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Posted to commits@airavata.apache.org by la...@apache.org on 2014/01/09 17:29:29 UTC
svn commit: r1556860 - in /airavata/trunk/modules/registry:
airavata-jpa-registry/src/main/java/org/apache/airavata/persistance/registry/jpa/impl/
registry-api/src/main/java/org/apache/airavata/registry/api/
Author: lahiru
Date: Thu Jan 9 16:29:29 2014
New Revision: 1556860
URL: http://svn.apache.org/r1556860
Log:
fixing https://issues.apache.org/jira/browse/AIRAVATA-982.
Added:
airavata/trunk/modules/registry/registry-api/src/main/java/org/apache/airavata/registry/api/OrchestratorRegistry.java
Modified:
airavata/trunk/modules/registry/airavata-jpa-registry/src/main/java/org/apache/airavata/persistance/registry/jpa/impl/AiravataJPARegistry.java
airavata/trunk/modules/registry/registry-api/src/main/java/org/apache/airavata/registry/api/AiravataRegistry2.java
Modified: airavata/trunk/modules/registry/airavata-jpa-registry/src/main/java/org/apache/airavata/persistance/registry/jpa/impl/AiravataJPARegistry.java
URL: http://svn.apache.org/viewvc/airavata/trunk/modules/registry/airavata-jpa-registry/src/main/java/org/apache/airavata/persistance/registry/jpa/impl/AiravataJPARegistry.java?rev=1556860&r1=1556859&r2=1556860&view=diff
==============================================================================
--- airavata/trunk/modules/registry/airavata-jpa-registry/src/main/java/org/apache/airavata/persistance/registry/jpa/impl/AiravataJPARegistry.java (original)
+++ airavata/trunk/modules/registry/airavata-jpa-registry/src/main/java/org/apache/airavata/persistance/registry/jpa/impl/AiravataJPARegistry.java Thu Jan 9 16:29:29 2014
@@ -33,7 +33,7 @@ import java.util.Map;
import java.util.regex.Pattern;
import org.apache.airavata.common.exception.AiravataConfigurationException;
-import org.apache.airavata.common.exception.ApplicationSettingsException;
+import org.apache.airavata.common.utils.AiravataJobState;
import org.apache.airavata.common.utils.DBUtil;
import org.apache.airavata.common.utils.Version;
import org.apache.airavata.commons.gfac.type.ApplicationDescription;
@@ -2510,37 +2510,32 @@ public class AiravataJPARegistry extends
@Override
public boolean isCredentialExist(String gatewayId, String tokenId)
throws RegistryException {
+ credentialReader = new CredentialReaderImpl(getDBConnector());
try {
- credentialReader = new CredentialReaderImpl(getDBConnector());
- SSHCredential credential = (SSHCredential) credentialReader.getCredential(gatewayId, tokenId);
+ SSHCredential credential = (SSHCredential) credentialReader.getCredential(gatewayId, tokenId);
if (credential!=null) {
return true;
}
} catch(CredentialStoreException e) {
return false;
- } catch (ApplicationSettingsException e) {
- throw new RegistryException("An error occurred while creating credential reader.");
- }
- return false;
+ }
+ return false;
}
@Override
public String getCredentialPublicKey(String gatewayId, String tokenId)
throws RegistryException {
+ credentialReader = new CredentialReaderImpl(getDBConnector());
try {
- credentialReader = new CredentialReaderImpl(getDBConnector());
-
- SSHCredential credential = (SSHCredential) credentialReader.getCredential(gatewayId, tokenId);
+ SSHCredential credential = (SSHCredential) credentialReader.getCredential(gatewayId, tokenId);
if (credential!=null) {
return new String(credential.getPublicKey());
}
} catch(CredentialStoreException e) {
return null;
- } catch (ApplicationSettingsException e) {
- throw new RegistryException("An error occurred while creating credential reader");
- }
- return null;
+ }
+ return null;
}
@Override
@@ -2552,10 +2547,9 @@ public class AiravataJPARegistry extends
@Override
public String createCredential(String gatewayId, String tokenId,
String username) throws RegistryException {
-
+ credentialWriter = new SSHCredentialWriter(getDBConnector());
+ credentialGenerator = new SSHCredentialGenerator();
try {
- credentialWriter = new SSHCredentialWriter(getDBConnector());
- credentialGenerator = new SSHCredentialGenerator();
SSHCredential credential = credentialGenerator.generateCredential(tokenId);
if (credential!=null) {
credential.setGateway(gatewayId);
@@ -2566,10 +2560,8 @@ public class AiravataJPARegistry extends
}
} catch (CredentialStoreException e) {
return null;
- } catch (ApplicationSettingsException e) {
- throw new RegistryException("An error occurred while creating ssh credential writer");
- }
- return null;
+ }
+ return null;
}
private static DBUtil getDBConnector() throws RegistryException{
@@ -2594,4 +2586,53 @@ public class AiravataJPARegistry extends
throw new RegistryException("Error while accesing registrty settings ", e);
}
}
+
+ public Map<String, Integer> getGFACNodeList() throws RegistryException {
+ return null; //To change body of implemented methods use File | Settings | File Templates.
+ }
+
+ /**
+ *These are the methods inherited from Orchestrator Registry
+ */
+
+
+ public List<URI> getLiveGFacURIs() throws RegistryException {
+ return null; //To change body of implemented methods use File | Settings | File Templates.
+ }
+
+ public boolean storeExperiment(String userName, String experimentID) throws RegistryException {
+ return false; //To change body of implemented methods use File | Settings | File Templates.
+ }
+
+ public boolean changeStatus(String experimentID, AiravataJobState.State state) throws RegistryException {
+ return false; //To change body of implemented methods use File | Settings | File Templates.
+ }
+
+ public AiravataJobState getState(String experimentID) throws RegistryException {
+ return null; //To change body of implemented methods use File | Settings | File Templates.
+ }
+
+ public List<String> getAllJobsWithState(AiravataJobState state) throws RuntimeException {
+ return null; //To change body of implemented methods use File | Settings | File Templates.
+ }
+
+ public List<String> getAllAcceptedJobs() throws RegistryException {
+ return null; //To change body of implemented methods use File | Settings | File Templates.
+ }
+
+ public String fetchAcceptedJob(String experimentID) throws RegistryException {
+ return null; //To change body of implemented methods use File | Settings | File Templates.
+ }
+
+ public List<String> getAllHangedJobs() throws RegistryException {
+ return null; //To change body of implemented methods use File | Settings | File Templates.
+ }
+
+ public int getHangedJobCount() throws RegistryException {
+ return 0; //To change body of implemented methods use File | Settings | File Templates.
+ }
+
+ public boolean resetHangedJob(String experimentID) throws RegistryException {
+ return false; //To change body of implemented methods use File | Settings | File Templates.
+ }
}
Modified: airavata/trunk/modules/registry/registry-api/src/main/java/org/apache/airavata/registry/api/AiravataRegistry2.java
URL: http://svn.apache.org/viewvc/airavata/trunk/modules/registry/registry-api/src/main/java/org/apache/airavata/registry/api/AiravataRegistry2.java?rev=1556860&r1=1556859&r2=1556860&view=diff
==============================================================================
--- airavata/trunk/modules/registry/registry-api/src/main/java/org/apache/airavata/registry/api/AiravataRegistry2.java (original)
+++ airavata/trunk/modules/registry/registry-api/src/main/java/org/apache/airavata/registry/api/AiravataRegistry2.java Thu Jan 9 16:29:29 2014
@@ -27,7 +27,7 @@ import java.net.URI;
import java.util.Observable;
-public abstract class AiravataRegistry2 extends Observable implements DescriptorRegistry, ProjectsRegistry, PublishedWorkflowRegistry, UserWorkflowRegistry, ConfigurationRegistry, ProvenanceRegistry, UserRegistry, CredentialRegistry{
+public abstract class AiravataRegistry2 extends Observable implements DescriptorRegistry, ProjectsRegistry, PublishedWorkflowRegistry, UserWorkflowRegistry, ConfigurationRegistry, ProvenanceRegistry,OrchestratorRegistry, UserRegistry, CredentialRegistry{
private Gateway gateway;
private AiravataUser user;
Added: airavata/trunk/modules/registry/registry-api/src/main/java/org/apache/airavata/registry/api/OrchestratorRegistry.java
URL: http://svn.apache.org/viewvc/airavata/trunk/modules/registry/registry-api/src/main/java/org/apache/airavata/registry/api/OrchestratorRegistry.java?rev=1556860&view=auto
==============================================================================
--- airavata/trunk/modules/registry/registry-api/src/main/java/org/apache/airavata/registry/api/OrchestratorRegistry.java (added)
+++ airavata/trunk/modules/registry/registry-api/src/main/java/org/apache/airavata/registry/api/OrchestratorRegistry.java Thu Jan 9 16:29:29 2014
@@ -0,0 +1,117 @@
+/*
+ *
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements. See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership. The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied. See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ *
+*/
+package org.apache.airavata.registry.api;
+
+import org.apache.airavata.common.utils.AiravataJobState;
+import org.apache.airavata.registry.api.exception.RegistryException;
+
+import java.util.List;
+import java.util.Map;
+
+public interface OrchestratorRegistry extends AiravataSubRegistry {
+
+
+ /**
+ * this return information about GFAC instances running in the system.
+ * @return
+ * @throws RegistryException
+ */
+ Map<String, Integer> getGFACNodeList() throws RegistryException;
+
+
+ /**
+ * This method will add an entry to job management table in database
+ * With the default initial status of ACCEPTED
+ * @param userName
+ * @param experimentID
+ * @return
+ * @throws RegistryException
+ */
+ boolean storeExperiment(String userName,String experimentID)throws RegistryException;
+
+ /**
+ * This can be used to change the status to any valid status
+ * @param experimentID
+ * @param state
+ * @return
+ * @throws RegistryException
+ */
+ boolean changeStatus(String experimentID,AiravataJobState.State state)throws RegistryException;
+
+
+ /**
+ * This method can be used to seek the status of a given experiment
+ * @param experimentID
+ * @return
+ * @throws RegistryException
+ */
+ AiravataJobState getState(String experimentID)throws RegistryException;
+
+ /**
+ * This returns all the jobs with the given state
+ * @param state give any state user wants to retrieve all the experiment IDs
+ * @return
+ * @throws RuntimeException
+ */
+ List<String> getAllJobsWithState(AiravataJobState state) throws RuntimeException;
+
+ /**
+ * This will return list of experimentID of jobs which are in
+ * ACCEPTED state
+ * @return
+ * @throws RegistryException
+ */
+ List<String> getAllAcceptedJobs()throws RegistryException;
+
+ /**
+ * This will pick one job from jobs in ACCEPTED state and change its status to
+ * FETCHED
+ * @return experimentID
+ * @throws RegistryException
+ */
+ String fetchAcceptedJob(String experimentID)throws RegistryException;
+
+ /**
+ * This will return all the hanged jobs, the logic to determine
+ * whether job is hanged or not is depend on the implementation
+ * @return
+ * @throws RegistryException
+ */
+ List<String> getAllHangedJobs()throws RegistryException;
+
+ /**
+ * return the number of jobs hanged, it not normal that jobs are hanged
+ * all the time, so users can use this method before try to retrieve
+ * list of hanged jobs
+ * @return number of hanged jobs
+ * @throws RegistryException
+ */
+ int getHangedJobCount()throws RegistryException;
+
+ /**
+ * reset hanged jobs based on previous state
+ * @param experimentID
+ * @return true if operation is successful
+ * @throws RegistryException
+ */
+ boolean resetHangedJob(String experimentID)throws RegistryException;
+
+}