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Posted to issues@spark.apache.org by "Abdeali Kothari (JIRA)" <ji...@apache.org> on 2018/11/15 03:44:00 UTC
[jira] [Created] (SPARK-26067) Pandas GROUPED_MAP udf breaks if DF
has >255 columns
Abdeali Kothari created SPARK-26067:
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Summary: Pandas GROUPED_MAP udf breaks if DF has >255 columns
Key: SPARK-26067
URL: https://issues.apache.org/jira/browse/SPARK-26067
Project: Spark
Issue Type: Bug
Components: PySpark
Affects Versions: 2.4.0, 2.3.2
Reporter: Abdeali Kothari
When I run spark's Pandas GROUPED_MAP udfs to apply a UDAF i wrote in pythohn/pandas on a grouped dataframe in spark - it fails if the number of columns is greater than 255 in Pytohn 3.6 and lower.
{code:java}
import pyspark
from pyspark.sql import types as T, functions as F
spark = pyspark.sql.SparkSession.builder.getOrCreate()
df = spark.createDataFrame(
[[i for i in range(256)], [i+1 for i in range(256)]], schema=["a" + str(i) for i in range(256)])
new_schema = T.StructType([
field for field in df.schema] + [T.StructField("new_row", T.DoubleType())])
def myfunc(df):
df['new_row'] = 1
return df
myfunc_udf = F.pandas_udf(new_schema, F.PandasUDFType.GROUPED_MAP)(myfunc)
df2 = df.groupBy(["a1"]).apply(myfunc_udf)
print(df2.count()) # This FAILS
# ERROR:
# Caused by: org.apache.spark.api.python.PythonException: Traceback (most recent call last):
# File "/usr/local/hadoop/spark2.3.1/python/lib/pyspark.zip/pyspark/worker.py", line 219, in main
# func, profiler, deserializer, serializer = read_udfs(pickleSer, infile, eval_type)
# File "/usr/local/hadoop/spark2.3.1/python/lib/pyspark.zip/pyspark/worker.py", line 148, in read_udfs
# mapper = eval(mapper_str, udfs)
# File "<string>", line 1
# SyntaxError: more than 255 arguments
{code}
I believe thhis is happening because internally this creates a UDF with inputs as every column in the DF.
https://github.com/apache/spark/blob/41c2227a2318029709553a588e44dee28f106350/python/pyspark/sql/group.py#L274
Note: In Python 3.7 the 255 limit was raised, but I have not tried with Pytohn 3.7 ...https://docs.python.org/3.7/whatsnew/3.7.html#other-language-changes
I was using Python 3.5 (from anaconda), Spark 2.3.1 to reproduce thihs on my Hadoop Linux cluster and also on my Mac standalone spark installation.
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