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Posted to mapreduce-issues@hadoop.apache.org by "Hadoop QA (JIRA)" <ji...@apache.org> on 2015/05/18 14:24:01 UTC
[jira] [Commented] (MAPREDUCE-5965) Hadoop streaming throws error
if list of input files is high. Error is: "error=7, Argument list too long
at if number of input file is high"
[ https://issues.apache.org/jira/browse/MAPREDUCE-5965?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=14547929#comment-14547929 ]
Hadoop QA commented on MAPREDUCE-5965:
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| (x) *{color:red}-1 overall{color}* |
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|| Vote || Subsystem || Runtime || Comment ||
| {color:blue}0{color} | pre-patch | 15m 10s | Pre-patch trunk compilation is healthy. |
| {color:green}+1{color} | @author | 0m 0s | The patch does not contain any @author tags. |
| {color:red}-1{color} | tests included | 0m 0s | The patch doesn't appear to include any new or modified tests. Please justify why no new tests are needed for this patch. Also please list what manual steps were performed to verify this patch. |
| {color:green}+1{color} | javac | 7m 48s | There were no new javac warning messages. |
| {color:green}+1{color} | javadoc | 9m 47s | There were no new javadoc warning messages. |
| {color:green}+1{color} | release audit | 0m 21s | The applied patch does not increase the total number of release audit warnings. |
| {color:green}+1{color} | checkstyle | 0m 25s | There were no new checkstyle issues. |
| {color:green}+1{color} | whitespace | 0m 0s | The patch has no lines that end in whitespace. |
| {color:green}+1{color} | install | 1m 34s | mvn install still works. |
| {color:green}+1{color} | eclipse:eclipse | 0m 33s | The patch built with eclipse:eclipse. |
| {color:green}+1{color} | findbugs | 0m 42s | The patch does not introduce any new Findbugs (version 2.0.3) warnings. |
| {color:green}+1{color} | tools/hadoop tests | 6m 14s | Tests passed in hadoop-streaming. |
| | | 42m 37s | |
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|| Subsystem || Report/Notes ||
| Patch URL | http://issues.apache.org/jira/secure/attachment/12733519/MAPREDUCE-5965.2.patch |
| Optional Tests | javadoc javac unit findbugs checkstyle |
| git revision | trunk / 363c355 |
| hadoop-streaming test log | https://builds.apache.org/job/PreCommit-MAPREDUCE-Build/5741/artifact/patchprocess/testrun_hadoop-streaming.txt |
| Test Results | https://builds.apache.org/job/PreCommit-MAPREDUCE-Build/5741/testReport/ |
| Java | 1.7.0_55 |
| uname | Linux asf903.gq1.ygridcore.net 3.13.0-36-lowlatency #63-Ubuntu SMP PREEMPT Wed Sep 3 21:56:12 UTC 2014 x86_64 x86_64 x86_64 GNU/Linux |
| Console output | https://builds.apache.org/job/PreCommit-MAPREDUCE-Build/5741/console |
This message was automatically generated.
> Hadoop streaming throws error if list of input files is high. Error is: "error=7, Argument list too long at if number of input file is high"
> --------------------------------------------------------------------------------------------------------------------------------------------
>
> Key: MAPREDUCE-5965
> URL: https://issues.apache.org/jira/browse/MAPREDUCE-5965
> Project: Hadoop Map/Reduce
> Issue Type: Bug
> Reporter: Arup Malakar
> Assignee: Arup Malakar
> Attachments: MAPREDUCE-5965.1.patch, MAPREDUCE-5965.2.patch, MAPREDUCE-5965.patch
>
>
> Hadoop streaming exposes all the key values in job conf as environment variables when it forks a process for streaming code to run. Unfortunately the variable mapreduce_input_fileinputformat_inputdir contains the list of input files, and Linux has a limit on size of environment variables + arguments.
> Based on how long the list of files and their full path is this could be pretty huge. And given all of these variables are not even used it stops user from running hadoop job with large number of files, even though it could be run.
> Linux throws E2BIG if the size is greater than certain size which is error code 7. And java translates that to "error=7, Argument list too long". More: http://man7.org/linux/man-pages/man2/execve.2.html I suggest skipping variables if it is greater than certain length. That way if user code requires the environment variable it would fail. It should also introduce a config variable to skip long variables, and set it to false by default. That way user has to specifically set it to true to invoke this feature.
> Here is the exception:
> {code}
> Error: java.lang.RuntimeException: Error in configuring object at org.apache.hadoop.util.ReflectionUtils.setJobConf(ReflectionUtils.java:109) at org.apache.hadoop.util.ReflectionUtils.setConf(ReflectionUtils.java:75) at org.apache.hadoop.util.ReflectionUtils.newInstance(ReflectionUtils.java:133) at org.apache.hadoop.mapred.MapTask.runOldMapper(MapTask.java:426) at org.apache.hadoop.mapred.MapTask.run(MapTask.java:342) at org.apache.hadoop.mapred.YarnChild$2.run(YarnChild.java:168) at java.security.AccessController.doPrivileged(Native Method) at javax.security.auth.Subject.doAs(Subject.java:415) at org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1548) at org.apache.hadoop.mapred.YarnChild.main(YarnChild.java:163) Caused by: java.lang.reflect.InvocationTargetException at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:606) at org.apache.hadoop.util.ReflectionUtils.setJobConf(ReflectionUtils.java:106) ... 9 more Caused by: java.lang.RuntimeException: Error in configuring object at org.apache.hadoop.util.ReflectionUtils.setJobConf(ReflectionUtils.java:109) at org.apache.hadoop.util.ReflectionUtils.setConf(ReflectionUtils.java:75) at org.apache.hadoop.util.ReflectionUtils.newInstance(ReflectionUtils.java:133) at org.apache.hadoop.mapred.MapRunner.configure(MapRunner.java:38) ... 14 more Caused by: java.lang.reflect.InvocationTargetException at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:606) at org.apache.hadoop.util.ReflectionUtils.setJobConf(ReflectionUtils.java:106) ... 17 more Caused by: java.lang.RuntimeException: configuration exception at org.apache.hadoop.streaming.PipeMapRed.configure(PipeMapRed.java:222) at org.apache.hadoop.streaming.PipeMapper.configure(PipeMapper.java:66) ... 22 more Caused by: java.io.IOException: Cannot run program "/data/hadoop/hadoop-yarn/cache/yarn/nm-local-dir/usercache/oo-analytics/appcache/application_1403599726264_13177/container_1403599726264_13177_01_000006/./rbenv_runner.sh": error=7, Argument list too long at java.lang.ProcessBuilder.start(ProcessBuilder.java:1041) at org.apache.hadoop.streaming.PipeMapRed.configure(PipeMapRed.java:209) ... 23 more Caused by: java.io.IOException: error=7, Argument list too long at java.lang.UNIXProcess.forkAndExec(Native Method) at java.lang.UNIXProcess.<init>(UNIXProcess.java:135) at java.lang.ProcessImpl.start(ProcessImpl.java:130) at java.lang.ProcessBuilder.start(ProcessBuilder.java:1022) ... 24 more Container killed by the ApplicationMaster. Container killed on request. Exit code is 143 Container exited with a non-zero exit code 143
> {code}
> Hive does a similar trick: HIVE-2372 I have a patch for this, will soon submit a patch.
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