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Posted to commits@airflow.apache.org by GitBox <gi...@apache.org> on 2020/08/17 12:03:47 UTC
[GitHub] [airflow] FloChehab opened a new issue #10362: Airflow 1.10.12rc1, KubernetesPodOperator broken with secret & deploy_type "volume"
FloChehab opened a new issue #10362:
URL: https://github.com/apache/airflow/issues/10362
**Apache Airflow version**: 1.10.12rc1
**Kubernetes version (if you are using kubernetes)** (use `kubectl version`): v1.16.11-gke.5
**Environment**:
I am using the official docker image with the helm chart in this repo (with really minor tweaks). Config is pretty close to default.
Docker image: `apache/airflow:v1-10-test-python3.8` (exact: `apache/airflow@sha256:53ac5c6f7df40c886cd1918f40d7802fd57e90f60cfaacc9c66f1f0f56890af4`)
- **Cloud provider or hardware configuration**: /
- **OS** (e.g. from /etc/os-release): /
- **Kernel** (e.g. `uname -a`): /
- **Install tools**: /
- **Others**: /
**What happened**:
Using the KubernetesPodOperator with one or more secrets with mount type `volume` leads to incorrect pod configuration with duplicated volumes and `mountPath` ; and as a result the pod is not schedulable.
`HTTP response body: {"kind":"Status","apiVersion":"v1","metadata":{},"status":"Failure","message":"Pod \"airflow-test-pod-88c703e254004b26b008f9a7f63e1349\" is invalid: spec.containers[0].volumeMounts[1].mountPath: Invalid value: \"/var/location\": must be unique","reason":"Invalid","details":{"name":"airflow-test-pod-88c703e254004b26b008f9a7f63e1349","kind":"Pod","causes":[{"reason":"FieldValueInvalid","message":"Invalid value: \"/var/location\": must be unique","field":"spec.containers[0].volumeMounts[1].mountPath"}]},"code":422}`
(full log is available below)
**What you expected to happen**:
To produce the correct pod configuration.
**How to reproduce it**:
Use this simple dag:
```python
from airflow.contrib.operators.kubernetes_pod_operator import KubernetesPodOperator
from airflow.kubernetes.secret import Secret
from airflow.models import DAG
from airflow.utils.dates import days_ago
default_args = {
'owner': 'Airflow',
'start_date': days_ago(2)
}
with DAG(
dag_id='bug_secret',
default_args=default_args,
schedule_interval=None
) as dag:
k = KubernetesPodOperator(
namespace='airflow',
image="ubuntu:16.04",
cmds=["bash", "-cx"],
arguments=["echo", "10"],
secrets=[Secret(
deploy_type="volume",
deploy_target="/var/location",
secret="my-secret",
key="content.json",
)],
name="airflow-test-pod",
task_id="task",
get_logs=True,
is_delete_operator_pod=True,
)
```
**Anything else we need to know**:
On the one hand, if I had to guess, I'd say that the issues comes from this PR https://github.com/apache/airflow/pull/10084 . On the other hand, this feature seems to be unittested, so I don't really understand what is going on.
<details><summary>Task execution logs</summary>
```txt
[2020-08-17 11:52:57,525] {taskinstance.py:901} INFO - Executing <Task(KubernetesPodOperator): task> on 2020-08-17T11:50:46.676804+00:00
[2020-08-17 11:52:57,530] {standard_task_runner.py:54} INFO - Started process 3401 to run task
[2020-08-17 11:52:57,578] {standard_task_runner.py:77} INFO - Running: ['airflow', 'run', 'bug_secret', 'task', '2020-08-17T11:50:46.676804+00:00', '--job_id', '3', '--pool', 'default_pool', '--raw', '-sd', 'DAGS_FOLDER/bug_secret.py', '--cfg_path', '/tmp/tmp8motpeb_']
[2020-08-17 11:52:57,579] {standard_task_runner.py:78} INFO - Job 3: Subtask task
[2020-08-17 11:52:57,639] {logging_mixin.py:112} INFO - Running %s on host %s <TaskInstance: bug_secret.task 2020-08-17T11:50:46.676804+00:00 [running]> airflow-scheduler-0.airflow-scheduler.dev-airflow-helm.svc.cluster.local
[2020-08-17 11:52:57,789] {logging_mixin.py:112} WARNING - /home/airflow/.local/lib/python3.8/site-packages/airflow/kubernetes/pod_launcher.py:309: DeprecationWarning: Using `airflow.contrib.kubernetes.pod.Pod` is deprecated. Please use `k8s.V1Pod`.
dummy_pod = Pod(
[2020-08-17 11:52:57,789] {logging_mixin.py:112} WARNING - /home/airflow/.local/lib/python3.8/site-packages/airflow/kubernetes/pod_launcher.py:77: DeprecationWarning: Using `airflow.contrib.kubernetes.pod.Pod` is deprecated. Please use `k8s.V1Pod` instead.
pod = self._mutate_pod_backcompat(pod)
[2020-08-17 11:52:57,845] {pod_launcher.py:88} ERROR - Exception when attempting to create Namespaced Pod: {
"apiVersion": "v1",
"kind": "Pod",
"metadata": {
"labels": {
"airflow_version": "1.10.12",
"kubernetes_pod_operator": "True",
"dag_id": "bug_secret",
"task_id": "task",
"execution_date": "2020-08-17T115046.6768040000-0d7e92426",
"try_number": "2"
},
"name": "airflow-test-pod-151ddf3a60fc4cc4981d2390c4e4b4ce",
"namespace": "airflow"
},
"spec": {
"affinity": {},
"containers": [
{
"args": [
"echo",
"10"
],
"command": [
"bash",
"-cx"
],
"env": [],
"image": "ubuntu:16.04",
"imagePullPolicy": "IfNotPresent",
"name": "base",
"resources": {
"limits": {},
"requests": {}
},
"volumeMounts": [
{
"mountPath": "/var/location",
"name": "secretvold175d8b5-89b6-4ed4-957b-ff997a029463",
"readOnly": true
},
{
"mountPath": "/var/location",
"name": "secretvole148d425-b284-410b-87b0-b0049fed1de5",
"readOnly": true
}
]
}
],
"hostNetwork": false,
"imagePullSecrets": [],
"initContainers": [],
"restartPolicy": "Never",
"securityContext": {},
"serviceAccountName": "default",
"tolerations": [],
"volumes": [
{
"name": "secretvold175d8b5-89b6-4ed4-957b-ff997a029463",
"secret": {
"secretName": "my-secret"
}
},
{
"name": "secretvole148d425-b284-410b-87b0-b0049fed1de5",
"secret": {
"secretName": "secretvold175d8b5-89b6-4ed4-957b-ff997a029463"
}
}
]
}
}
Traceback (most recent call last):
File "/home/airflow/.local/lib/python3.8/site-packages/airflow/kubernetes/pod_launcher.py", line 84, in run_pod_async
resp = self._client.create_namespaced_pod(body=sanitized_pod,
File "/home/airflow/.local/lib/python3.8/site-packages/kubernetes/client/api/core_v1_api.py", line 6174, in create_namespaced_pod
(data) = self.create_namespaced_pod_with_http_info(namespace, body, **kwargs) # noqa: E501
File "/home/airflow/.local/lib/python3.8/site-packages/kubernetes/client/api/core_v1_api.py", line 6251, in create_namespaced_pod_with_http_info
return self.api_client.call_api(
File "/home/airflow/.local/lib/python3.8/site-packages/kubernetes/client/api_client.py", line 340, in call_api
return self.__call_api(resource_path, method,
File "/home/airflow/.local/lib/python3.8/site-packages/kubernetes/client/api_client.py", line 172, in __call_api
response_data = self.request(
File "/home/airflow/.local/lib/python3.8/site-packages/kubernetes/client/api_client.py", line 382, in request
return self.rest_client.POST(url,
File "/home/airflow/.local/lib/python3.8/site-packages/kubernetes/client/rest.py", line 272, in POST
return self.request("POST", url,
File "/home/airflow/.local/lib/python3.8/site-packages/kubernetes/client/rest.py", line 231, in request
raise ApiException(http_resp=r)
kubernetes.client.rest.ApiException: (422)
Reason: Unprocessable Entity
HTTP response headers: HTTPHeaderDict({'Audit-Id': 'fb7acb18-2ead-4c92-ac27-953133e57f83', 'Cache-Control': 'no-cache, private', 'Content-Type': 'application/json', 'Date': 'Mon, 17 Aug 2020 11:52:57 GMT', 'Content-Length': '518'})
HTTP response body: {"kind":"Status","apiVersion":"v1","metadata":{},"status":"Failure","message":"Pod \"airflow-test-pod-151ddf3a60fc4cc4981d2390c4e4b4ce\" is invalid: spec.containers[0].volumeMounts[1].mountPath: Invalid value: \"/var/location\": must be unique","reason":"Invalid","details":{"name":"airflow-test-pod-151ddf3a60fc4cc4981d2390c4e4b4ce","kind":"Pod","causes":[{"reason":"FieldValueInvalid","message":"Invalid value: \"/var/location\": must be unique","field":"spec.containers[0].volumeMounts[1].mountPath"}]},"code":422}
[2020-08-17 11:52:57,873] {taskinstance.py:1150} ERROR - (422)
Reason: Unprocessable Entity
HTTP response headers: HTTPHeaderDict({'Audit-Id': 'fb7acb18-2ead-4c92-ac27-953133e57f83', 'Cache-Control': 'no-cache, private', 'Content-Type': 'application/json', 'Date': 'Mon, 17 Aug 2020 11:52:57 GMT', 'Content-Length': '518'})
HTTP response body: {"kind":"Status","apiVersion":"v1","metadata":{},"status":"Failure","message":"Pod \"airflow-test-pod-151ddf3a60fc4cc4981d2390c4e4b4ce\" is invalid: spec.containers[0].volumeMounts[1].mountPath: Invalid value: \"/var/location\": must be unique","reason":"Invalid","details":{"name":"airflow-test-pod-151ddf3a60fc4cc4981d2390c4e4b4ce","kind":"Pod","causes":[{"reason":"FieldValueInvalid","message":"Invalid value: \"/var/location\": must be unique","field":"spec.containers[0].volumeMounts[1].mountPath"}]},"code":422}
Traceback (most recent call last):
File "/home/airflow/.local/lib/python3.8/site-packages/airflow/models/taskinstance.py", line 984, in _run_raw_task
result = task_copy.execute(context=context)
File "/home/airflow/.local/lib/python3.8/site-packages/airflow/contrib/operators/kubernetes_pod_operator.py", line 284, in execute
final_state, _, result = self.create_new_pod_for_operator(labels, launcher)
File "/home/airflow/.local/lib/python3.8/site-packages/airflow/contrib/operators/kubernetes_pod_operator.py", line 400, in create_new_pod_for_operator
launcher.start_pod(
File "/home/airflow/.local/lib/python3.8/site-packages/airflow/kubernetes/pod_launcher.py", line 135, in start_pod
resp = self.run_pod_async(pod)
File "/home/airflow/.local/lib/python3.8/site-packages/airflow/kubernetes/pod_launcher.py", line 90, in run_pod_async
raise e
File "/home/airflow/.local/lib/python3.8/site-packages/airflow/kubernetes/pod_launcher.py", line 84, in run_pod_async
resp = self._client.create_namespaced_pod(body=sanitized_pod,
File "/home/airflow/.local/lib/python3.8/site-packages/kubernetes/client/api/core_v1_api.py", line 6174, in create_namespaced_pod
(data) = self.create_namespaced_pod_with_http_info(namespace, body, **kwargs) # noqa: E501
File "/home/airflow/.local/lib/python3.8/site-packages/kubernetes/client/api/core_v1_api.py", line 6251, in create_namespaced_pod_with_http_info
return self.api_client.call_api(
File "/home/airflow/.local/lib/python3.8/site-packages/kubernetes/client/api_client.py", line 340, in call_api
return self.__call_api(resource_path, method,
File "/home/airflow/.local/lib/python3.8/site-packages/kubernetes/client/api_client.py", line 172, in __call_api
response_data = self.request(
File "/home/airflow/.local/lib/python3.8/site-packages/kubernetes/client/api_client.py", line 382, in request
return self.rest_client.POST(url,
File "/home/airflow/.local/lib/python3.8/site-packages/kubernetes/client/rest.py", line 272, in POST
return self.request("POST", url,
File "/home/airflow/.local/lib/python3.8/site-packages/kubernetes/client/rest.py", line 231, in request
raise ApiException(http_resp=r)
kubernetes.client.rest.ApiException: (422)
Reason: Unprocessable Entity
HTTP response headers: HTTPHeaderDict({'Audit-Id': 'fb7acb18-2ead-4c92-ac27-953133e57f83', 'Cache-Control': 'no-cache, private', 'Content-Type': 'application/json', 'Date': 'Mon, 17 Aug 2020 11:52:57 GMT', 'Content-Length': '518'})
HTTP response body: {"kind":"Status","apiVersion":"v1","metadata":{},"status":"Failure","message":"Pod \"airflow-test-pod-151ddf3a60fc4cc4981d2390c4e4b4ce\" is invalid: spec.containers[0].volumeMounts[1].mountPath: Invalid value: \"/var/location\": must be unique","reason":"Invalid","details":{"name":"airflow-test-pod-151ddf3a60fc4cc4981d2390c4e4b4ce","kind":"Pod","causes":[{"reason":"FieldValueInvalid","message":"Invalid value: \"/var/location\": must be unique","field":"spec.containers[0].volumeMounts[1].mountPath"}]},"code":422}
```
</details>
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[GitHub] [airflow] boring-cyborg[bot] commented on issue #10362: Airflow 1.10.12rc1, KubernetesPodOperator broken with secret & deploy_type "volume"
Posted by GitBox <gi...@apache.org>.
boring-cyborg[bot] commented on issue #10362:
URL: https://github.com/apache/airflow/issues/10362#issuecomment-674840843
Thanks for opening your first issue here! Be sure to follow the issue template!
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[GitHub] [airflow] kaxil edited a comment on issue #10362: Airflow 1.10.12rc1, KubernetesPodOperator broken with secret & deploy_type "volume"
Posted by GitBox <gi...@apache.org>.
kaxil edited a comment on issue #10362:
URL: https://github.com/apache/airflow/issues/10362#issuecomment-675132778
Unfortunately, the PR hasn't passed the tests, so we will have to wait for tomorrow to cut rc2.
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[GitHub] [airflow] FloChehab edited a comment on issue #10362: Airflow 1.10.12rc1, KubernetesPodOperator broken with secret & deploy_type "volume"
Posted by GitBox <gi...@apache.org>.
FloChehab edited a comment on issue #10362:
URL: https://github.com/apache/airflow/issues/10362#issuecomment-674904511
I am trying to pin point exactly where this mutation happens in my case, I'll come back once I have more info to share.
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[GitHub] [airflow] FloChehab commented on issue #10362: Airflow 1.10.12rc1, KubernetesPodOperator broken with secret & deploy_type "volume"
Posted by GitBox <gi...@apache.org>.
FloChehab commented on issue #10362:
URL: https://github.com/apache/airflow/issues/10362#issuecomment-675561848
> @FloChehab Thank you for testing our RC! :D
You are welcome !
I was wondering if there is any mailing lists with RC announcements ? So that I can keep inform and test things "on time". Or maybe, I should join slack ?
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[GitHub] [airflow] kaxil commented on issue #10362: Airflow 1.10.12rc1, KubernetesPodOperator broken with secret & deploy_type "volume"
Posted by GitBox <gi...@apache.org>.
kaxil commented on issue #10362:
URL: https://github.com/apache/airflow/issues/10362#issuecomment-675009686
Awesome, we will create 1.10.12rc2 in an hour
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[GitHub] [airflow] kaxil commented on issue #10362: Airflow 1.10.12rc1, KubernetesPodOperator broken with secret & deploy_type "volume"
Posted by GitBox <gi...@apache.org>.
kaxil commented on issue #10362:
URL: https://github.com/apache/airflow/issues/10362#issuecomment-674890085
hmm there are duplicate "MountPaths", do you specify this VolumeMounts anywhere else like in pod_mutation_hook ?
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[GitHub] [airflow] dimberman commented on issue #10362: Airflow 1.10.12rc1, KubernetesPodOperator broken with secret & deploy_type "volume"
Posted by GitBox <gi...@apache.org>.
dimberman commented on issue #10362:
URL: https://github.com/apache/airflow/issues/10362#issuecomment-674985991
@FloChehab thank you for bringing this to our attention. I've pushed a fix here https://github.com/apache/airflow/commit/1ad6ec43439cb1781176e567d3c7fab813404f1f
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[GitHub] [airflow] FloChehab commented on issue #10362: Airflow 1.10.12rc1, KubernetesPodOperator broken with secret & deploy_type "volume"
Posted by GitBox <gi...@apache.org>.
FloChehab commented on issue #10362:
URL: https://github.com/apache/airflow/issues/10362#issuecomment-674894783
Hi @kaxil, I am running things with default everything basically (but with the chart from the master branch if this can have impact).
I've tried to reproduce the bug following the testing on kubernetes guide but I can't do it. It seems to work.
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[GitHub] [airflow] FloChehab commented on issue #10362: Airflow 1.10.12rc1, KubernetesPodOperator broken with secret & deploy_type "volume"
Posted by GitBox <gi...@apache.org>.
FloChehab commented on issue #10362:
URL: https://github.com/apache/airflow/issues/10362#issuecomment-674926967
I've removed all calls to `settings.pod_mutation_hook` and I still get the error.
Also I am getting a bunch of ```DeprecationWarning: Using `airflow.contrib.kubernetes.pod.Pod` is deprecated. Please use `k8s.V1Pod`.```: I am not sure if this is suppose to happen since I am not doing anything fancy in the dag above.
Finally, the mutation happens either on line 97 https://github.com/apache/airflow/blob/v1-10-test/airflow/kubernetes/pod_launcher.py#L97 or line 103. I am not really familiar with debugging internal airflow code and my iteration setup is not ideal. Can you confirm the bug ?
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[GitHub] [airflow] FloChehab commented on issue #10362: Airflow 1.10.12rc1, KubernetesPodOperator broken with secret & deploy_type "volume"
Posted by GitBox <gi...@apache.org>.
FloChehab commented on issue #10362:
URL: https://github.com/apache/airflow/issues/10362#issuecomment-674931078
I am using the chart as is, with the following "custom" values:
```yaml
---
###################
# Sub charts config
postgresql:
persistence:
enabled: true
redis:
persistence:
enabled: false
########################
# Airflow chart config
images:
airflow:
repository: image
tag: some tag
pullPolicy: Always
workers:
persistence:
enabled: true
size: 8Gi
# doesn't play nicely with rbac
webserver:
defaultUser:
enabled: false
env:
- name: "AIRFLOW__WEBSERVER__RBAC"
value: "False"
- name: "AIRFLOW__API__AUTH_BACKEND"
value: "airflow.api.auth.backend.default"
```
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[GitHub] [airflow] FloChehab commented on issue #10362: Airflow 1.10.12rc1, KubernetesPodOperator broken with secret & deploy_type "volume"
Posted by GitBox <gi...@apache.org>.
FloChehab commented on issue #10362:
URL: https://github.com/apache/airflow/issues/10362#issuecomment-675571475
Done, thanks for the info !
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[GitHub] [airflow] FloChehab commented on issue #10362: Airflow 1.10.12rc1, KubernetesPodOperator broken with secret & deploy_type "volume"
Posted by GitBox <gi...@apache.org>.
FloChehab commented on issue #10362:
URL: https://github.com/apache/airflow/issues/10362#issuecomment-675008416
The fix has solved this particular issue @dimberman ! Thanks
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[GitHub] [airflow] kaxil commented on issue #10362: Airflow 1.10.12rc1, KubernetesPodOperator broken with secret & deploy_type "volume"
Posted by GitBox <gi...@apache.org>.
kaxil commented on issue #10362:
URL: https://github.com/apache/airflow/issues/10362#issuecomment-674928911
The following is just warning not an actual error so should be fine.
```
DeprecationWarning: Using `airflow.contrib.kubernetes.pod.Pod` is deprecated. Please use `k8s.V1Pod`.
```
Do you use the chart as it is? i.e do you alter Mutation settings or anything else?
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[GitHub] [airflow] kaxil edited a comment on issue #10362: Airflow 1.10.12rc1, KubernetesPodOperator broken with secret & deploy_type "volume"
Posted by GitBox <gi...@apache.org>.
kaxil edited a comment on issue #10362:
URL: https://github.com/apache/airflow/issues/10362#issuecomment-675132778
Unfortunately, the PR hasn't passed the tests, so we will have to wait for tomorrow to cur rc2.
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[GitHub] [airflow] dimberman commented on issue #10362: Airflow 1.10.12rc1, KubernetesPodOperator broken with secret & deploy_type "volume"
Posted by GitBox <gi...@apache.org>.
dimberman commented on issue #10362:
URL: https://github.com/apache/airflow/issues/10362#issuecomment-675558588
@FloChehab Thank you for testing our RC! :D
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[GitHub] [airflow] FloChehab commented on issue #10362: Airflow 1.10.12rc1, KubernetesPodOperator broken with secret & deploy_type "volume"
Posted by GitBox <gi...@apache.org>.
FloChehab commented on issue #10362:
URL: https://github.com/apache/airflow/issues/10362#issuecomment-674987715
Thanks @dimberman , I'll build an image with this fix and I'll test it asap.
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[GitHub] [airflow] FloChehab commented on issue #10362: Airflow 1.10.12rc1, KubernetesPodOperator broken with secret & deploy_type "volume"
Posted by GitBox <gi...@apache.org>.
FloChehab commented on issue #10362:
URL: https://github.com/apache/airflow/issues/10362#issuecomment-674904511
I am trying to pin point exactly where this mutation happen in my case, I'll come back once I have more info to share.
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[GitHub] [airflow] dimberman closed issue #10362: Airflow 1.10.12rc1, KubernetesPodOperator broken with secret & deploy_type "volume"
Posted by GitBox <gi...@apache.org>.
dimberman closed issue #10362:
URL: https://github.com/apache/airflow/issues/10362
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[GitHub] [airflow] FloChehab commented on issue #10362: Airflow 1.10.12rc1, KubernetesPodOperator broken with secret & deploy_type "volume"
Posted by GitBox <gi...@apache.org>.
FloChehab commented on issue #10362:
URL: https://github.com/apache/airflow/issues/10362#issuecomment-675557523
Thanks a lot !
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[GitHub] [airflow] kaxil commented on issue #10362: Airflow 1.10.12rc1, KubernetesPodOperator broken with secret & deploy_type "volume"
Posted by GitBox <gi...@apache.org>.
kaxil commented on issue #10362:
URL: https://github.com/apache/airflow/issues/10362#issuecomment-675132778
Unfortunately, the PR hasn't passed the tests, so we will have to wait for tomorrow.
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[GitHub] [airflow] kaxil commented on issue #10362: Airflow 1.10.12rc1, KubernetesPodOperator broken with secret & deploy_type "volume"
Posted by GitBox <gi...@apache.org>.
kaxil commented on issue #10362:
URL: https://github.com/apache/airflow/issues/10362#issuecomment-675565185
Yes for sure, Check http://airflow.apache.org/community/
Send an email to dev-subscribe@airflow.apache.org to subscribe to Dev mailing list where this is announced
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[GitHub] [airflow] kaxil commented on issue #10362: Airflow 1.10.12rc1, KubernetesPodOperator broken with secret & deploy_type "volume"
Posted by GitBox <gi...@apache.org>.
kaxil commented on issue #10362:
URL: https://github.com/apache/airflow/issues/10362#issuecomment-674932227
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[GitHub] [airflow] dimberman commented on issue #10362: Airflow 1.10.12rc1, KubernetesPodOperator broken with secret & deploy_type "volume"
Posted by GitBox <gi...@apache.org>.
dimberman commented on issue #10362:
URL: https://github.com/apache/airflow/issues/10362#issuecomment-675553704
Issue should be fixed for RC2 with this PR ^
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