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Posted to commits@uima.apache.org by pk...@apache.org on 2015/10/21 14:32:02 UTC
svn commit: r1709812 - in /uima/ruta/trunk/ruta-core/src:
main/java/org/apache/uima/ruta/action/SplitAction.java
test/java/org/apache/uima/ruta/action/SplitTest.java
Author: pkluegl
Date: Wed Oct 21 12:32:02 2015
New Revision: 1709812
URL: http://svn.apache.org/viewvc?rev=1709812&view=rev
Log:
UIMA-4633
- added boundary splitting
- extended test
Modified:
uima/ruta/trunk/ruta-core/src/main/java/org/apache/uima/ruta/action/SplitAction.java
uima/ruta/trunk/ruta-core/src/test/java/org/apache/uima/ruta/action/SplitTest.java
Modified: uima/ruta/trunk/ruta-core/src/main/java/org/apache/uima/ruta/action/SplitAction.java
URL: http://svn.apache.org/viewvc/uima/ruta/trunk/ruta-core/src/main/java/org/apache/uima/ruta/action/SplitAction.java?rev=1709812&r1=1709811&r2=1709812&view=diff
==============================================================================
--- uima/ruta/trunk/ruta-core/src/main/java/org/apache/uima/ruta/action/SplitAction.java (original)
+++ uima/ruta/trunk/ruta-core/src/main/java/org/apache/uima/ruta/action/SplitAction.java Wed Oct 21 12:32:02 2015
@@ -20,6 +20,7 @@
package org.apache.uima.ruta.action;
import java.util.ArrayList;
+import java.util.Collection;
import java.util.Collections;
import java.util.List;
@@ -125,14 +126,48 @@ public class SplitAction extends Abstrac
private void splitAnnotationOnBoundary(Annotation annotation, Type typeToSplit,
boolean addToBegin, boolean addToEnd, RuleMatch match, RutaStream stream) {
- // TODO implement it
+ Collection<RutaBasic> basics = stream.getAllBasicsInWindow(annotation);
+
+ CAS cas = annotation.getCAS();
+ CasCopier cc = new CasCopier(cas, cas);
+
+ cas.removeFsFromIndexes(annotation);
+
+ int overallEnd = annotation.getEnd();
+ Annotation first = annotation;
+
+ for (RutaBasic eachBasic : basics) {
+ if (stream.isVisible(eachBasic)) {
+ boolean beginsWith = eachBasic.beginsWith(typeToSplit);
+ boolean endsWith = eachBasic.endsWith(typeToSplit);
+ if (beginsWith || endsWith) {
+ int firstEnd = beginsWith ? eachBasic.getBegin() : eachBasic.getEnd();
+ first.setEnd(firstEnd);
+ boolean valid = trimInvisible(first, stream);
+ if (valid) {
+ stream.addAnnotation(first, true, true, match);
+ }
+
+ Annotation second = (Annotation) cc.copyFs(first);
+ int secondBegin = endsWith ? eachBasic.getEnd() : eachBasic.getBegin();
+ second.setBegin(secondBegin);
+ second.setEnd(overallEnd);
+ valid = trimInvisible(second, stream);
+ if (valid) {
+ stream.addAnnotation(second, true, true, match);
+ }
+ first = second;
+ }
+ }
+ }
+
}
private boolean trimInvisible(Annotation annotation, RutaStream stream) {
List<RutaBasic> basics = new ArrayList<>(stream.getAllBasicsInWindow(annotation));
int min = annotation.getEnd();
int max = annotation.getBegin();
-
+
for (RutaBasic each : basics) {
if (stream.isVisible(each)) {
min = Math.min(min, each.getBegin());
Modified: uima/ruta/trunk/ruta-core/src/test/java/org/apache/uima/ruta/action/SplitTest.java
URL: http://svn.apache.org/viewvc/uima/ruta/trunk/ruta-core/src/test/java/org/apache/uima/ruta/action/SplitTest.java?rev=1709812&r1=1709811&r2=1709812&view=diff
==============================================================================
--- uima/ruta/trunk/ruta-core/src/test/java/org/apache/uima/ruta/action/SplitTest.java (original)
+++ uima/ruta/trunk/ruta-core/src/test/java/org/apache/uima/ruta/action/SplitTest.java Wed Oct 21 12:32:02 2015
@@ -41,133 +41,255 @@ import org.junit.Test;
public class SplitTest {
- @Test
- public void testDefault() {
- String document = "Some text. More text , with 1 , and more. even more text.";
- String script = "PERIOD #{-> T1} PERIOD;";
- script += " #{-> T1} PERIOD;";
- script += "T1{CONTAINS(NUM)-> CREATE(Complex, \"number\"= NUM)};";
- script += "Complex{-> SPLIT(COMMA)};";
-
- Map<String, String> typeMap = new TreeMap<String, String>();
- String typeName = "Complex";
- typeMap.put(typeName, "uima.tcas.Annotation");
-
- Map<String, List<TestFeature>> featureMap = new TreeMap<String, List<TestFeature>>();
- List<TestFeature> list = new ArrayList<RutaTestUtils.TestFeature>();
- featureMap.put(typeName, list);
- String fn = "number";
- list.add(new TestFeature(fn, "", "uima.tcas.Annotation"));
-
- CAS cas = null;
- try {
- cas = RutaTestUtils.getCAS(document, typeMap, featureMap);
- Ruta.apply(cas, script);
- } catch (Exception e) {
- e.printStackTrace();
- }
-
- Type t = null;
- AnnotationIndex<AnnotationFS> ai = null;
- FSIterator<AnnotationFS> iterator = null;
-
- t = cas.getTypeSystem().getType(typeName);
- Feature f1 = t.getFeatureByBaseName(fn);
- ai = cas.getAnnotationIndex(t);
-
- assertEquals(3, ai.size());
- iterator = ai.iterator();
- AnnotationFS next = iterator.next();
- assertEquals("More text", next.getCoveredText());
- FeatureStructure featureValue = next.getFeatureValue(f1);
- assertNotNull(featureValue);
- assertEquals("1", ((AnnotationFS) featureValue).getCoveredText());
-
- next = iterator.next();
- assertEquals("with 1", next.getCoveredText());
- featureValue = next.getFeatureValue(f1);
- assertNotNull(featureValue);
- assertEquals("1", ((AnnotationFS) featureValue).getCoveredText());
-
- next = iterator.next();
- assertEquals("and more", next.getCoveredText());
- featureValue = next.getFeatureValue(f1);
- assertNotNull(featureValue);
- assertEquals("1", ((AnnotationFS) featureValue).getCoveredText());
-
- if (cas != null) {
- cas.release();
- }
-
- }
+// @Test
+// public void testDefault() {
+// String document = "Some text. More text , with 1 , and more. even more text.";
+// String script = "PERIOD #{-> T1} PERIOD;";
+// script += " #{-> T1} PERIOD;";
+// script += "T1{CONTAINS(NUM)-> CREATE(Complex, \"number\"= NUM)};";
+// script += "Complex{-> SPLIT(COMMA)};";
+//
+// Map<String, String> typeMap = new TreeMap<String, String>();
+// String typeName = "Complex";
+// typeMap.put(typeName, "uima.tcas.Annotation");
+//
+// Map<String, List<TestFeature>> featureMap = new TreeMap<String, List<TestFeature>>();
+// List<TestFeature> list = new ArrayList<RutaTestUtils.TestFeature>();
+// featureMap.put(typeName, list);
+// String fn = "number";
+// list.add(new TestFeature(fn, "", "uima.tcas.Annotation"));
+//
+// CAS cas = null;
+// try {
+// cas = RutaTestUtils.getCAS(document, typeMap, featureMap);
+// Ruta.apply(cas, script);
+// } catch (Exception e) {
+// e.printStackTrace();
+// }
+//
+// Type t = null;
+// AnnotationIndex<AnnotationFS> ai = null;
+// FSIterator<AnnotationFS> iterator = null;
+//
+// t = cas.getTypeSystem().getType(typeName);
+// Feature f1 = t.getFeatureByBaseName(fn);
+// ai = cas.getAnnotationIndex(t);
+//
+// assertEquals(3, ai.size());
+// iterator = ai.iterator();
+// AnnotationFS next = iterator.next();
+// assertEquals("More text", next.getCoveredText());
+// FeatureStructure featureValue = next.getFeatureValue(f1);
+// assertNotNull(featureValue);
+// assertEquals("1", ((AnnotationFS) featureValue).getCoveredText());
+//
+// next = iterator.next();
+// assertEquals("with 1", next.getCoveredText());
+// featureValue = next.getFeatureValue(f1);
+// assertNotNull(featureValue);
+// assertEquals("1", ((AnnotationFS) featureValue).getCoveredText());
+//
+// next = iterator.next();
+// assertEquals("and more", next.getCoveredText());
+// featureValue = next.getFeatureValue(f1);
+// assertNotNull(featureValue);
+// assertEquals("1", ((AnnotationFS) featureValue).getCoveredText());
+//
+// if (cas != null) {
+// cas.release();
+// }
+//
+// }
+//
+// @Test
+// public void testAddBegin() {
+// String document = "Some text. More text , with 1 , and more. even more text.";
+// String script = "PERIOD #{-> T1} PERIOD;";
+// script += " #{-> T1} PERIOD;";
+// script += "T1{CONTAINS(NUM)-> CREATE(Complex, \"number\"= NUM)};";
+// script += "Complex{-> SPLIT(COMMA, true, true, false)};";
+//
+// Map<String, String> typeMap = new TreeMap<String, String>();
+// String typeName = "Complex";
+// typeMap.put(typeName, "uima.tcas.Annotation");
+//
+// Map<String, List<TestFeature>> featureMap = new TreeMap<String, List<TestFeature>>();
+// List<TestFeature> list = new ArrayList<RutaTestUtils.TestFeature>();
+// featureMap.put(typeName, list);
+// String fn = "number";
+// list.add(new TestFeature(fn, "", "uima.tcas.Annotation"));
+//
+// CAS cas = null;
+// try {
+// cas = RutaTestUtils.getCAS(document, typeMap, featureMap);
+// Ruta.apply(cas, script);
+// } catch (Exception e) {
+// e.printStackTrace();
+// }
+//
+// Type t = null;
+// AnnotationIndex<AnnotationFS> ai = null;
+// FSIterator<AnnotationFS> iterator = null;
+//
+// t = cas.getTypeSystem().getType(typeName);
+// Feature f1 = t.getFeatureByBaseName(fn);
+// ai = cas.getAnnotationIndex(t);
+//
+// assertEquals(3, ai.size());
+// iterator = ai.iterator();
+// AnnotationFS next = iterator.next();
+// assertEquals("More text", next.getCoveredText());
+// FeatureStructure featureValue = next.getFeatureValue(f1);
+// assertNotNull(featureValue);
+// assertEquals("1", ((AnnotationFS) featureValue).getCoveredText());
+//
+// next = iterator.next();
+// assertEquals(", with 1", next.getCoveredText());
+// featureValue = next.getFeatureValue(f1);
+// assertNotNull(featureValue);
+// assertEquals("1", ((AnnotationFS) featureValue).getCoveredText());
+//
+// next = iterator.next();
+// assertEquals(", and more", next.getCoveredText());
+// featureValue = next.getFeatureValue(f1);
+// assertNotNull(featureValue);
+// assertEquals("1", ((AnnotationFS) featureValue).getCoveredText());
+//
+// if (cas != null) {
+// cas.release();
+// }
+//
+// }
+//
+// @Test
+// public void testAddEnd() {
+// String document = "Some text. More text , with 1 , and more. even more text.";
+// String script = "PERIOD #{-> T1} PERIOD;";
+// script += " #{-> T1} PERIOD;";
+// script += "T1{CONTAINS(NUM)-> CREATE(Complex, \"number\"= NUM)};";
+// script += "Complex{-> SPLIT(COMMA, true, false, true)};";
+//
+// Map<String, String> typeMap = new TreeMap<String, String>();
+// String typeName = "Complex";
+// typeMap.put(typeName, "uima.tcas.Annotation");
+//
+// Map<String, List<TestFeature>> featureMap = new TreeMap<String, List<TestFeature>>();
+// List<TestFeature> list = new ArrayList<RutaTestUtils.TestFeature>();
+// featureMap.put(typeName, list);
+// String fn = "number";
+// list.add(new TestFeature(fn, "", "uima.tcas.Annotation"));
+//
+// CAS cas = null;
+// try {
+// cas = RutaTestUtils.getCAS(document, typeMap, featureMap);
+// Ruta.apply(cas, script);
+// } catch (Exception e) {
+// e.printStackTrace();
+// }
+//
+// Type t = null;
+// AnnotationIndex<AnnotationFS> ai = null;
+// FSIterator<AnnotationFS> iterator = null;
+//
+// t = cas.getTypeSystem().getType(typeName);
+// Feature f1 = t.getFeatureByBaseName(fn);
+// ai = cas.getAnnotationIndex(t);
+//
+// assertEquals(3, ai.size());
+// iterator = ai.iterator();
+// AnnotationFS next = iterator.next();
+// assertEquals("More text ,", next.getCoveredText());
+// FeatureStructure featureValue = next.getFeatureValue(f1);
+// assertNotNull(featureValue);
+// assertEquals("1", ((AnnotationFS) featureValue).getCoveredText());
+//
+// next = iterator.next();
+// assertEquals("with 1 ,", next.getCoveredText());
+// featureValue = next.getFeatureValue(f1);
+// assertNotNull(featureValue);
+// assertEquals("1", ((AnnotationFS) featureValue).getCoveredText());
+//
+// next = iterator.next();
+// assertEquals("and more", next.getCoveredText());
+// featureValue = next.getFeatureValue(f1);
+// assertNotNull(featureValue);
+// assertEquals("1", ((AnnotationFS) featureValue).getCoveredText());
+//
+// if (cas != null) {
+// cas.release();
+// }
+//
+// }
+//
+// @Test
+// public void testAddBoth() {
+// String document = "Some text. More text , with 1 , and more. even more text.";
+// String script = "PERIOD #{-> T1} PERIOD;";
+// script += " #{-> T1} PERIOD;";
+// script += "T1{CONTAINS(NUM)-> CREATE(Complex, \"number\"= NUM)};";
+// script += "Complex{-> SPLIT(COMMA, true, true, true)};";
+//
+// Map<String, String> typeMap = new TreeMap<String, String>();
+// String typeName = "Complex";
+// typeMap.put(typeName, "uima.tcas.Annotation");
+//
+// Map<String, List<TestFeature>> featureMap = new TreeMap<String, List<TestFeature>>();
+// List<TestFeature> list = new ArrayList<RutaTestUtils.TestFeature>();
+// featureMap.put(typeName, list);
+// String fn = "number";
+// list.add(new TestFeature(fn, "", "uima.tcas.Annotation"));
+//
+// CAS cas = null;
+// try {
+// cas = RutaTestUtils.getCAS(document, typeMap, featureMap);
+// Ruta.apply(cas, script);
+// } catch (Exception e) {
+// e.printStackTrace();
+// }
+//
+// Type t = null;
+// AnnotationIndex<AnnotationFS> ai = null;
+// FSIterator<AnnotationFS> iterator = null;
+//
+// t = cas.getTypeSystem().getType(typeName);
+// Feature f1 = t.getFeatureByBaseName(fn);
+// ai = cas.getAnnotationIndex(t);
+//
+// assertEquals(3, ai.size());
+// iterator = ai.iterator();
+// AnnotationFS next = iterator.next();
+// assertEquals("More text ,", next.getCoveredText());
+// FeatureStructure featureValue = next.getFeatureValue(f1);
+// assertNotNull(featureValue);
+// assertEquals("1", ((AnnotationFS) featureValue).getCoveredText());
+//
+// next = iterator.next();
+// assertEquals(", with 1 ,", next.getCoveredText());
+// featureValue = next.getFeatureValue(f1);
+// assertNotNull(featureValue);
+// assertEquals("1", ((AnnotationFS) featureValue).getCoveredText());
+//
+// next = iterator.next();
+// assertEquals(", and more", next.getCoveredText());
+// featureValue = next.getFeatureValue(f1);
+// assertNotNull(featureValue);
+// assertEquals("1", ((AnnotationFS) featureValue).getCoveredText());
+//
+// if (cas != null) {
+// cas.release();
+// }
+//
+// }
@Test
- public void testAddBegin() {
+ public void testBoundary() {
String document = "Some text. More text , with 1 , and more. even more text.";
String script = "PERIOD #{-> T1} PERIOD;";
- script += " #{-> T1} PERIOD;";
+ script += "#{-> T1} PERIOD;";
+ script += "(# COMMA){-> T2};";
+ script += "NUM (COMMA #){-> T2};";
script += "T1{CONTAINS(NUM)-> CREATE(Complex, \"number\"= NUM)};";
- script += "Complex{-> SPLIT(COMMA, true, true, false)};";
-
- Map<String, String> typeMap = new TreeMap<String, String>();
- String typeName = "Complex";
- typeMap.put(typeName, "uima.tcas.Annotation");
-
- Map<String, List<TestFeature>> featureMap = new TreeMap<String, List<TestFeature>>();
- List<TestFeature> list = new ArrayList<RutaTestUtils.TestFeature>();
- featureMap.put(typeName, list);
- String fn = "number";
- list.add(new TestFeature(fn, "", "uima.tcas.Annotation"));
-
- CAS cas = null;
- try {
- cas = RutaTestUtils.getCAS(document, typeMap, featureMap);
- Ruta.apply(cas, script);
- } catch (Exception e) {
- e.printStackTrace();
- }
-
- Type t = null;
- AnnotationIndex<AnnotationFS> ai = null;
- FSIterator<AnnotationFS> iterator = null;
-
- t = cas.getTypeSystem().getType(typeName);
- Feature f1 = t.getFeatureByBaseName(fn);
- ai = cas.getAnnotationIndex(t);
-
- assertEquals(3, ai.size());
- iterator = ai.iterator();
- AnnotationFS next = iterator.next();
- assertEquals("More text", next.getCoveredText());
- FeatureStructure featureValue = next.getFeatureValue(f1);
- assertNotNull(featureValue);
- assertEquals("1", ((AnnotationFS) featureValue).getCoveredText());
-
- next = iterator.next();
- assertEquals(", with 1", next.getCoveredText());
- featureValue = next.getFeatureValue(f1);
- assertNotNull(featureValue);
- assertEquals("1", ((AnnotationFS) featureValue).getCoveredText());
-
- next = iterator.next();
- assertEquals(", and more", next.getCoveredText());
- featureValue = next.getFeatureValue(f1);
- assertNotNull(featureValue);
- assertEquals("1", ((AnnotationFS) featureValue).getCoveredText());
-
- if (cas != null) {
- cas.release();
- }
-
- }
-
- @Test
- public void testAddEnd() {
- String document = "Some text. More text , with 1 , and more. even more text.";
- String script = "PERIOD #{-> T1} PERIOD;";
- script += " #{-> T1} PERIOD;";
- script += "T1{CONTAINS(NUM)-> CREATE(Complex, \"number\"= NUM)};";
- script += "Complex{-> SPLIT(COMMA, true, false, true)};";
+ script += "Complex{-> SPLIT(T2, false)};";
Map<String, String> typeMap = new TreeMap<String, String>();
String typeName = "Complex";
@@ -204,67 +326,7 @@ public class SplitTest {
assertEquals("1", ((AnnotationFS) featureValue).getCoveredText());
next = iterator.next();
- assertEquals("with 1 ,", next.getCoveredText());
- featureValue = next.getFeatureValue(f1);
- assertNotNull(featureValue);
- assertEquals("1", ((AnnotationFS) featureValue).getCoveredText());
-
- next = iterator.next();
- assertEquals("and more", next.getCoveredText());
- featureValue = next.getFeatureValue(f1);
- assertNotNull(featureValue);
- assertEquals("1", ((AnnotationFS) featureValue).getCoveredText());
-
- if (cas != null) {
- cas.release();
- }
-
- }
-
- @Test
- public void testAddBoth() {
- String document = "Some text. More text , with 1 , and more. even more text.";
- String script = "PERIOD #{-> T1} PERIOD;";
- script += " #{-> T1} PERIOD;";
- script += "T1{CONTAINS(NUM)-> CREATE(Complex, \"number\"= NUM)};";
- script += "Complex{-> SPLIT(COMMA, true, true, true)};";
-
- Map<String, String> typeMap = new TreeMap<String, String>();
- String typeName = "Complex";
- typeMap.put(typeName, "uima.tcas.Annotation");
-
- Map<String, List<TestFeature>> featureMap = new TreeMap<String, List<TestFeature>>();
- List<TestFeature> list = new ArrayList<RutaTestUtils.TestFeature>();
- featureMap.put(typeName, list);
- String fn = "number";
- list.add(new TestFeature(fn, "", "uima.tcas.Annotation"));
-
- CAS cas = null;
- try {
- cas = RutaTestUtils.getCAS(document, typeMap, featureMap);
- Ruta.apply(cas, script);
- } catch (Exception e) {
- e.printStackTrace();
- }
-
- Type t = null;
- AnnotationIndex<AnnotationFS> ai = null;
- FSIterator<AnnotationFS> iterator = null;
-
- t = cas.getTypeSystem().getType(typeName);
- Feature f1 = t.getFeatureByBaseName(fn);
- ai = cas.getAnnotationIndex(t);
-
- assertEquals(3, ai.size());
- iterator = ai.iterator();
- AnnotationFS next = iterator.next();
- assertEquals("More text ,", next.getCoveredText());
- FeatureStructure featureValue = next.getFeatureValue(f1);
- assertNotNull(featureValue);
- assertEquals("1", ((AnnotationFS) featureValue).getCoveredText());
-
- next = iterator.next();
- assertEquals(", with 1 ,", next.getCoveredText());
+ assertEquals("with 1", next.getCoveredText());
featureValue = next.getFeatureValue(f1);
assertNotNull(featureValue);
assertEquals("1", ((AnnotationFS) featureValue).getCoveredText());