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Posted to reviews@spark.apache.org by srowen <gi...@git.apache.org> on 2017/01/04 12:00:37 UTC

[GitHub] spark pull request #15018: [SPARK-17455][MLlib] Improve PAVA implementation ...

Github user srowen commented on a diff in the pull request:

    https://github.com/apache/spark/pull/15018#discussion_r94571308
  
    --- Diff: mllib/src/main/scala/org/apache/spark/mllib/regression/IsotonicRegression.scala ---
    @@ -328,74 +336,81 @@ class IsotonicRegression private (private var isotonic: Boolean) extends Seriali
           return Array.empty
         }
     
    -    // Pools sub array within given bounds assigning weighted average value to all elements.
    -    def pool(input: Array[(Double, Double, Double)], start: Int, end: Int): Unit = {
    -      val poolSubArray = input.slice(start, end + 1)
     
    -      val weightedSum = poolSubArray.map(lp => lp._1 * lp._3).sum
    -      val weight = poolSubArray.map(_._3).sum
    +    // Keeps track of the start and end indices of the blocks. if [i, j] is a valid block from
    +    // input(i) to input(j) (inclusive), then blockBounds(i) = j and blockBounds(j) = i
    +    val blockBounds = Array.range(0, input.length) // Initially, each data point is its own block
     
    -      var i = start
    -      while (i <= end) {
    -        input(i) = (weightedSum / weight, input(i)._2, input(i)._3)
    -        i = i + 1
    -      }
    +    // Keep track of the sum of weights and sum of weight * y for each block. weights(start)
    +    // gives the values for the block. Entries that are not at the start of a block
    +    // are meaningless.
    +    val weights: Array[(Double, Double)] = input.map {
    +      case (_, _, weight) if weight == 0d =>
    --- End diff --
    
    I'd always write 0.0 instead of 0d for clarity. I also think we want an `IllegalArgumentException`, so maybe:
    
    ```
    val weights = input.map { case (y, _, weight) =>
      require(weight > 0.0)
      (weight, weight * y)
    }
    ```


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