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Posted to commits@taverna.apache.org by st...@apache.org on 2018/06/29 12:43:09 UTC
[3/4] incubator-taverna-plugin-bioinformatics git commit: somewhat
tidy up groupId?
somewhat tidy up groupId?
Project: http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/repo
Commit: http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/commit/c3d73263
Tree: http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/tree/c3d73263
Diff: http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/diff/c3d73263
Branch: refs/heads/master
Commit: c3d73263b6ea7ee243f2d993adf5e05d2052e750
Parents: d6fbc0d
Author: Stian Soiland-Reyes <st...@apache.org>
Authored: Fri Jun 29 13:42:18 2018 +0100
Committer: Stian Soiland-Reyes <st...@apache.org>
Committed: Fri Jun 29 13:42:18 2018 +0100
----------------------------------------------------------------------
pom.xml | 135 ++++++++++++++++++++++++++++---
taverna-biomart-activity-ui/pom.xml | 28 +------
taverna-biomart-activity/pom.xml | 15 +---
taverna-biomart-martservice/pom.xml | 31 +------
taverna-biomoby-activity-ui/pom.xml | 7 +-
taverna-biomoby-activity/pom.xml | 18 ++---
taverna-ncbi-activity-ui/pom.xml | 31 ++-----
taverna-soaplab-activity-ui/pom.xml | 34 +-------
taverna-soaplab-activity/pom.xml | 33 +-------
9 files changed, 155 insertions(+), 177 deletions(-)
----------------------------------------------------------------------
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/c3d73263/pom.xml
----------------------------------------------------------------------
diff --git a/pom.xml b/pom.xml
index 604556b..c004358 100644
--- a/pom.xml
+++ b/pom.xml
@@ -20,22 +20,117 @@
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
- <parent>
- <groupId>org.apache.taverna</groupId>
- <artifactId>apache-taverna-parent</artifactId>
- <version>2-incubating</version>
- </parent>
- <groupId>org.apache.taverna.bioinformatics</groupId>
- <artifactId>apache-taverna-plugin-bioinformatics</artifactId>
- <version>3.1.0-incubating-SNAPSHOT</version>
+
+ <groupId>io.github.taverna-extras.bioinformatics</groupId>
+ <artifactId>taverna-plugin-bioinformatics</artifactId>
+ <version>3.1.0-SNAPSHOT</version>
<packaging>pom</packaging>
- <name>Apache Taverna Plugin for Bioinformatics</name>
+ <name>Bioinformatics plugin for Taverna</name>
+ <url>https://github.com/apache/incubator-taverna-plugin-bioinformatics</url>
<properties>
<taverna.language.version>0.15.1-incubating</taverna.language.version>
<taverna.osgi.version>0.2.1-incubating</taverna.osgi.version>
<taverna.engine.version>3.1.0-incubating</taverna.engine.version>
<taverna.commonactivities.version>2.1.0-incubating</taverna.commonactivities.version>
+
+ <!-- TODO: Only keep the versions needed -->
+
+ <activation.version>1.1.1</activation.version>
+ <antlr.version>2.7.7</antlr.version>
+ <apache.commons.csv.version>1.5</apache.commons.csv.version>
+ <apache.httpclient.version>4.5.3</apache.httpclient.version><!-- must be compatibe with jsonld-java/jena -->
+ <apache.httpcore.version>4.4.6</apache.httpcore.version> <!-- must match what httpclient depends on -->
+ <aspectj.version>1.6.9</aspectj.version>
+ <axis.jaxrpc.version>1.4</axis.jaxrpc.version>
+ <axis.sggj.version>1.4</axis.sggj.version>
+ <axis.version>1.4.0</axis.version>
+ <!--<axis.wsdl4j.version>1.5.1</axis.wsdl4j.version>-->
+ <batik.version>1.7.0</batik.version>
+ <bcprov.version>1.54</bcprov.version><!-- bcprov-jdk15on --><!-- bcprov-jdk15on --><!-- bcprov-jdk15on --><!-- bcprov-jdk15on -->
+ <cglib.version>2.1.3</cglib.version>
+ <commons.beanutils.version>1.9.2</commons.beanutils.version>
+ <commons.cli.version>1.4</commons.cli.version>
+ <commons.codec.version>1.10</commons.codec.version>
+ <commons.collections.version>3.2.2</commons.collections.version>
+ <commons.configuration.version>1.10</commons.configuration.version>
+ <commons.dbcp.version>1.4</commons.dbcp.version>
+ <commons.httpclient.version>3.1.0</commons.httpclient.version>
+ <commons.io.version>2.6</commons.io.version>
+ <commons.lang.version>2.6</commons.lang.version>
+ <commons.logging.version>1.1.3</commons.logging.version>
+ <commons.net.version>2.0.0</commons.net.version>
+ <dexx.collection.version>0.6</dexx.collection.version>
+ <dom4j.version>1.6.1</dom4j.version>
+ <geronimo.spec.jta.version>1.0-M1</geronimo.spec.jta.version>
+ <gson.version>1.4</gson.version>
+ <htmlparser.version>1.4</htmlparser.version>
+ <icu4j.version>3.4.4</icu4j.version>
+ <io.airlift.airline.version>0.7</io.airlift.airline.version>
+ <jackson.version>2.9.0</jackson.version> <!-- See also jsonldjava -->
+ <jai.imageio.core.version>1.3.1</jai.imageio.core.version> <!-- http://github.com/jai-imageio/ -->
+ <javahelp.version>2.0.02</javahelp.version>
+ <javax.el.version>1.0.0</javax.el.version>
+ <javax.servlet.jsp.version>2.1.0</javax.servlet.jsp.version>
+ <javax.servlet.version>2.5.0</javax.servlet.version>
+ <javax.transaction.version>1.1.0</javax.transaction.version>
+ <jaxb.version>2.2.11</jaxb.version>
+ <jaxen.version>1.1.6</jaxen.version>
+ <jaxp.ri.version>1.4</jaxp.ri.version>
+ <jaxws.api.version>2.1</jaxws.api.version>
+ <jdom.version>1.1.0</jdom.version> <!-- com.springsource.org.jdom -->
+ <jedit.syntax.version>2.2.5</jedit.syntax.version>
+ <jena.version>3.6.0</jena.version><!-- See also jsonld-java and httpcomponents -->
+ <jersey.client.version>1.19.1</jersey.client.version>
+ <jetty.version>6.1.24</jetty.version>
+ <jmimemagic.version>0.1.2</jmimemagic.version>
+ <jmoby.version>1.1.5-taverna</jmoby.version>
+ <joda-time.version>2.9.9</joda-time.version>
+ <json.lib.version>2.3</json.lib.version>
+ <jsonldjava.version>0.11.1</jsonldjava.version> <!-- upgrade from jena, sync with jackson and httpcomponents -->
+ <junit.version>4.11</junit.version>
+ <log4j.version>1.2.17</log4j.version>
+ <mail.version>1.4.1</mail.version>
+ <macify.version>1.6</macify.version>
+ <martj.version>0.6</martj.version>
+ <mimeutil.version>2.1.2-6</mimeutil.version>
+ <mockito.version>1.9.5</mockito.version>
+ <opm.version>1.1.8</opm.version>
+ <org.fife.ui.hexeditor.version>1.0.2011-07-04</org.fife.ui.hexeditor.version>
+ <org.icepdf.version>4.1.1-taverna</org.icepdf.version>
+ <org.xhtmlrenderer.core-renderer.version>R8</org.xhtmlrenderer.core-renderer.version>
+ <osgi.core.version>4.3.1</osgi.core.version>
+ <osgi.enterprise.version>4.2.0</osgi.enterprise.version>
+ <osgi.equinox.version>3.8.0.v20120529-1548</osgi.equinox.version>
+ <osgi.compendium.version>4.3.1</osgi.compendium.version>
+ <poi.ooxml.version>3.6</poi.ooxml.version>
+ <poi.version>3.6</poi.version>
+ <saxpath.version>1.0-FCS</saxpath.version>
+ <servletapi.version>2.5</servletapi.version>
+ <sesame.version>2.7.0</sesame.version>
+ <simple-jndi.version>0.11.1</simple-jndi.version>
+ <slf4j.version>1.7.20</slf4j.version>
+ <spring.dm.version>2.0.0.M1</spring.dm.version>
+ <spring.version>3.0.5.RELEASE</spring.version>
+ <stax.version>1.0</stax.version>
+ <tupelo.version>2.6</tupelo.version>
+ <xalan.version>2.7.1</xalan.version>
+ <servicemix.xerces.version>2.11.0_1</servicemix.xerces.version>
+ <xmlbeans.version>2.4.0</xmlbeans.version>
+ <xml.rpc.version>1.1.0</xml.rpc.version>
+ <xstream.version>1.4.1</xstream.version>
+
+
+
</properties>
+ <build>
+ <plugins>
+ <plugin>
+ <groupId>org.apache.felix</groupId>
+ <artifactId>maven-bundle-plugin</artifactId>
+ <extensions>true</extensions>
+ </plugin>
+ </plugins>
+ </build>
<modules>
<module>taverna-biomart-activity</module>
<module>taverna-biomart-activity-ui</module>
@@ -62,6 +157,28 @@
<enabled>false</enabled>
</releases>
</repository>
+ <repository>
+ <releases />
+ <snapshots>
+ <enabled>false</enabled>
+ </snapshots>
+ <id>mygrid-repository</id>
+ <name>myGrid Repository</name>
+ <url>http://www.mygrid.org.uk/maven/repository
+ </url>
+ </repository>
+ <repository>
+ <releases>
+ <enabled>false</enabled>
+ </releases>
+ <snapshots />
+ <id>mygrid-snapshot-repository</id>
+ <name>myGrid Snapshot Repository</name>
+ <url>http://www.mygrid.org.uk/maven/snapshot-repository</url>
+ </repository>
+ </repositories>
+
+
</repositories>
</project>
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/c3d73263/taverna-biomart-activity-ui/pom.xml
----------------------------------------------------------------------
diff --git a/taverna-biomart-activity-ui/pom.xml b/taverna-biomart-activity-ui/pom.xml
index b09936c..df1962d 100644
--- a/taverna-biomart-activity-ui/pom.xml
+++ b/taverna-biomart-activity-ui/pom.xml
@@ -20,11 +20,10 @@
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
<modelVersion>4.0.0</modelVersion>
<parent>
- <groupId>net.sf.taverna</groupId>
- <artifactId>taverna-parent</artifactId>
- <version>3.0.1-SNAPSHOT</version>
+ <groupId>io.github.taverna-extras.bioinformatics</groupId>
+ <artifactId>taverna-plugin-bioinformatics</artifactId>
+ <version>3.1.0-SNAPSHOT</version>
</parent>
- <groupId>net.sf.taverna.t2.ui-activities</groupId>
<artifactId>biomart-activity-ui</artifactId>
<version>2.0-SNAPSHOT</version>
<packaging>bundle</packaging>
@@ -87,26 +86,5 @@
<scope>test</scope>
</dependency>
</dependencies>
- <repositories>
- <repository>
- <releases />
- <snapshots>
- <enabled>false</enabled>
- </snapshots>
- <id>mygrid-repository</id>
- <name>myGrid Repository</name>
- <url>http://www.mygrid.org.uk/maven/repository
- </url>
- </repository>
- <repository>
- <releases>
- <enabled>false</enabled>
- </releases>
- <snapshots />
- <id>mygrid-snapshot-repository</id>
- <name>myGrid Snapshot Repository</name>
- <url>http://www.mygrid.org.uk/maven/snapshot-repository</url>
- </repository>
- </repositories>
</project>
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/c3d73263/taverna-biomart-activity/pom.xml
----------------------------------------------------------------------
diff --git a/taverna-biomart-activity/pom.xml b/taverna-biomart-activity/pom.xml
index 5240520..4dd54d8 100644
--- a/taverna-biomart-activity/pom.xml
+++ b/taverna-biomart-activity/pom.xml
@@ -21,13 +21,12 @@
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
<modelVersion>4.0.0</modelVersion>
<parent>
- <groupId>net.sf.taverna</groupId>
- <artifactId>taverna-parent</artifactId>
- <version>3.0.1-SNAPSHOT</version>
+ <groupId>io.github.taverna-extras.bioinformatics</groupId>
+ <artifactId>taverna-plugin-bioinformatics</artifactId>
+ <version>3.1.0-SNAPSHOT</version>
</parent>
- <groupId>net.sf.taverna.t2.activities</groupId>
- <version>2.0.1-SNAPSHOT</version>
<artifactId>biomart-activity</artifactId>
+ <version>2.0.1-SNAPSHOT</version>
<packaging>bundle</packaging>
<name>Taverna 2 Biomart Activity.</name>
<dependencies>
@@ -85,11 +84,5 @@
<url>http://www.mygrid.org.uk/maven/snapshot-repository</url>
</repository>
</repositories>
- <scm>
- <connection>scm:git:https://github.com/taverna/taverna-biomart-activity.git</connection>
- <developerConnection>scm:git:ssh://git@github.com/taverna/taverna-biomart-activity.git</developerConnection>
- <url>https://github.com/taverna/taverna-biomart-activity/</url>
- <tag>HEAD</tag>
- </scm>
</project>
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/c3d73263/taverna-biomart-martservice/pom.xml
----------------------------------------------------------------------
diff --git a/taverna-biomart-martservice/pom.xml b/taverna-biomart-martservice/pom.xml
index 7c8ae8f..8e2b0dd 100644
--- a/taverna-biomart-martservice/pom.xml
+++ b/taverna-biomart-martservice/pom.xml
@@ -21,11 +21,10 @@
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
<modelVersion>4.0.0</modelVersion>
<parent>
- <groupId>net.sf.taverna</groupId>
- <artifactId>taverna-parent</artifactId>
- <version>3.0.1-SNAPSHOT</version>
+ <groupId>io.github.taverna-extras.bioinformatics</groupId>
+ <artifactId>taverna-plugin-bioinformatics</artifactId>
+ <version>3.1.0-SNAPSHOT</version>
</parent>
- <groupId>org.biomart</groupId>
<artifactId>martservice</artifactId>
<packaging>bundle</packaging>
<name>MartService</name>
@@ -86,24 +85,6 @@
<repositories>
<repository>
- <releases />
- <snapshots>
- <enabled>false</enabled>
- </snapshots>
- <id>mygrid-repository</id>
- <name>myGrid Repository</name>
- <url>http://www.mygrid.org.uk/maven/repository</url>
- </repository>
- <repository>
- <releases>
- <enabled>false</enabled>
- </releases>
- <snapshots />
- <id>mygrid-snapshot-repository</id>
- <name>myGrid Snapshot Repository</name>
- <url>http://www.mygrid.org.uk/maven/snapshot-repository</url>
- </repository>
- <repository>
<id>com.springsource.repository.bundles.release</id>
<name>SpringSource Enterprise Bundle Repository - SpringSource Bundle Releases</name>
<url>http://repository.springsource.com/maven/bundles/release</url>
@@ -114,10 +95,4 @@
<url>http://repository.springsource.com/maven/bundles/external</url>
</repository>
</repositories>
- <scm>
- <connection>scm:git:https://github.com/taverna/taverna-biomart-martservice.git</connection>
- <developerConnection>scm:git:ssh://git@github.com:taverna/taverna-biomart-martservice.git</developerConnection>
- <url>https://github.com/taverna/taverna-biomart-martservice/</url>
- <tag>HEAD</tag>
- </scm>
</project>
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/c3d73263/taverna-biomoby-activity-ui/pom.xml
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity-ui/pom.xml b/taverna-biomoby-activity-ui/pom.xml
index 1b3fc4e..babcbb5 100644
--- a/taverna-biomoby-activity-ui/pom.xml
+++ b/taverna-biomoby-activity-ui/pom.xml
@@ -20,11 +20,10 @@
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
<modelVersion>4.0.0</modelVersion>
<parent>
- <groupId>net.sf.taverna</groupId>
- <artifactId>taverna-parent</artifactId>
- <version>3.0.1-SNAPSHOT</version>
+ <groupId>io.github.taverna-extras.bioinformatics</groupId>
+ <artifactId>taverna-plugin-bioinformatics</artifactId>
+ <version>3.1.0-SNAPSHOT</version>
</parent>
- <groupId>net.sf.taverna.t2.ui-activities</groupId>
<artifactId>biomoby-activity-ui</artifactId>
<version>2.0.1-SNAPSHOT</version>
<name>Taverna 2 Biomoby Activity UI</name>
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/c3d73263/taverna-biomoby-activity/pom.xml
----------------------------------------------------------------------
diff --git a/taverna-biomoby-activity/pom.xml b/taverna-biomoby-activity/pom.xml
index 456f1a2..bd92ee3 100644
--- a/taverna-biomoby-activity/pom.xml
+++ b/taverna-biomoby-activity/pom.xml
@@ -20,12 +20,11 @@
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
<modelVersion>4.0.0</modelVersion>
- <parent>
- <groupId>net.sf.taverna</groupId>
- <artifactId>taverna-parent</artifactId>
- <version>3.0.1-SNAPSHOT</version>
- </parent>
- <groupId>net.sf.taverna.t2.activities</groupId>
+ <parent>
+ <groupId>io.github.taverna-extras.bioinformatics</groupId>
+ <artifactId>taverna-plugin-bioinformatics</artifactId>
+ <version>3.1.0-SNAPSHOT</version>
+ </parent>
<artifactId>biomoby-activity</artifactId>
<version>2.0.1-SNAPSHOT</version>
<packaging>bundle</packaging>
@@ -150,11 +149,4 @@
<url>http://www.mygrid.org.uk/maven/snapshot-repository</url>
</repository>
</repositories>
- <scm>
- <connection>scm:git:https://github.com/taverna/taverna-biomoby-activity.git</connection>
- <developerConnection>scm:git:ssh://git@github.com/taverna/taverna-biomoby-activity.git</developerConnection>
- <url>https://github.com/taverna/taverna-biomoby-activity/</url>
- <tag>HEAD</tag>
- </scm>
-
</project>
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/c3d73263/taverna-ncbi-activity-ui/pom.xml
----------------------------------------------------------------------
diff --git a/taverna-ncbi-activity-ui/pom.xml b/taverna-ncbi-activity-ui/pom.xml
index 32fdb8b..0009b59 100644
--- a/taverna-ncbi-activity-ui/pom.xml
+++ b/taverna-ncbi-activity-ui/pom.xml
@@ -19,12 +19,11 @@
-->
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
<modelVersion>4.0.0</modelVersion>
- <parent>
- <groupId>net.sf.taverna</groupId>
- <artifactId>taverna-parent</artifactId>
- <version>3.0.1-SNAPSHOT</version>
- </parent>
- <groupId>net.sf.taverna.t2.ui-activities</groupId>
+ <parent>
+ <groupId>io.github.taverna-extras.bioinformatics</groupId>
+ <artifactId>taverna-plugin-bioinformatics</artifactId>
+ <version>3.1.0-SNAPSHOT</version>
+ </parent>
<artifactId>ncbi-activity-ui</artifactId>
<name>Taverna 2 NCBI web service Activity UI</name>
<dependencies>
@@ -42,26 +41,6 @@
<!-- testing dependencies -->
</dependencies>
- <repositories>
- <repository>
- <releases />
- <snapshots>
- <enabled>false</enabled>
- </snapshots>
- <id>mygrid-repository</id>
- <name>myGrid Repository</name>
- <url>http://www.mygrid.org.uk/maven/repository</url>
- </repository>
- <repository>
- <releases>
- <enabled>false</enabled>
- </releases>
- <snapshots />
- <id>mygrid-snapshot-repository</id>
- <name>myGrid Snapshot Repository</name>
- <url>http://www.mygrid.org.uk/maven/snapshot-repository</url>
- </repository>
- </repositories>
</project>
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/c3d73263/taverna-soaplab-activity-ui/pom.xml
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity-ui/pom.xml b/taverna-soaplab-activity-ui/pom.xml
index cedc438..f3097de 100644
--- a/taverna-soaplab-activity-ui/pom.xml
+++ b/taverna-soaplab-activity-ui/pom.xml
@@ -20,11 +20,10 @@
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
<modelVersion>4.0.0</modelVersion>
<parent>
- <groupId>net.sf.taverna</groupId>
- <artifactId>taverna-parent</artifactId>
- <version>3.0.1-SNAPSHOT</version>
+ <groupId>io.github.taverna-extras.bioinformatics</groupId>
+ <artifactId>taverna-plugin-bioinformatics</artifactId>
+ <version>3.1.0-SNAPSHOT</version>
</parent>
- <groupId>net.sf.taverna.t2.ui-activities</groupId>
<artifactId>soaplab-activity-ui</artifactId>
<version>2.0-SNAPSHOT</version>
<packaging>bundle</packaging>
@@ -89,33 +88,6 @@
<scope>test</scope>
</dependency>
</dependencies>
- <repositories>
- <repository>
- <releases />
- <snapshots>
- <enabled>false</enabled>
- </snapshots>
- <id>mygrid-repository</id>
- <name>myGrid Repository</name>
- <url>http://www.mygrid.org.uk/maven/repository
- </url>
- </repository>
- <repository>
- <releases>
- <enabled>false</enabled>
- </releases>
- <snapshots />
- <id>mygrid-snapshot-repository</id>
- <name>myGrid Snapshot Repository</name>
- <url>http://www.mygrid.org.uk/maven/snapshot-repository</url>
- </repository>
- </repositories>
- <scm>
- <connection>scm:git:https://github.com/taverna/taverna-soaplab-activity-ui.git</connection>
- <developerConnection>scm:git:ssh://git@github.com/taverna/taverna-soaplab-activity-ui.git</developerConnection>
- <url>https://github.com/taverna/taverna-soaplab-activity-ui/</url>
- <tag>HEAD</tag>
- </scm>
</project>
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/c3d73263/taverna-soaplab-activity/pom.xml
----------------------------------------------------------------------
diff --git a/taverna-soaplab-activity/pom.xml b/taverna-soaplab-activity/pom.xml
index 1a6194e..2a517da 100644
--- a/taverna-soaplab-activity/pom.xml
+++ b/taverna-soaplab-activity/pom.xml
@@ -20,11 +20,10 @@
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
<modelVersion>4.0.0</modelVersion>
<parent>
- <groupId>net.sf.taverna</groupId>
- <artifactId>taverna-parent</artifactId>
- <version>3.0.1-SNAPSHOT</version>
+ <groupId>io.github.taverna-extras.bioinformatics</groupId>
+ <artifactId>taverna-plugin-bioinformatics</artifactId>
+ <version>3.1.0-SNAPSHOT</version>
</parent>
- <groupId>net.sf.taverna.t2.activities</groupId>
<artifactId>soaplab-activity</artifactId>
<packaging>bundle</packaging>
<name>Taverna 2 Soaplab Activity</name>
@@ -67,32 +66,6 @@
<scope>test</scope>
</dependency>
</dependencies>
- <repositories>
- <repository>
- <releases />
- <snapshots>
- <enabled>false</enabled>
- </snapshots>
- <id>mygrid-repository</id>
- <name>myGrid Repository</name>
- <url>http://www.mygrid.org.uk/maven/repository</url>
- </repository>
- <repository>
- <releases>
- <enabled>false</enabled>
- </releases>
- <snapshots />
- <id>mygrid-snapshot-repository</id>
- <name>myGrid Snapshot Repository</name>
- <url>http://www.mygrid.org.uk/maven/snapshot-repository</url>
- </repository>
- </repositories>
- <scm>
- <connection>scm:git:https://github.com/taverna/taverna-soaplab-activity.git</connection>
- <developerConnection>scm:git:ssh://git@github.com:taverna/taverna-soaplab-activity.git</developerConnection>
- <url>https://github.com/taverna/taverna-soaplab-activity</url>
- <tag>HEAD</tag>
- </scm>
</project>