>> Maven memory to 1GB (export MAVEN_OPTS="-Xmx1024m" in the jenkins
>> jobs) but still some failures persist:
>> https://builds.apache.org/job/PreCommit-MAPREDUCE-Build/4159/
>>
>> Does anybody has an idea of what may be going on?
>>
>>
>>
>> thx
>>
>>
>> [INFO] --- native-maven-plugin:1.0-alpha-7:javah (default) @ hadoop-common ---
>> [INFO] /bin/sh -c cd
>> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common
>> && /home/jenkins/tools/java/latest/bin/javah -d
>> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/native/javah
>> -classpath /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/classes:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-annotations/target/classes:/home/jenkins/tools/java/jdk1.6.0_26/jre/../lib/tools.jar:/home/jenkins/.m2/repository/com/google/guava/guava/11.0.2/guava-11.0.2.jar:/home/jenkins/.m2/repository/com/google/code/findbugs/jsr305/1.3.9/jsr305-1.3.9.jar:/home/jenkins/.m2/repository/commons-cli/commons-cli/1.2/commons-cli-1.2.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-math/2.1/commons-math-2.1.jar:/home/jenkins/.m2/repository/xmlenc/xmlenc/0.52/xmlenc-0.52.jar:/home/jenkins/.m2/repository/commons-httpclient/commons-httpclient/3.1/commons-httpclient-3.1.jar:/home/jenkins/.m2/repository/commons-codec/commons-codec/1.4/commons-codec-1.4.jar:/home/jenkins/.m2/repository/commons-io/commons-io/2.1/commons-io-2.1.jar:/home/jenkins/.m2/repository/commons-net/commons-net/3.1/commons-net-3.1.jar:/home/jenkins/.m2/repository/javax/servlet/servlet-api/2.5/servlet-api-2.5.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty/6.1.26/jetty-6.1.26.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty-util/6.1.26/jetty-util-6.1.26.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-core/1.9/jersey-core-1.9.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-json/1.9/jersey-json-1.9.jar:/home/jenkins/.m2/repository/org/codehaus/jettison/jettison/1.1/jettison-1.1.jar:/home/jenkins/.m2/repository/stax/stax-api/1.0.1/stax-api-1.0.1.jar:/home/jenkins/.m2/repository/com/sun/xml/bind/jaxb-impl/2.2.3-1/jaxb-impl-2.2.3-1.jar:/home/jenkins/.m2/repository/javax/xml/bind/jaxb-api/2.2.2/jaxb-api-2.2.2.jar:/home/jenkins/.m2/repository/javax/activation/activation/1.1/activation-1.1.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-jaxrs/1.8.8/jackson-jaxrs-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-xc/1.8.8/jackson-xc-1.8.8.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-server/1.9/jersey-server-1.9.jar:/home/jenkins/.m2/repository/asm/asm/3.2/asm-3.2.jar:/home/jenkins/.m2/repository/commons-logging/commons-logging/1.1.1/commons-logging-1.1.1.jar:/home/jenkins/.m2/repository/log4j/log4j/1.2.17/log4j-1.2.17.jar:/home/jenkins/.m2/repository/net/java/dev/jets3t/jets3t/0.6.1/jets3t-0.6.1.jar:/home/jenkins/.m2/repository/commons-lang/commons-lang/2.5/commons-lang-2.5.jar:/home/jenkins/.m2/repository/commons-configuration/commons-configuration/1.6/commons-configuration-1.6.jar:/home/jenkins/.m2/repository/commons-collections/commons-collections/3.2.1/commons-collections-3.2.1.jar:/home/jenkins/.m2/repository/commons-digester/commons-digester/1.8/commons-digester-1.8.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils/1.7.0/commons-beanutils-1.7.0.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils-core/1.8.0/commons-beanutils-core-1.8.0.jar:/home/jenkins/.m2/repository/org/slf4j/slf4j-api/1.7.5/slf4j-api-1.7.5.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-core-asl/1.8.8/jackson-core-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-mapper-asl/1.8.8/jackson-mapper-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/apache/avro/avro/1.7.4/avro-1.7.4.jar:/home/jenkins/.m2/repository/com/thoughtworks/paranamer/paranamer/2.3/paranamer-2.3.jar:/home/jenkins/.m2/repository/org/xerial/snappy/snappy-java/1.0.4.1/snappy-java-1.0.4.1.jar:/home/jenkins/.m2/repository/com/google/protobuf/protobuf-java/2.5.0/protobuf-java-2.5.0.jar:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-auth/target/classes:/home/jenkins/.m2/repository/com/jcraft/jsch/0.1.42/jsch-0.1.42.jar:/home/jenkins/.m2/repository/org/apache/zookeeper/zookeeper/3.4.5/zookeeper-3.4.5.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-compress/1.4.1/commons-compress-1.4.1.jar:/home/jenkins/.m2/repository/org/tukaani/xz/1.0/xz-1.0.jar
>> org.apache.hadoop.io.compress.zlib.ZlibCompressor
>> org.apache.hadoop.io.compress.zlib.ZlibDecompressor
>> org.apache.hadoop.io.compress.bzip2.Bzip2Compressor
>> org.apache.hadoop.io.compress.bzip2.Bzip2Decompressor
>> org.apache.hadoop.security.JniBasedUnixGroupsMapping
>> org.apache.hadoop.io.nativeio.NativeIO
>> org.apache.hadoop.security.JniBasedUnixGroupsNetgroupMapping
>> org.apache.hadoop.io.compress.snappy.SnappyCompressor
>> org.apache.hadoop.io.compress.snappy.SnappyDecompressor
>> org.apache.hadoop.io.compress.lz4.Lz4Compressor
>> org.apache.hadoop.io.compress.lz4.Lz4Decompressor
>> org.apache.hadoop.util.NativeCrc32
>> org.apache.hadoop.net.unix.DomainSocket
>> Error occurred during initialization of VM
>> java.lang.OutOfMemoryError: unable to create new native thread
>>
>>
>>
>> --
>> Alejandro



Re: test-patch failing with OOM errors in javah

Posted by Jason Lowe <jl...@yahoo-inc.com>.
I don't think that OOM error below indicates it needs more heap space, 
as it's complaining about the ability to create a new native thread.  
That usually is caused by lack of available virtual address space or 
hitting process ulimits.

What's most likely going on is the jenkins user is hitting a process 
ulimit.  This can occur if processes have "leaked" from previous 
build/test runs and are using a large number of threads, or a large 
number of processes have leaked overall.  Could someone with access to 
the build machines check if that is indeed the case?  If it has, bonus 
points for indentifying the source of the leak. ;-)

Thanks!

Jason

On 10/30/2013 05:39 PM, Roman Shaposhnik wrote:
> I can take a look sometime later today. Meantime I can only
> say that I've been running into 1Gb limit in a few builds as
> of late. These days -- I just go with 2G by default.
>
> Thanks,
> Roman.
>
> On Wed, Oct 30, 2013 at 3:33 PM, Alejandro Abdelnur <tu...@cloudera.com> wrote:
>> The following is happening in builds for MAPREDUCE and YARN patches.
>> I've seen the failures in hadoop5 and hadoop7 machines. I've increased
>> Maven memory to 1GB (export MAVEN_OPTS="-Xmx1024m" in the jenkins
>> jobs) but still some failures persist:
>> https://builds.apache.org/job/PreCommit-MAPREDUCE-Build/4159/
>>
>> Does anybody has an idea of what may be going on?
>>
>>
>>
>> thx
>>
>>
>> [INFO] --- native-maven-plugin:1.0-alpha-7:javah (default) @ hadoop-common ---
>> [INFO] /bin/sh -c cd
>> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common
>> && /home/jenkins/tools/java/latest/bin/javah -d
>> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/native/javah
>> -classpath /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/classes:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-annotations/target/classes:/home/jenkins/tools/java/jdk1.6.0_26/jre/../lib/tools.jar:/home/jenkins/.m2/repository/com/google/guava/guava/11.0.2/guava-11.0.2.jar:/home/jenkins/.m2/repository/com/google/code/findbugs/jsr305/1.3.9/jsr305-1.3.9.jar:/home/jenkins/.m2/repository/commons-cli/commons-cli/1.2/commons-cli-1.2.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-math/2.1/commons-math-2.1.jar:/home/jenkins/.m2/repository/xmlenc/xmlenc/0.52/xmlenc-0.52.jar:/home/jenkins/.m2/repository/commons-httpclient/commons-httpclient/3.1/commons-httpclient-3.1.jar:/home/jenkins/.m2/repository/commons-codec/commons-codec/1.4/commons-codec-1.4.jar:/home/jenkins/.m2/repository/commons-io/commons-io/2.1/commons-io-2.1.jar:/home/jenkins/.m2/repository/commons-net/commons-net/3.1/commons-net-3.1.jar:/home/jenkins/.m2/repository/javax/servlet/servlet-api/2.5/servlet-api-2.5.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty/6.1.26/jetty-6.1.26.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty-util/6.1.26/jetty-util-6.1.26.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-core/1.9/jersey-core-1.9.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-json/1.9/jersey-json-1.9.jar:/home/jenkins/.m2/repository/org/codehaus/jettison/jettison/1.1/jettison-1.1.jar:/home/jenkins/.m2/repository/stax/stax-api/1.0.1/stax-api-1.0.1.jar:/home/jenkins/.m2/repository/com/sun/xml/bind/jaxb-impl/2.2.3-1/jaxb-impl-2.2.3-1.jar:/home/jenkins/.m2/repository/javax/xml/bind/jaxb-api/2.2.2/jaxb-api-2.2.2.jar:/home/jenkins/.m2/repository/javax/activation/activation/1.1/activation-1.1.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-jaxrs/1.8.8/jackson-jaxrs-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-xc/1.8.8/jackson-xc-1.8.8.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-server/1.9/jersey-server-1.9.jar:/home/jenkins/.m2/repository/asm/asm/3.2/asm-3.2.jar:/home/jenkins/.m2/repository/commons-logging/commons-logging/1.1.1/commons-logging-1.1.1.jar:/home/jenkins/.m2/repository/log4j/log4j/1.2.17/log4j-1.2.17.jar:/home/jenkins/.m2/repository/net/java/dev/jets3t/jets3t/0.6.1/jets3t-0.6.1.jar:/home/jenkins/.m2/repository/commons-lang/commons-lang/2.5/commons-lang-2.5.jar:/home/jenkins/.m2/repository/commons-configuration/commons-configuration/1.6/commons-configuration-1.6.jar:/home/jenkins/.m2/repository/commons-collections/commons-collections/3.2.1/commons-collections-3.2.1.jar:/home/jenkins/.m2/repository/commons-digester/commons-digester/1.8/commons-digester-1.8.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils/1.7.0/commons-beanutils-1.7.0.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils-core/1.8.0/commons-beanutils-core-1.8.0.jar:/home/jenkins/.m2/repository/org/slf4j/slf4j-api/1.7.5/slf4j-api-1.7.5.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-core-asl/1.8.8/jackson-core-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-mapper-asl/1.8.8/jackson-mapper-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/apache/avro/avro/1.7.4/avro-1.7.4.jar:/home/jenkins/.m2/repository/com/thoughtworks/paranamer/paranamer/2.3/paranamer-2.3.jar:/home/jenkins/.m2/repository/org/xerial/snappy/snappy-java/1.0.4.1/snappy-java-1.0.4.1.jar:/home/jenkins/.m2/repository/com/google/protobuf/protobuf-java/2.5.0/protobuf-java-2.5.0.jar:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-auth/target/classes:/home/jenkins/.m2/repository/com/jcraft/jsch/0.1.42/jsch-0.1.42.jar:/home/jenkins/.m2/repository/org/apache/zookeeper/zookeeper/3.4.5/zookeeper-3.4.5.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-compress/1.4.1/commons-compress-1.4.1.jar:/home/jenkins/.m2/repository/org/tukaani/xz/1.0/xz-1.0.jar
>> org.apache.hadoop.io.compress.zlib.ZlibCompressor
>> org.apache.hadoop.io.compress.zlib.ZlibDecompressor
>> org.apache.hadoop.io.compress.bzip2.Bzip2Compressor
>> org.apache.hadoop.io.compress.bzip2.Bzip2Decompressor
>> org.apache.hadoop.security.JniBasedUnixGroupsMapping
>> org.apache.hadoop.io.nativeio.NativeIO
>> org.apache.hadoop.security.JniBasedUnixGroupsNetgroupMapping
>> org.apache.hadoop.io.compress.snappy.SnappyCompressor
>> org.apache.hadoop.io.compress.snappy.SnappyDecompressor
>> org.apache.hadoop.io.compress.lz4.Lz4Compressor
>> org.apache.hadoop.io.compress.lz4.Lz4Decompressor
>> org.apache.hadoop.util.NativeCrc32
>> org.apache.hadoop.net.unix.DomainSocket
>> Error occurred during initialization of VM
>> java.lang.OutOfMemoryError: unable to create new native thread
>>
>>
>>
>> --
>> Alejandro



Re: test-patch failing with OOM errors in javah

Posted by Jason Lowe <jl...@yahoo-inc.com>.
I don't think that OOM error below indicates it needs more heap space, 
as it's complaining about the ability to create a new native thread.  
That usually is caused by lack of available virtual address space or 
hitting process ulimits.

What's most likely going on is the jenkins user is hitting a process 
ulimit.  This can occur if processes have "leaked" from previous 
build/test runs and are using a large number of threads, or a large 
number of processes have leaked overall.  Could someone with access to 
the build machines check if that is indeed the case?  If it has, bonus 
points for indentifying the source of the leak. ;-)

Thanks!

Jason

On 10/30/2013 05:39 PM, Roman Shaposhnik wrote:
> I can take a look sometime later today. Meantime I can only
> say that I've been running into 1Gb limit in a few builds as
> of late. These days -- I just go with 2G by default.
>
> Thanks,
> Roman.
>
> On Wed, Oct 30, 2013 at 3:33 PM, Alejandro Abdelnur <tu...@cloudera.com> wrote:
>> The following is happening in builds for MAPREDUCE and YARN patches.
>> I've seen the failures in hadoop5 and hadoop7 machines. I've increased
>> Maven memory to 1GB (export MAVEN_OPTS="-Xmx1024m" in the jenkins
>> jobs) but still some failures persist:
>> https://builds.apache.org/job/PreCommit-MAPREDUCE-Build/4159/
>>
>> Does anybody has an idea of what may be going on?
>>
>>
>>
>> thx
>>
>>
>> [INFO] --- native-maven-plugin:1.0-alpha-7:javah (default) @ hadoop-common ---
>> [INFO] /bin/sh -c cd
>> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common
>> && /home/jenkins/tools/java/latest/bin/javah -d
>> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/native/javah
>> -classpath /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/classes:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-annotations/target/classes:/home/jenkins/tools/java/jdk1.6.0_26/jre/../lib/tools.jar:/home/jenkins/.m2/repository/com/google/guava/guava/11.0.2/guava-11.0.2.jar:/home/jenkins/.m2/repository/com/google/code/findbugs/jsr305/1.3.9/jsr305-1.3.9.jar:/home/jenkins/.m2/repository/commons-cli/commons-cli/1.2/commons-cli-1.2.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-math/2.1/commons-math-2.1.jar:/home/jenkins/.m2/repository/xmlenc/xmlenc/0.52/xmlenc-0.52.jar:/home/jenkins/.m2/repository/commons-httpclient/commons-httpclient/3.1/commons-httpclient-3.1.jar:/home/jenkins/.m2/repository/commons-codec/commons-codec/1.4/commons-codec-1.4.jar:/home/jenkins/.m2/repository/commons-io/commons-io/2.1/commons-io-2.1.jar:/home/jenkins/.m2/repository/commons-net/commons-net/3.1/commons-net-3.1.jar:/home/jenkins/.m2/repository/javax/servlet/servlet-api/2.5/servlet-api-2.5.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty/6.1.26/jetty-6.1.26.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty-util/6.1.26/jetty-util-6.1.26.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-core/1.9/jersey-core-1.9.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-json/1.9/jersey-json-1.9.jar:/home/jenkins/.m2/repository/org/codehaus/jettison/jettison/1.1/jettison-1.1.jar:/home/jenkins/.m2/repository/stax/stax-api/1.0.1/stax-api-1.0.1.jar:/home/jenkins/.m2/repository/com/sun/xml/bind/jaxb-impl/2.2.3-1/jaxb-impl-2.2.3-1.jar:/home/jenkins/.m2/repository/javax/xml/bind/jaxb-api/2.2.2/jaxb-api-2.2.2.jar:/home/jenkins/.m2/repository/javax/activation/activation/1.1/activation-1.1.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-jaxrs/1.8.8/jackson-jaxrs-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-xc/1.8.8/jackson-xc-1.8.8.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-server/1.9/jersey-server-1.9.jar:/home/jenkins/.m2/repository/asm/asm/3.2/asm-3.2.jar:/home/jenkins/.m2/repository/commons-logging/commons-logging/1.1.1/commons-logging-1.1.1.jar:/home/jenkins/.m2/repository/log4j/log4j/1.2.17/log4j-1.2.17.jar:/home/jenkins/.m2/repository/net/java/dev/jets3t/jets3t/0.6.1/jets3t-0.6.1.jar:/home/jenkins/.m2/repository/commons-lang/commons-lang/2.5/commons-lang-2.5.jar:/home/jenkins/.m2/repository/commons-configuration/commons-configuration/1.6/commons-configuration-1.6.jar:/home/jenkins/.m2/repository/commons-collections/commons-collections/3.2.1/commons-collections-3.2.1.jar:/home/jenkins/.m2/repository/commons-digester/commons-digester/1.8/commons-digester-1.8.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils/1.7.0/commons-beanutils-1.7.0.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils-core/1.8.0/commons-beanutils-core-1.8.0.jar:/home/jenkins/.m2/repository/org/slf4j/slf4j-api/1.7.5/slf4j-api-1.7.5.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-core-asl/1.8.8/jackson-core-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-mapper-asl/1.8.8/jackson-mapper-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/apache/avro/avro/1.7.4/avro-1.7.4.jar:/home/jenkins/.m2/repository/com/thoughtworks/paranamer/paranamer/2.3/paranamer-2.3.jar:/home/jenkins/.m2/repository/org/xerial/snappy/snappy-java/1.0.4.1/snappy-java-1.0.4.1.jar:/home/jenkins/.m2/repository/com/google/protobuf/protobuf-java/2.5.0/protobuf-java-2.5.0.jar:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-auth/target/classes:/home/jenkins/.m2/repository/com/jcraft/jsch/0.1.42/jsch-0.1.42.jar:/home/jenkins/.m2/repository/org/apache/zookeeper/zookeeper/3.4.5/zookeeper-3.4.5.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-compress/1.4.1/commons-compress-1.4.1.jar:/home/jenkins/.m2/repository/org/tukaani/xz/1.0/xz-1.0.jar
>> org.apache.hadoop.io.compress.zlib.ZlibCompressor
>> org.apache.hadoop.io.compress.zlib.ZlibDecompressor
>> org.apache.hadoop.io.compress.bzip2.Bzip2Compressor
>> org.apache.hadoop.io.compress.bzip2.Bzip2Decompressor
>> org.apache.hadoop.security.JniBasedUnixGroupsMapping
>> org.apache.hadoop.io.nativeio.NativeIO
>> org.apache.hadoop.security.JniBasedUnixGroupsNetgroupMapping
>> org.apache.hadoop.io.compress.snappy.SnappyCompressor
>> org.apache.hadoop.io.compress.snappy.SnappyDecompressor
>> org.apache.hadoop.io.compress.lz4.Lz4Compressor
>> org.apache.hadoop.io.compress.lz4.Lz4Decompressor
>> org.apache.hadoop.util.NativeCrc32
>> org.apache.hadoop.net.unix.DomainSocket
>> Error occurred during initialization of VM
>> java.lang.OutOfMemoryError: unable to create new native thread
>>
>>
>>
>> --
>> Alejandro



Re: test-patch failing with OOM errors in javah

Posted by Omkar Joshi <oj...@hortonworks.com>.
yes even I do the same.. I just use this to build

export _JAVA_OPTIONS="-Djava.awt.headless=true -Xmx2048m -Xms2048m"
mvn clean install package -Pdist -Dtar -DskipTests -Dmaven.javadoc.skip=true


Thanks,
Omkar Joshi
*Hortonworks Inc.* <http://www.hortonworks.com>


On Wed, Oct 30, 2013 at 3:39 PM, Roman Shaposhnik <rv...@apache.org> wrote:

> I can take a look sometime later today. Meantime I can only
> say that I've been running into 1Gb limit in a few builds as
> of late. These days -- I just go with 2G by default.
>
> Thanks,
> Roman.
>
> On Wed, Oct 30, 2013 at 3:33 PM, Alejandro Abdelnur <tu...@cloudera.com>
> wrote:
> > The following is happening in builds for MAPREDUCE and YARN patches.
> > I've seen the failures in hadoop5 and hadoop7 machines. I've increased
> > Maven memory to 1GB (export MAVEN_OPTS="-Xmx1024m" in the jenkins
> > jobs) but still some failures persist:
> > https://builds.apache.org/job/PreCommit-MAPREDUCE-Build/4159/
> >
> > Does anybody has an idea of what may be going on?
> >
> >
> >
> > thx
> >
> >
> > [INFO] --- native-maven-plugin:1.0-alpha-7:javah (default) @
> hadoop-common ---
> > [INFO] /bin/sh -c cd
> >
> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common
> > && /home/jenkins/tools/java/latest/bin/javah -d
> >
> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/native/javah
> > -classpath
> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/classes:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-annotations/target/classes:/home/jenkins/tools/java/jdk1.6.0_26/jre/../lib/tools.jar:/home/jenkins/.m2/repository/com/google/guava/guava/11.0.2/guava-11.0.2.jar:/home/jenkins/.m2/repository/com/google/code/findbugs/jsr305/1.3.9/jsr305-1.3.9.jar:/home/jenkins/.m2/repository/commons-cli/commons-cli/1.2/commons-cli-1.2.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-math/2.1/commons-math-2.1.jar:/home/jenkins/.m2/repository/xmlenc/xmlenc/0.52/xmlenc-0.52.jar:/home/jenkins/.m2/repository/commons-httpclient/commons-httpclient/3.1/commons-httpclient-3.1.jar:/home/jenkins/.m2/repository/commons-codec/commons-codec/1.4/commons-codec-1.4.jar:/home/jenkins/.m2/repository/commons-io/commons-io/2.1/commons-io-2.1.jar:/home/jenkins/.m2/repository/commons-net/commons-net/3.1/commons-net-3.1.jar:/home/jenkins/.m2/repository/javax/servlet/servlet-api/2.5/servlet-api-2.5.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty/6.1.26/jetty-6.1.26.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty-util/6.1.26/jetty-util-6.1.26.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-core/1.9/jersey-core-1.9.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-json/1.9/jersey-json-1.9.jar:/home/jenkins/.m2/repository/org/codehaus/jettison/jettison/1.1/jettison-1.1.jar:/home/jenkins/.m2/repository/stax/stax-api/1.0.1/stax-api-1.0.1.jar:/home/jenkins/.m2/repository/com/sun/xml/bind/jaxb-impl/2.2.3-1/jaxb-impl-2.2.3-1.jar:/home/jenkins/.m2/repository/javax/xml/bind/jaxb-api/2.2.2/jaxb-api-2.2.2.jar:/home/jenkins/.m2/repository/javax/activation/activation/1.1/activation-1.1.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-jaxrs/1.8.8/jackson-jaxrs-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-xc/1.8.8/jackson-xc-1.8.8.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-server/1.9/jersey-server-1.9.jar:/home/jenkins/.m2/repository/asm/asm/3.2/asm-3.2.jar:/home/jenkins/.m2/repository/commons-logging/commons-logging/1.1.1/commons-logging-1.1.1.jar:/home/jenkins/.m2/repository/log4j/log4j/1.2.17/log4j-1.2.17.jar:/home/jenkins/.m2/repository/net/java/dev/jets3t/jets3t/0.6.1/jets3t-0.6.1.jar:/home/jenkins/.m2/repository/commons-lang/commons-lang/2.5/commons-lang-2.5.jar:/home/jenkins/.m2/repository/commons-configuration/commons-configuration/1.6/commons-configuration-1.6.jar:/home/jenkins/.m2/repository/commons-collections/commons-collections/3.2.1/commons-collections-3.2.1.jar:/home/jenkins/.m2/repository/commons-digester/commons-digester/1.8/commons-digester-1.8.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils/1.7.0/commons-beanutils-1.7.0.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils-core/1.8.0/commons-beanutils-core-1.8.0.jar:/home/jenkins/.m2/repository/org/slf4j/slf4j-api/1.7.5/slf4j-api-1.7.5.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-core-asl/1.8.8/jackson-core-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-mapper-asl/1.8.8/jackson-mapper-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/apache/avro/avro/1.7.4/avro-1.7.4.jar:/home/jenkins/.m2/repository/com/thoughtworks/paranamer/paranamer/2.3/paranamer-2.3.jar:/home/jenkins/.m2/repository/org/xerial/snappy/snappy-java/
> 1.0.4.1/snappy-java-1.0.4.1.jar:/home/jenkins/.m2/repository/com/google/protobuf/protobuf-java/2.5.0/protobuf-java-2.5.0.jar:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-auth/target/classes:/home/jenkins/.m2/repository/com/jcraft/jsch/0.1.42/jsch-0.1.42.jar:/home/jenkins/.m2/repository/org/apache/zookeeper/zookeeper/3.4.5/zookeeper-3.4.5.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-compress/1.4.1/commons-compress-1.4.1.jar:/home/jenkins/.m2/repository/org/tukaani/xz/1.0/xz-1.0.jar
> > org.apache.hadoop.io.compress.zlib.ZlibCompressor
> > org.apache.hadoop.io.compress.zlib.ZlibDecompressor
> > org.apache.hadoop.io.compress.bzip2.Bzip2Compressor
> > org.apache.hadoop.io.compress.bzip2.Bzip2Decompressor
> > org.apache.hadoop.security.JniBasedUnixGroupsMapping
> > org.apache.hadoop.io.nativeio.NativeIO
> > org.apache.hadoop.security.JniBasedUnixGroupsNetgroupMapping
> > org.apache.hadoop.io.compress.snappy.SnappyCompressor
> > org.apache.hadoop.io.compress.snappy.SnappyDecompressor
> > org.apache.hadoop.io.compress.lz4.Lz4Compressor
> > org.apache.hadoop.io.compress.lz4.Lz4Decompressor
> > org.apache.hadoop.util.NativeCrc32
> > org.apache.hadoop.net.unix.DomainSocket
> > Error occurred during initialization of VM
> > java.lang.OutOfMemoryError: unable to create new native thread
> >
> >
> >
> > --
> > Alejandro
>

-- 
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Re: test-patch failing with OOM errors in javah

Posted by Roman Shaposhnik <rv...@apache.org>.
I can take a look sometime later today. Meantime I can only
say that I've been running into 1Gb limit in a few builds as
of late. These days -- I just go with 2G by default.

Thanks,
Roman.

On Wed, Oct 30, 2013 at 3:33 PM, Alejandro Abdelnur <tu...@cloudera.com> wrote:
> The following is happening in builds for MAPREDUCE and YARN patches.
> I've seen the failures in hadoop5 and hadoop7 machines. I've increased
> Maven memory to 1GB (export MAVEN_OPTS="-Xmx1024m" in the jenkins
> jobs) but still some failures persist:
> https://builds.apache.org/job/PreCommit-MAPREDUCE-Build/4159/
>
> Does anybody has an idea of what may be going on?
>
>
>
> thx
>
>
> [INFO] --- native-maven-plugin:1.0-alpha-7:javah (default) @ hadoop-common ---
> [INFO] /bin/sh -c cd
> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common
> && /home/jenkins/tools/java/latest/bin/javah -d
> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/native/javah
> -classpath /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/classes:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-annotations/target/classes:/home/jenkins/tools/java/jdk1.6.0_26/jre/../lib/tools.jar:/home/jenkins/.m2/repository/com/google/guava/guava/11.0.2/guava-11.0.2.jar:/home/jenkins/.m2/repository/com/google/code/findbugs/jsr305/1.3.9/jsr305-1.3.9.jar:/home/jenkins/.m2/repository/commons-cli/commons-cli/1.2/commons-cli-1.2.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-math/2.1/commons-math-2.1.jar:/home/jenkins/.m2/repository/xmlenc/xmlenc/0.52/xmlenc-0.52.jar:/home/jenkins/.m2/repository/commons-httpclient/commons-httpclient/3.1/commons-httpclient-3.1.jar:/home/jenkins/.m2/repository/commons-codec/commons-codec/1.4/commons-codec-1.4.jar:/home/jenkins/.m2/repository/commons-io/commons-io/2.1/commons-io-2.1.jar:/home/jenkins/.m2/repository/commons-net/commons-net/3.1/commons-net-3.1.jar:/home/jenkins/.m2/repository/javax/servlet/servlet-api/2.5/servlet-api-2.5.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty/6.1.26/jetty-6.1.26.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty-util/6.1.26/jetty-util-6.1.26.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-core/1.9/jersey-core-1.9.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-json/1.9/jersey-json-1.9.jar:/home/jenkins/.m2/repository/org/codehaus/jettison/jettison/1.1/jettison-1.1.jar:/home/jenkins/.m2/repository/stax/stax-api/1.0.1/stax-api-1.0.1.jar:/home/jenkins/.m2/repository/com/sun/xml/bind/jaxb-impl/2.2.3-1/jaxb-impl-2.2.3-1.jar:/home/jenkins/.m2/repository/javax/xml/bind/jaxb-api/2.2.2/jaxb-api-2.2.2.jar:/home/jenkins/.m2/repository/javax/activation/activation/1.1/activation-1.1.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-jaxrs/1.8.8/jackson-jaxrs-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-xc/1.8.8/jackson-xc-1.8.8.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-server/1.9/jersey-server-1.9.jar:/home/jenkins/.m2/repository/asm/asm/3.2/asm-3.2.jar:/home/jenkins/.m2/repository/commons-logging/commons-logging/1.1.1/commons-logging-1.1.1.jar:/home/jenkins/.m2/repository/log4j/log4j/1.2.17/log4j-1.2.17.jar:/home/jenkins/.m2/repository/net/java/dev/jets3t/jets3t/0.6.1/jets3t-0.6.1.jar:/home/jenkins/.m2/repository/commons-lang/commons-lang/2.5/commons-lang-2.5.jar:/home/jenkins/.m2/repository/commons-configuration/commons-configuration/1.6/commons-configuration-1.6.jar:/home/jenkins/.m2/repository/commons-collections/commons-collections/3.2.1/commons-collections-3.2.1.jar:/home/jenkins/.m2/repository/commons-digester/commons-digester/1.8/commons-digester-1.8.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils/1.7.0/commons-beanutils-1.7.0.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils-core/1.8.0/commons-beanutils-core-1.8.0.jar:/home/jenkins/.m2/repository/org/slf4j/slf4j-api/1.7.5/slf4j-api-1.7.5.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-core-asl/1.8.8/jackson-core-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-mapper-asl/1.8.8/jackson-mapper-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/apache/avro/avro/1.7.4/avro-1.7.4.jar:/home/jenkins/.m2/repository/com/thoughtworks/paranamer/paranamer/2.3/paranamer-2.3.jar:/home/jenkins/.m2/repository/org/xerial/snappy/snappy-java/1.0.4.1/snappy-java-1.0.4.1.jar:/home/jenkins/.m2/repository/com/google/protobuf/protobuf-java/2.5.0/protobuf-java-2.5.0.jar:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-auth/target/classes:/home/jenkins/.m2/repository/com/jcraft/jsch/0.1.42/jsch-0.1.42.jar:/home/jenkins/.m2/repository/org/apache/zookeeper/zookeeper/3.4.5/zookeeper-3.4.5.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-compress/1.4.1/commons-compress-1.4.1.jar:/home/jenkins/.m2/repository/org/tukaani/xz/1.0/xz-1.0.jar
> org.apache.hadoop.io.compress.zlib.ZlibCompressor
> org.apache.hadoop.io.compress.zlib.ZlibDecompressor
> org.apache.hadoop.io.compress.bzip2.Bzip2Compressor
> org.apache.hadoop.io.compress.bzip2.Bzip2Decompressor
> org.apache.hadoop.security.JniBasedUnixGroupsMapping
> org.apache.hadoop.io.nativeio.NativeIO
> org.apache.hadoop.security.JniBasedUnixGroupsNetgroupMapping
> org.apache.hadoop.io.compress.snappy.SnappyCompressor
> org.apache.hadoop.io.compress.snappy.SnappyDecompressor
> org.apache.hadoop.io.compress.lz4.Lz4Compressor
> org.apache.hadoop.io.compress.lz4.Lz4Decompressor
> org.apache.hadoop.util.NativeCrc32
> org.apache.hadoop.net.unix.DomainSocket
> Error occurred during initialization of VM
> java.lang.OutOfMemoryError: unable to create new native thread
>
>
>
> --
> Alejandro

Re: test-patch failing with OOM errors in javah

Posted by Roman Shaposhnik <rv...@apache.org>.
I can take a look sometime later today. Meantime I can only
say that I've been running into 1Gb limit in a few builds as
of late. These days -- I just go with 2G by default.

Thanks,
Roman.

On Wed, Oct 30, 2013 at 3:33 PM, Alejandro Abdelnur <tu...@cloudera.com> wrote:
> The following is happening in builds for MAPREDUCE and YARN patches.
> I've seen the failures in hadoop5 and hadoop7 machines. I've increased
> Maven memory to 1GB (export MAVEN_OPTS="-Xmx1024m" in the jenkins
> jobs) but still some failures persist:
> https://builds.apache.org/job/PreCommit-MAPREDUCE-Build/4159/
>
> Does anybody has an idea of what may be going on?
>
>
>
> thx
>
>
> [INFO] --- native-maven-plugin:1.0-alpha-7:javah (default) @ hadoop-common ---
> [INFO] /bin/sh -c cd
> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common
> && /home/jenkins/tools/java/latest/bin/javah -d
> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/native/javah
> -classpath /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/classes:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-annotations/target/classes:/home/jenkins/tools/java/jdk1.6.0_26/jre/../lib/tools.jar:/home/jenkins/.m2/repository/com/google/guava/guava/11.0.2/guava-11.0.2.jar:/home/jenkins/.m2/repository/com/google/code/findbugs/jsr305/1.3.9/jsr305-1.3.9.jar:/home/jenkins/.m2/repository/commons-cli/commons-cli/1.2/commons-cli-1.2.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-math/2.1/commons-math-2.1.jar:/home/jenkins/.m2/repository/xmlenc/xmlenc/0.52/xmlenc-0.52.jar:/home/jenkins/.m2/repository/commons-httpclient/commons-httpclient/3.1/commons-httpclient-3.1.jar:/home/jenkins/.m2/repository/commons-codec/commons-codec/1.4/commons-codec-1.4.jar:/home/jenkins/.m2/repository/commons-io/commons-io/2.1/commons-io-2.1.jar:/home/jenkins/.m2/repository/commons-net/commons-net/3.1/commons-net-3.1.jar:/home/jenkins/.m2/repository/javax/servlet/servlet-api/2.5/servlet-api-2.5.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty/6.1.26/jetty-6.1.26.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty-util/6.1.26/jetty-util-6.1.26.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-core/1.9/jersey-core-1.9.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-json/1.9/jersey-json-1.9.jar:/home/jenkins/.m2/repository/org/codehaus/jettison/jettison/1.1/jettison-1.1.jar:/home/jenkins/.m2/repository/stax/stax-api/1.0.1/stax-api-1.0.1.jar:/home/jenkins/.m2/repository/com/sun/xml/bind/jaxb-impl/2.2.3-1/jaxb-impl-2.2.3-1.jar:/home/jenkins/.m2/repository/javax/xml/bind/jaxb-api/2.2.2/jaxb-api-2.2.2.jar:/home/jenkins/.m2/repository/javax/activation/activation/1.1/activation-1.1.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-jaxrs/1.8.8/jackson-jaxrs-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-xc/1.8.8/jackson-xc-1.8.8.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-server/1.9/jersey-server-1.9.jar:/home/jenkins/.m2/repository/asm/asm/3.2/asm-3.2.jar:/home/jenkins/.m2/repository/commons-logging/commons-logging/1.1.1/commons-logging-1.1.1.jar:/home/jenkins/.m2/repository/log4j/log4j/1.2.17/log4j-1.2.17.jar:/home/jenkins/.m2/repository/net/java/dev/jets3t/jets3t/0.6.1/jets3t-0.6.1.jar:/home/jenkins/.m2/repository/commons-lang/commons-lang/2.5/commons-lang-2.5.jar:/home/jenkins/.m2/repository/commons-configuration/commons-configuration/1.6/commons-configuration-1.6.jar:/home/jenkins/.m2/repository/commons-collections/commons-collections/3.2.1/commons-collections-3.2.1.jar:/home/jenkins/.m2/repository/commons-digester/commons-digester/1.8/commons-digester-1.8.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils/1.7.0/commons-beanutils-1.7.0.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils-core/1.8.0/commons-beanutils-core-1.8.0.jar:/home/jenkins/.m2/repository/org/slf4j/slf4j-api/1.7.5/slf4j-api-1.7.5.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-core-asl/1.8.8/jackson-core-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-mapper-asl/1.8.8/jackson-mapper-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/apache/avro/avro/1.7.4/avro-1.7.4.jar:/home/jenkins/.m2/repository/com/thoughtworks/paranamer/paranamer/2.3/paranamer-2.3.jar:/home/jenkins/.m2/repository/org/xerial/snappy/snappy-java/1.0.4.1/snappy-java-1.0.4.1.jar:/home/jenkins/.m2/repository/com/google/protobuf/protobuf-java/2.5.0/protobuf-java-2.5.0.jar:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-auth/target/classes:/home/jenkins/.m2/repository/com/jcraft/jsch/0.1.42/jsch-0.1.42.jar:/home/jenkins/.m2/repository/org/apache/zookeeper/zookeeper/3.4.5/zookeeper-3.4.5.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-compress/1.4.1/commons-compress-1.4.1.jar:/home/jenkins/.m2/repository/org/tukaani/xz/1.0/xz-1.0.jar
> org.apache.hadoop.io.compress.zlib.ZlibCompressor
> org.apache.hadoop.io.compress.zlib.ZlibDecompressor
> org.apache.hadoop.io.compress.bzip2.Bzip2Compressor
> org.apache.hadoop.io.compress.bzip2.Bzip2Decompressor
> org.apache.hadoop.security.JniBasedUnixGroupsMapping
> org.apache.hadoop.io.nativeio.NativeIO
> org.apache.hadoop.security.JniBasedUnixGroupsNetgroupMapping
> org.apache.hadoop.io.compress.snappy.SnappyCompressor
> org.apache.hadoop.io.compress.snappy.SnappyDecompressor
> org.apache.hadoop.io.compress.lz4.Lz4Compressor
> org.apache.hadoop.io.compress.lz4.Lz4Decompressor
> org.apache.hadoop.util.NativeCrc32
> org.apache.hadoop.net.unix.DomainSocket
> Error occurred during initialization of VM
> java.lang.OutOfMemoryError: unable to create new native thread
>
>
>
> --
> Alejandro

Re: test-patch failing with OOM errors in javah

Posted by Roman Shaposhnik <rv...@apache.org>.
I can take a look sometime later today. Meantime I can only
say that I've been running into 1Gb limit in a few builds as
of late. These days -- I just go with 2G by default.

Thanks,
Roman.

On Wed, Oct 30, 2013 at 3:33 PM, Alejandro Abdelnur <tu...@cloudera.com> wrote:
> The following is happening in builds for MAPREDUCE and YARN patches.
> I've seen the failures in hadoop5 and hadoop7 machines. I've increased
> Maven memory to 1GB (export MAVEN_OPTS="-Xmx1024m" in the jenkins
> jobs) but still some failures persist:
> https://builds.apache.org/job/PreCommit-MAPREDUCE-Build/4159/
>
> Does anybody has an idea of what may be going on?
>
>
>
> thx
>
>
> [INFO] --- native-maven-plugin:1.0-alpha-7:javah (default) @ hadoop-common ---
> [INFO] /bin/sh -c cd
> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common
> && /home/jenkins/tools/java/latest/bin/javah -d
> /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/native/javah
> -classpath /home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-common/target/classes:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-annotations/target/classes:/home/jenkins/tools/java/jdk1.6.0_26/jre/../lib/tools.jar:/home/jenkins/.m2/repository/com/google/guava/guava/11.0.2/guava-11.0.2.jar:/home/jenkins/.m2/repository/com/google/code/findbugs/jsr305/1.3.9/jsr305-1.3.9.jar:/home/jenkins/.m2/repository/commons-cli/commons-cli/1.2/commons-cli-1.2.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-math/2.1/commons-math-2.1.jar:/home/jenkins/.m2/repository/xmlenc/xmlenc/0.52/xmlenc-0.52.jar:/home/jenkins/.m2/repository/commons-httpclient/commons-httpclient/3.1/commons-httpclient-3.1.jar:/home/jenkins/.m2/repository/commons-codec/commons-codec/1.4/commons-codec-1.4.jar:/home/jenkins/.m2/repository/commons-io/commons-io/2.1/commons-io-2.1.jar:/home/jenkins/.m2/repository/commons-net/commons-net/3.1/commons-net-3.1.jar:/home/jenkins/.m2/repository/javax/servlet/servlet-api/2.5/servlet-api-2.5.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty/6.1.26/jetty-6.1.26.jar:/home/jenkins/.m2/repository/org/mortbay/jetty/jetty-util/6.1.26/jetty-util-6.1.26.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-core/1.9/jersey-core-1.9.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-json/1.9/jersey-json-1.9.jar:/home/jenkins/.m2/repository/org/codehaus/jettison/jettison/1.1/jettison-1.1.jar:/home/jenkins/.m2/repository/stax/stax-api/1.0.1/stax-api-1.0.1.jar:/home/jenkins/.m2/repository/com/sun/xml/bind/jaxb-impl/2.2.3-1/jaxb-impl-2.2.3-1.jar:/home/jenkins/.m2/repository/javax/xml/bind/jaxb-api/2.2.2/jaxb-api-2.2.2.jar:/home/jenkins/.m2/repository/javax/activation/activation/1.1/activation-1.1.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-jaxrs/1.8.8/jackson-jaxrs-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-xc/1.8.8/jackson-xc-1.8.8.jar:/home/jenkins/.m2/repository/com/sun/jersey/jersey-server/1.9/jersey-server-1.9.jar:/home/jenkins/.m2/repository/asm/asm/3.2/asm-3.2.jar:/home/jenkins/.m2/repository/commons-logging/commons-logging/1.1.1/commons-logging-1.1.1.jar:/home/jenkins/.m2/repository/log4j/log4j/1.2.17/log4j-1.2.17.jar:/home/jenkins/.m2/repository/net/java/dev/jets3t/jets3t/0.6.1/jets3t-0.6.1.jar:/home/jenkins/.m2/repository/commons-lang/commons-lang/2.5/commons-lang-2.5.jar:/home/jenkins/.m2/repository/commons-configuration/commons-configuration/1.6/commons-configuration-1.6.jar:/home/jenkins/.m2/repository/commons-collections/commons-collections/3.2.1/commons-collections-3.2.1.jar:/home/jenkins/.m2/repository/commons-digester/commons-digester/1.8/commons-digester-1.8.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils/1.7.0/commons-beanutils-1.7.0.jar:/home/jenkins/.m2/repository/commons-beanutils/commons-beanutils-core/1.8.0/commons-beanutils-core-1.8.0.jar:/home/jenkins/.m2/repository/org/slf4j/slf4j-api/1.7.5/slf4j-api-1.7.5.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-core-asl/1.8.8/jackson-core-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/codehaus/jackson/jackson-mapper-asl/1.8.8/jackson-mapper-asl-1.8.8.jar:/home/jenkins/.m2/repository/org/apache/avro/avro/1.7.4/avro-1.7.4.jar:/home/jenkins/.m2/repository/com/thoughtworks/paranamer/paranamer/2.3/paranamer-2.3.jar:/home/jenkins/.m2/repository/org/xerial/snappy/snappy-java/1.0.4.1/snappy-java-1.0.4.1.jar:/home/jenkins/.m2/repository/com/google/protobuf/protobuf-java/2.5.0/protobuf-java-2.5.0.jar:/home/jenkins/jenkins-slave/workspace/PreCommit-MAPREDUCE-Build/trunk/hadoop-common-project/hadoop-auth/target/classes:/home/jenkins/.m2/repository/com/jcraft/jsch/0.1.42/jsch-0.1.42.jar:/home/jenkins/.m2/repository/org/apache/zookeeper/zookeeper/3.4.5/zookeeper-3.4.5.jar:/home/jenkins/.m2/repository/org/apache/commons/commons-compress/1.4.1/commons-compress-1.4.1.jar:/home/jenkins/.m2/repository/org/tukaani/xz/1.0/xz-1.0.jar
> org.apache.hadoop.io.compress.zlib.ZlibCompressor
> org.apache.hadoop.io.compress.zlib.ZlibDecompressor
> org.apache.hadoop.io.compress.bzip2.Bzip2Compressor
> org.apache.hadoop.io.compress.bzip2.Bzip2Decompressor
> org.apache.hadoop.security.JniBasedUnixGroupsMapping
> org.apache.hadoop.io.nativeio.NativeIO
> org.apache.hadoop.security.JniBasedUnixGroupsNetgroupMapping
> org.apache.hadoop.io.compress.snappy.SnappyCompressor
> org.apache.hadoop.io.compress.snappy.SnappyDecompressor
> org.apache.hadoop.io.compress.lz4.Lz4Compressor
> org.apache.hadoop.io.compress.lz4.Lz4Decompressor
> org.apache.hadoop.util.NativeCrc32
> org.apache.hadoop.net.unix.DomainSocket
> Error occurred during initialization of VM
> java.lang.OutOfMemoryError: unable to create new native thread
>
>
>
> --
> Alejandro