[03/31] incubator-taverna-language git commit: Basic Commands

[st...@apache.org]

Basic Commands

Project: http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/repo
Commit: http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/commit/8e93a3f8
Tree: http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/tree/8e93a3f8
Diff: http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/diff/8e93a3f8

Branch: refs/heads/master
Commit: 8e93a3f85f94bb767273dd41670de4a3bf000b8c
Parents: ddd1245
Author: Menaka <me...@gmail.com>
Authored: Sun Jun 7 21:52:31 2015 +0530
Committer: Stian Soiland-Reyes <st...@apache.org>
Committed: Thu Jun 11 17:33:28 2015 +0100

----------------------------------------------------------------------
 .../taverna/commandline/CommandLineTool.java    | 239 +++++++++++++++++++
 .../taverna/commandline/TavernaCommandline.java |  29 +++
 2 files changed, 268 insertions(+)
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http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/blob/8e93a3f8/taverna-language-commandline/src/main/java/org/apache/taverna/commandline/CommandLineTool.java
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diff --git a/taverna-language-commandline/src/main/java/org/apache/taverna/commandline/CommandLineTool.java b/taverna-language-commandline/src/main/java/org/apache/taverna/commandline/CommandLineTool.java
new file mode 100644
index 0000000..46af29f
--- /dev/null
+++ b/taverna-language-commandline/src/main/java/org/apache/taverna/commandline/CommandLineTool.java
@@ -0,0 +1,239 @@
+package org.apache.taverna.commandline;
+
+
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ * 
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ * 
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ */
+
+
+import io.airlift.airline.Arguments;
+import io.airlift.airline.Cli;
+import io.airlift.airline.Cli.CliBuilder;
+import io.airlift.airline.Command;
+import io.airlift.airline.Help;
+import io.airlift.airline.Option;
+
+import java.io.File;
+import java.util.List;
+
+import javax.inject.Inject;
+
+import com.google.common.base.Joiner;
+import com.google.common.collect.Lists;
+
+
+/*
+ * The command line options for convert, validate and inspect workflows.
+ * Use the airlift/airline library
+ * Author: Menaka Madushanka <me...@gmail.com>
+ * */
+
+public class CommandLineTool {
+	
+	private Cli<TvnLangTool> parser(){
+		CliBuilder<TvnLangTool> build = Cli.<TvnLangTool>builder("tvnlang")
+				.withDescription("Convert, manage workflows")
+				.withDefaultCommand(HelpCommand.class)
+				.withCommand(CommandConvert.class)
+				.withCommand(HelpCommand.class)
+				.withCommand(CommandInspect.class)
+				.withCommand(CommandValidate.class)
+				.withCommand(CommandVersion.class);
+		
+		return build.build();
+	}
+
+	public CommandLineTool(){};
+	public void parse(String... args)
+    {
+        System.out.println("$ tvnlang " + Joiner.on(" ").join(args));
+        TvnLangTool command = parser().parse(args);
+        command.execute();
+        System.out.println();
+    }
+	
+	public static abstract class TvnLangTool{
+
+		public abstract void execute();
+	}
+	
+	//placeholder for output file types
+	public static class Filetypes{
+		@Option(name= "-wfdesc", description="Convert the workflow file to wfdesc-turtle")
+		public static boolean isWfdesc = false;
+		
+		@Option(name="-wfbundel", description="Convert the workflow file to wfbundel")
+		public static boolean isWfbundel = false;
+		
+		@Option(name =  "-robundel", description = "Convert given bundel in to Research Object bundel")
+		public static boolean isRo = false;
+		
+		@Option(name= "-structure", description = "Convert the workflow into *.structure")
+		public static boolean isStructure = false;
+
+		@Option(name = "-json", description = "Convert the workflow into json")
+		public static boolean isJson = false;
+		
+		//The tool can only handle one output format at a time.
+		//Return the file type which is selected
+		public static String isTrue(){
+			if(isWfdesc) return "wfdesc";
+			else if(isWfbundel) return "wfbundel";
+			else if(isRo) return "ro";
+			else if(isStructure) return "structure";
+			else if(isJson) return "json";
+			else return null;
+		}
+		
+		
+	}
+	
+	
+	//Placeholder for optional parameters: Ex: -i, -o 
+	public static class Optional{
+		
+		//The input file or directory
+		@Option(name = {"-i", "--input"}, description="Input file/ file dir for convertion")
+		public static String in_file_dir;
+		
+		//The out put file or directory. When this is set, all the converted files will be saved into the directory that specified.
+		@Option(name = {"-o", "--output"}, description="Output file/ directory")
+		public static String out_file_dir;
+		
+		public static String getInFile(){
+			return in_file_dir;
+		}
+		
+		public static String getOutFile(){
+			return out_file_dir;
+		}
+
+//		public boolean isMulti(){
+//			return this.multi;
+//		}
+	}
+	
+	@Command(name = "help", description = "Display help information about Tvarna")
+	public static class HelpCommand extends TvnLangTool{
+		@Inject
+	    public Help help;
+
+	    @Override
+	    public void execute(){
+	    	help.call();
+	    }
+	}
+	
+	//Command for convert workflows
+	@Command(name="convert", description="Convert the given workflow")
+	public static class CommandConvert extends TvnLangTool{
+		@Inject
+		Optional optional = new Optional();
+		
+		@Inject
+		Filetypes filetypes = new Filetypes();
+		
+		@Arguments(usage = "<output format> <input files> ", description = "List of files to be converted.\n "
+				+ "Give the list of files to be converted without -i/-o and the converted files will be saved in to /converted folder in the same dir")
+        public final List<String> files = Lists.newArrayList();
+		
+		//When this is true, the command will run recursively in a directory.
+		@Option(name={"-r", "--recursive"}, description="Execute the command recursively")
+		public boolean recurse = false;
+		
+		//Option for validate the given workflow when converting
+		@Option(name = {"-V", "--validate"}, description="Validate the workflow before convert")
+		public boolean validate = false;
+		
+		@Override
+		public void execute(){
+//			
+//			if(Filetypes.isWfbundel){
+//				if(!files.isEmpty() && optional.getInFile()!=null){
+//					System.err.println("Unexpected arguments:"+" " + files.toString() + " "+ optional.getInFile());
+//					return;
+//				}
+//				File dir = new File(Optional.getInFile());
+//				File odir = new File(Optional.getOutFile());
+//				if(!odir.exists()){
+//					odir.mkdirs();
+//				}
+//				for(File f : dir.listFiles()){
+////					(new ToWfbundel(f.toString(), odir.toString())).run();
+////					System.out.println(f);
+//					
+//				}
+//					
+//			}
+			
+			
+			
+		}
+		
+	}
+	
+	//Version command
+	@Command(name="version", description = "Show version informantion")
+	public static class CommandVersion extends TvnLangTool{
+
+		@Override
+		public void execute() {
+			// TODO Auto-generated method stub
+			
+		}
+		
+	}
+	
+	//Command for inspection of workflows....!!
+	@Command(name="inspect", description="Inspect the given workflow")
+	public static class CommandInspect extends TvnLangTool{
+
+		@Inject
+		Optional optional = new Optional();
+		
+		@Option(name={"-l", "--log"}, description = "Save a results to a file")
+		public String log_file;
+		
+		@Override
+		public void execute() {
+			// TODO Auto-generated method stub
+			
+		}
+		
+	}
+	
+	//Command for validation
+	@Command(name = "validate", description = "validate the given workflow")
+	public static class CommandValidate extends TvnLangTool{
+
+		@Inject
+		Optional optional = new Optional();
+		
+		@Option(name={"-l", "--log"}, description = "Save a results to a file")
+		public String log_file;
+		
+		@Override
+		public void execute() {
+			// TODO Auto-generated method stub
+			
+		}
+		
+	}
+	
+	
+}

http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/blob/8e93a3f8/taverna-language-commandline/src/main/java/org/apache/taverna/commandline/TavernaCommandline.java
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diff --git a/taverna-language-commandline/src/main/java/org/apache/taverna/commandline/TavernaCommandline.java b/taverna-language-commandline/src/main/java/org/apache/taverna/commandline/TavernaCommandline.java
new file mode 100644
index 0000000..f7b998e
--- /dev/null
+++ b/taverna-language-commandline/src/main/java/org/apache/taverna/commandline/TavernaCommandline.java
@@ -0,0 +1,29 @@
+package org.apache.taverna.commandline;
+
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ * 
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ * 
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ */
+
+public class TavernaCommandline {
+
+	public static void main(String args[]){
+		CommandLineTool tool = new CommandLineTool();
+		tool.parse(args);
+		
+	}
+}