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Posted to commits@hudi.apache.org by GitBox <gi...@apache.org> on 2022/05/03 11:32:57 UTC
[GitHub] [hudi] santoshsb commented on issue #5452: Schema Evolution: Missing column for previous records when new entry does not have the same while upsert.
santoshsb commented on issue #5452:
URL: https://github.com/apache/hudi/issues/5452#issuecomment-1115996169
@xiarixiaoyao FYI, we just tested this issue by building the release branch 0.11.0, here is the JSON string and the schema.
`{
"resourceType": "Patient",
"id": "596c7a94-bada-4303-85d4-7067c586999e",
"lastUpdated": "2022-04-20T15:18:18.90836+05:30",
"source": "4a0701fe-5c3b-482b-895d-875fcbd2148a",
"name": [
{
"use": "official",
"family": "Haley279",
"given": [
"Vinita997"
]
}
],
"gender": "female",
"birthDate": "2005-08-30",
"multipleBirthBoolean": false,
"communication": [
{
"language": {
"coding": [
{
"system": "urn:ietf:bcp:47",
"code": "en-US",
"display": "English"
}
],
"text": "English"
}
}
]
}`
SCHEMA
scala> hudiPatientDF.printSchema
root
|-- _hoodie_commit_time: string (nullable = true)
|-- _hoodie_commit_seqno: string (nullable = true)
|-- _hoodie_record_key: string (nullable = true)
|-- _hoodie_partition_path: string (nullable = true)
|-- _hoodie_file_name: string (nullable = true)
|-- birthDate: string (nullable = true)
|-- communication: array (nullable = true)
| |-- element: struct (containsNull = true)
| | |-- language: struct (nullable = true)
| | | |-- coding: array (nullable = true)
| | | | |-- element: struct (containsNull = true)
| | | | | |-- code: string (nullable = true)
| | | | | |-- display: string (nullable = true)
| | | | | |-- system: string (nullable = true)
| | | |-- text: string (nullable = true)
|-- gender: string (nullable = true)
|-- id: string (nullable = true)
|-- lastUpdated: string (nullable = true)
|-- multipleBirthBoolean: boolean (nullable = true)
|-- name: array (nullable = true)
| |-- element: struct (containsNull = true)
| | |-- family: string (nullable = true)
| | |-- given: array (nullable = true)
| | | |-- element: string (containsNull = true)
| | |-- use: string (nullable = true)
|-- resourceType: string (nullable = true)
|-- source: string (nullable = true)
We inserted the above JSON string and Updated the same, and it threw the following error which is same as above.
`Caused by: org.apache.hudi.exception.HoodieException: unable to read next record from parquet file
at org.apache.hudi.common.util.ParquetReaderIterator.hasNext(ParquetReaderIterator.java:53)
at org.apache.hudi.common.util.queue.IteratorBasedQueueProducer.produce(IteratorBasedQueueProducer.java:45)
at org.apache.hudi.common.util.queue.BoundedInMemoryExecutor.lambda$null$0(BoundedInMemoryExecutor.java:105)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
... 4 more
Caused by: org.apache.parquet.io.InvalidRecordException: Parquet/Avro schema mismatch: Avro field 'coding' not found
at org.apache.parquet.avro.AvroRecordConverter.getAvroField(AvroRecordConverter.java:221)
at org.apache.parquet.avro.AvroRecordConverter.<init>(AvroRecordConverter.java:126)
at org.apache.parquet.avro.AvroRecordConverter.newConverter(AvroRecordConverter.java:284)
at org.apache.parquet.avro.AvroRecordConverter.newConverter(AvroRecordConverter.java:228)
at org.apache.parquet.avro.AvroRecordConverter.access$100(AvroRecordConverter.java:74)
at org.apache.parquet.avro.AvroRecordConverter$AvroCollectionConverter$ElementConverter.<init>(AvroRecordConverter.java:539)
at org.apache.parquet.avro.AvroRecordConverter$AvroCollectionConverter.<init>(AvroRecordConverter.java:489)
at org.apache.parquet.avro.AvroRecordConverter.newConverter(AvroRecordConverter.java:293)
at org.apache.parquet.avro.AvroRecordConverter.<init>(AvroRecordConverter.java:137)
at org.apache.parquet.avro.AvroRecordConverter.<init>(AvroRecordConverter.java:91)
at org.apache.parquet.avro.AvroRecordMaterializer.<init>(AvroRecordMaterializer.java:33)
at org.apache.parquet.avro.AvroReadSupport.prepareForRead(AvroReadSupport.java:142)
at org.apache.parquet.hadoop.InternalParquetRecordReader.initialize(InternalParquetRecordReader.java:185)
at org.apache.parquet.hadoop.ParquetReader.initReader(ParquetReader.java:156)
at org.apache.parquet.hadoop.ParquetReader.read(ParquetReader.java:135)
at org.apache.hudi.common.util.ParquetReaderIterator.hasNext(ParquetReaderIterator.java:48)`
Thanks,
Santosh
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