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Posted to issues@arrow.apache.org by "raulcd (via GitHub)" <gi...@apache.org> on 2023/06/01 10:54:04 UTC
[GitHub] [arrow] raulcd opened a new issue, #35869: [R][Release] U ndefined symbol _ZN5arrow6Status14AddContextLineEPKciS2_ on test-r-devdocs on maintenance branch for 12.0.1
raulcd opened a new issue, #35869:
URL: https://github.com/apache/arrow/issues/35869
### Describe the bug, including details regarding any error messages, version, and platform.
We are getting the following error:
```
> Sys.getenv("LD_LIBRARY_PATH")
[1] "/opt/R/4.1.3/lib/R/lib:/usr/local/lib:/usr/lib/x86_64-linux-gnu:/usr/lib/jvm/temurin-11-jdk-amd64/lib/server:/home/runner/work/crossbow/crossbow/dist/lib:/home/runner/work/crossbow/crossbow/dist/lib:"
> library(arrow)
Error: Error: package or namespace load failed for ‘arrow’ in dyn.load(file, DLLpath = DLLpath, ...):
unable to load shared object '/home/runner/work/_temp/Library/arrow/libs/arrow.so':
/home/runner/work/crossbow/crossbow/dist/lib/libparquet.so.1200: undefined symbol: _ZN5arrow6Status14AddContextLineEPKciS2_
Execution halted
Error: Process completed with exit code 1.
```
on the `test-r-devdocs` on Ubuntu 22.04 for the maintenance branch for 12.0.1, See:
https://github.com/ursacomputing/crossbow/actions/runs/5134779186/jobs/9256698601
### Component(s)
R, Release
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[GitHub] [arrow] raulcd commented on issue #35869: [R][Release] U ndefined symbol _ZN5arrow6Status14AddContextLineEPKciS2_ on test-r-devdocs on maintenance branch for 12.0.1
Posted by "raulcd (via GitHub)" <gi...@apache.org>.
raulcd commented on issue #35869:
URL: https://github.com/apache/arrow/issues/35869#issuecomment-1571845907
It could be, I am unsure what this job is supposed to install to be honest as I can see we install `arrow-11.0.0` on the successful MacOS one: https://github.com/ursacomputing/crossbow/actions/runs/5134779186/jobs/9256698458#step:9:2768
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[GitHub] [arrow] paleolimbot commented on issue #35869: [R][Release] U ndefined symbol _ZN5arrow6Status14AddContextLineEPKciS2_ on test-r-devdocs on maintenance branch for 12.0.1
Posted by "paleolimbot (via GitHub)" <gi...@apache.org>.
paleolimbot commented on issue #35869:
URL: https://github.com/apache/arrow/issues/35869#issuecomment-1597680187
Happy to close as a duplicate!
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[GitHub] [arrow] paleolimbot commented on issue #35869: [R][Release] U ndefined symbol _ZN5arrow6Status14AddContextLineEPKciS2_ on test-r-devdocs on maintenance branch for 12.0.1
Posted by "paleolimbot (via GitHub)" <gi...@apache.org>.
paleolimbot commented on issue #35869:
URL: https://github.com/apache/arrow/issues/35869#issuecomment-1571981686
Ah, https://github.com/apache/arrow/issues/33898
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[GitHub] [arrow] paleolimbot closed issue #35869: [R][Release] U ndefined symbol _ZN5arrow6Status14AddContextLineEPKciS2_ on test-r-devdocs on maintenance branch for 12.0.1
Posted by "paleolimbot (via GitHub)" <gi...@apache.org>.
paleolimbot closed issue #35869: [R][Release] U ndefined symbol _ZN5arrow6Status14AddContextLineEPKciS2_ on test-r-devdocs on maintenance branch for 12.0.1
URL: https://github.com/apache/arrow/issues/35869
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[GitHub] [arrow] raulcd commented on issue #35869: [R][Release] U ndefined symbol _ZN5arrow6Status14AddContextLineEPKciS2_ on test-r-devdocs on maintenance branch for 12.0.1
Posted by "raulcd (via GitHub)" <gi...@apache.org>.
raulcd commented on issue #35869:
URL: https://github.com/apache/arrow/issues/35869#issuecomment-1572208042
Thanks everyone for the feedback! I am moving this out of 12.0.1! Maybe we can close this as duplicate for #33898
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[GitHub] [arrow] raulcd commented on issue #35869: [R][Release] U ndefined symbol _ZN5arrow6Status14AddContextLineEPKciS2_ on test-r-devdocs on maintenance branch for 12.0.1
Posted by "raulcd (via GitHub)" <gi...@apache.org>.
raulcd commented on issue #35869:
URL: https://github.com/apache/arrow/issues/35869#issuecomment-1571825565
CC @thisisnic @paleolimbot @nealrichardson
hi, the `test-r-devdocs` job is failing on the maintenance branch for Ubuntu 22.04 and I am unsure whether this is due to the job being executed on the maintenance branch, before creating the RC or there's a change that hasn't been ported to the maintenance branch.
This is the only R job failing. Does anyone know what might be the issue?
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[GitHub] [arrow] nealrichardson commented on issue #35869: [R][Release] U ndefined symbol _ZN5arrow6Status14AddContextLineEPKciS2_ on test-r-devdocs on maintenance branch for 12.0.1
Posted by "nealrichardson (via GitHub)" <gi...@apache.org>.
nealrichardson commented on issue #35869:
URL: https://github.com/apache/arrow/issues/35869#issuecomment-1571857311
I have an idea of what this is, but whatever it is, it's not release blocking
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[GitHub] [arrow] thisisnic commented on issue #35869: [R][Release] U ndefined symbol _ZN5arrow6Status14AddContextLineEPKciS2_ on test-r-devdocs on maintenance branch for 12.0.1
Posted by "thisisnic (via GitHub)" <gi...@apache.org>.
thisisnic commented on issue #35869:
URL: https://github.com/apache/arrow/issues/35869#issuecomment-1571835117
I'm tempted to say that if this is the only R job failing but the other ones pass, I'm not sure it is a blocker. I've seen this job fail for unknown reasons when I've been doing the R bit of the release, and I think we just carried on, though obviously it would be good to work out why it's failing.
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[GitHub] [arrow] thisisnic commented on issue #35869: [R][Release] U ndefined symbol _ZN5arrow6Status14AddContextLineEPKciS2_ on test-r-devdocs on maintenance branch for 12.0.1
Posted by "thisisnic (via GitHub)" <gi...@apache.org>.
thisisnic commented on issue #35869:
URL: https://github.com/apache/arrow/issues/35869#issuecomment-1571839474
Could it be something to do with the fact that it looks like we're installing libarrow from the JFrog binaries, and so we're installing libarrow 12.0.0? https://github.com/ursacomputing/crossbow/actions/runs/5134779186/jobs/9256698601#step:9:4050
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[GitHub] [arrow] paleolimbot commented on issue #35869: [R][Release] U ndefined symbol _ZN5arrow6Status14AddContextLineEPKciS2_ on test-r-devdocs on maintenance branch for 12.0.1
Posted by "paleolimbot (via GitHub)" <gi...@apache.org>.
paleolimbot commented on issue #35869:
URL: https://github.com/apache/arrow/issues/35869#issuecomment-1571980112
I can't find the issue where I debugged this the last time, but that job must be building the R package (only occasionally?) with `-DARROW_EXTRA_ERROR_CONTEXT` but linking to Arrow that was not built with `ARROW_EXTRA_ERROR_CONTEXT=ON`. That has happened in that job before (I can't find the issue) and it did not cause any problems with release.
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