UIMA ConceptMapper in Pear Package

[Joachim Wermter <Jo...@uni-jena.de>]

Hi,

I checked out the Sandbox ConceptMapper from the SVN repository and, after
adjusting a couple of file paths (in the ConceptMapperOffsetTokenizer.xml,
created a PEAR package out of the project, with OffsetTokenizerMatcher.xml
being the PEAR component descriptor. When trying to install the PEAR (on a
Windows machine), I get the following ClassNotFound Exception below. I really
double- and triple-checked all classpath issues inside the PEAR setenv.txt and
elsewhere, and I have no clue as to why this happens.
Any help would be greatly appreciated!

Joachim


Verification of ConceptMapper failed =>
 org.apache.uima.resource.ResourceInitializationException: Initialization of
annotator class "org.apache.uima.conceptMapper.ConceptMapper" failed. 
(Descriptor:
file:/C:/Users/jwermter/Desktop/PearInstalled/ConceptMapper/desc/analysis_engine/primitive/ConceptMapperOffsetTokenizer.xml)
	at
org.apache.uima.analysis_engine.impl.PrimitiveAnalysisEngine_impl.initializeAnalysisComponent(PrimitiveAnalysisEngine_impl.java:253)
	at
org.apache.uima.analysis_engine.impl.PrimitiveAnalysisEngine_impl.initialize(PrimitiveAnalysisEngine_impl.java:157)
	at
org.apache.uima.impl.AnalysisEngineFactory_impl.produceResource(AnalysisEngineFactory_impl.java:94)
	at
org.apache.uima.impl.CompositeResourceFactory_impl.produceResource(CompositeResourceFactory_impl.java:62)
	at org.apache.uima.UIMAFramework.produceResource(UIMAFramework.java:258)
	at org.apache.uima.UIMAFramework.produceAnalysisEngine(UIMAFramework.java:352)
	at org.apache.uima.analysis_engine.asb.impl.ASB_impl.setup(ASB_impl.java:243)
	at
org.apache.uima.analysis_engine.impl.AggregateAnalysisEngine_impl.initASB(AggregateAnalysisEngine_impl.java:413)
	at
org.apache.uima.analysis_engine.impl.AggregateAnalysisEngine_impl.initializeAggregateAnalysisEngine(AggregateAnalysisEngine_impl.java:361)
	at
org.apache.uima.analysis_engine.impl.AggregateAnalysisEngine_impl.initialize(AggregateAnalysisEngine_impl.java:183)
	at
org.apache.uima.impl.AnalysisEngineFactory_impl.produceResource(AnalysisEngineFactory_impl.java:94)
	at
org.apache.uima.impl.CompositeResourceFactory_impl.produceResource(CompositeResourceFactory_impl.java:62)
	at org.apache.uima.UIMAFramework.produceResource(UIMAFramework.java:258)
	at org.apache.uima.UIMAFramework.produceResource(UIMAFramework.java:303)
	at org.apache.uima.UIMAFramework.produceAnalysisEngine(UIMAFramework.java:383)
	at
org.apache.uima.pear.tools.InstallationTester.testAnalysisEngine(InstallationTester.java:219)
	at
org.apache.uima.pear.tools.InstallationTester.doTest(InstallationTester.java:114)
	at
org.apache.uima.pear.tools.InstallationController.verifyComponentInstallation(InstallationController.java:1110)
	at
org.apache.uima.pear.tools.InstallationController.verifyComponent(InstallationController.java:1993)
	at
org.apache.uima.tools.pear.install.InstallPear.installPear(InstallPear.java:388)
	at
org.apache.uima.tools.pear.install.InstallPear.access$000(InstallPear.java:79)
	at
org.apache.uima.tools.pear.install.InstallPear$RunInstallation.run(InstallPear.java:108)
	at java.lang.Thread.run(Thread.java:619)
Caused by: org.apache.uima.resource.ResourceInitializationException
	at
org.apache.uima.analysis_engine.impl.compatibility.AnnotatorAdapter.initialize(AnnotatorAdapter.java:113)
	at
org.apache.uima.analysis_engine.impl.PrimitiveAnalysisEngine_impl.initializeAnalysisComponent(PrimitiveAnalysisEngine_impl.java:251)
	... 22 more
Caused by:
org.apache.uima.analysis_engine.annotator.AnnotatorConfigurationException
	at
org.apache.uima.conceptMapper.ConceptMapper.initialize(ConceptMapper.java:343)
	at
org.apache.uima.analysis_engine.impl.compatibility.AnnotatorAdapter.initialize(AnnotatorAdapter.java:109)
	... 23 more
Caused by: org.apache.uima.resource.ResourceInitializationException
	at
org.apache.uima.conceptMapper.support.dictionaryResource.DictionaryResource_impl.loadDictionaryContents(DictionaryResource_impl.java:278)
	at
org.apache.uima.conceptMapper.ConceptMapper.initialize(ConceptMapper.java:335)
	... 24 more
Caused by:
org.apache.uima.conceptMapper.support.dictionaryResource.DictionaryLoaderException:
org.apache.uima.resource.ResourceInitializationException: Annotator class
"org.apache.uima.conceptMapper.support.tokenizer.OffsetTokenizer" was not
found. (Descriptor:
file:/C:/Users/jwermter/Desktop/PearInstalled/ConceptMapper/desc/analysis_engine/primitive/OffsetTokenizer.xml)
	at
org.apache.uima.conceptMapper.support.dictionaryResource.annotatorAdaptor.AnnotatorAdaptor.initCPM(AnnotatorAdaptor.java:93)
	at
org.apache.uima.conceptMapper.support.dictionaryResource.DictionaryResource_impl$DictLoader.setDictionary(DictionaryResource_impl.java:939)
	at
org.apache.uima.conceptMapper.support.dictionaryResource.DictionaryResource_impl.loadDictionaryContents(DictionaryResource_impl.java:263)
	... 25 more
Caused by: org.apache.uima.resource.ResourceInitializationException: Annotator
class "org.apache.uima.conceptMapper.support.tokenizer.OffsetTokenizer" was not
found. (Descriptor:
file:/C:/Users/jwermter/Desktop/PearInstalled/ConceptMapper/desc/analysis_engine/primitive/OffsetTokenizer.xml)
	at
org.apache.uima.analysis_engine.impl.PrimitiveAnalysisEngine_impl.initializeAnalysisComponent(PrimitiveAnalysisEngine_impl.java:208)
	at
org.apache.uima.analysis_engine.impl.PrimitiveAnalysisEngine_impl.initialize(PrimitiveAnalysisEngine_impl.java:157)
	at
org.apache.uima.impl.AnalysisEngineFactory_impl.produceResource(AnalysisEngineFactory_impl.java:94)
	at
org.apache.uima.impl.CompositeResourceFactory_impl.produceResource(CompositeResourceFactory_impl.java:62)
	at org.apache.uima.UIMAFramework.produceResource(UIMAFramework.java:258)
	at org.apache.uima.UIMAFramework.produceAnalysisEngine(UIMAFramework.java:326)
	at
org.apache.uima.conceptMapper.support.dictionaryResource.annotatorAdaptor.AnnotatorAdaptor.initCPM(AnnotatorAdaptor.java:90)
	... 27 more
Caused by: java.lang.ClassNotFoundException:
org.apache.uima.conceptMapper.support.tokenizer.OffsetTokenizer
	at java.net.URLClassLoader$1.run(URLClassLoader.java:200)
	at java.security.AccessController.doPrivileged(Native Method)
	at java.net.URLClassLoader.findClass(URLClassLoader.java:188)
	at java.lang.ClassLoader.loadClass(ClassLoader.java:307)
	at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:301)
	at java.lang.ClassLoader.loadClass(ClassLoader.java:252)
	at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:320)
	at java.lang.Class.forName0(Native Method)
	at java.lang.Class.forName(Class.java:169)
	at
org.apache.uima.analysis_engine.impl.PrimitiveAnalysisEngine_impl.initializeAnalysisComponent(PrimitiveAnalysisEngine_impl.java:205)
	... 33 more


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