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Posted to issues@spark.apache.org by "Sameer Farooqui (JIRA)" <ji...@apache.org> on 2014/11/14 02:35:34 UTC
[jira] [Created] (SPARK-4395) Running a Spark SQL SELECT command
from PySpark causes a hang for ~ 1 hour
Sameer Farooqui created SPARK-4395:
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Summary: Running a Spark SQL SELECT command from PySpark causes a hang for ~ 1 hour
Key: SPARK-4395
URL: https://issues.apache.org/jira/browse/SPARK-4395
Project: Spark
Issue Type: Bug
Affects Versions: 1.2.0
Environment: version 1.2.0-SNAPSHOT
Reporter: Sameer Farooqui
When I run this command it hangs for one to many hours and then finally returns with successful results:
>>> sqlContext.sql("SELECT * FROM RatingsTable limit 5").collect()
Note, the lab environment below is still active, so let me know if you'd like to just access it directly.
+++ My Environment +++
- 1-node cluster in Amazon
- RedHat 6.5 64-bit
- java version "1.7.0_67"
- SBT version: sbt-0.13.5
- Scala version: scala-2.11.2
Ran:
sudo yum -y update
git clone https://github.com/apache/spark
sudo sbt assembly
+++ Data file used +++
http://blueplastic.com/databricks/movielens/ratings.dat
+++ Code ran +++
>>> import re
>>> import string
>>> from pyspark.sql import SQLContext, Row
>>> sqlContext = SQLContext(sc)
>>> RATINGS_PATTERN = '^(\d+)::(\d+)::(\d+)::(\d+)'
>>>
>>> def parse_ratings_line(line):
... match = re.search(RATINGS_PATTERN, line)
... if match is None:
... # Optionally, you can change this to just ignore if each line of data is not critical.
... raise Error("Invalid logline: %s" % logline)
... return Row(
... UserID = int(match.group(1)),
... MovieID = int(match.group(2)),
... Rating = int(match.group(3)),
... Timestamp = int(match.group(4)))
...
>>> ratings_base_RDD = (sc.textFile("file:///home/ec2-user/movielens/ratings.dat")
... # Call the parse_apace_log_line function on each line.
... .map(parse_ratings_line)
... # Caches the objects in memory since they will be queried multiple times.
... .cache())
>>> ratings_base_RDD.count()
1000209
>>> ratings_base_RDD.first()
Row(MovieID=1193, Rating=5, Timestamp=978300760, UserID=1)
>>> schemaRatings = sqlContext.inferSchema(ratings_base_RDD)
>>> schemaRatings.registerTempTable("RatingsTable")
>>> sqlContext.sql("SELECT * FROM RatingsTable limit 5").collect()
(Now the Python shell hangs...)
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