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Posted to commits@systemds.apache.org by ba...@apache.org on 2021/03/25 11:14:04 UTC
[systemds] branch master updated (e8dcd3d -> 3ec800a)
This is an automated email from the ASF dual-hosted git repository.
baunsgaard pushed a change to branch master
in repository https://gitbox.apache.org/repos/asf/systemds.git.
from e8dcd3d [SYSTEMDS-2911] Asynchronous accrue gradients for paramserv epoch sync
new d3eb195 [MINOR] Update code formatter
new 8ba9016 [MINOR] Fix native warning on sparse MM
new 3ec800a [SYSTEMDS-2912] AggregateFinalResults avoid Generic correction
The 3 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "add" were already present in the repository and have only
been added to this reference.
Summary of changes:
dev/CodeStyle_eclipse.xml | 736 +++++++++++----------
.../sysds/runtime/matrix/data/LibMatrixAgg.java | 12 +-
.../sysds/runtime/matrix/data/LibMatrixNative.java | 20 +-
.../sysds/runtime/matrix/data/MatrixValue.java | 15 +
4 files changed, 426 insertions(+), 357 deletions(-)
[systemds] 02/03: [MINOR] Fix native warning on sparse MM
Posted by ba...@apache.org.
This is an automated email from the ASF dual-hosted git repository.
baunsgaard pushed a commit to branch master
in repository https://gitbox.apache.org/repos/asf/systemds.git
commit 8ba9016dcc5aee402861617f94b069cbc7992257
Author: baunsgaard <ba...@tugraz.at>
AuthorDate: Wed Mar 24 19:55:01 2021 +0100
[MINOR] Fix native warning on sparse MM
---
.../sysds/runtime/matrix/data/LibMatrixNative.java | 20 ++++++++++++--------
1 file changed, 12 insertions(+), 8 deletions(-)
diff --git a/src/main/java/org/apache/sysds/runtime/matrix/data/LibMatrixNative.java b/src/main/java/org/apache/sysds/runtime/matrix/data/LibMatrixNative.java
index ce7fbba..f6f24c4 100644
--- a/src/main/java/org/apache/sysds/runtime/matrix/data/LibMatrixNative.java
+++ b/src/main/java/org/apache/sysds/runtime/matrix/data/LibMatrixNative.java
@@ -79,11 +79,12 @@ public class LibMatrixNative
return;
}
- if( NativeHelper.isNativeLibraryLoaded()
- && !isMatMultMemoryBound(m1.rlen, m1.clen, m2.clen)
+ boolean isValidForNative = !isMatMultMemoryBound(m1.rlen, m1.clen, m2.clen)
&& !m1.isInSparseFormat() && !m2.isInSparseFormat()
- && m1.getDenseBlock().isContiguous() && m2.getDenseBlock().isContiguous()
- && 8L * ret.getLength() < Integer.MAX_VALUE ) //contiguous but not allocated
+ && m1.getDenseBlock().isContiguous() && m2.getDenseBlock().isContiguous() //contiguous but not allocated
+ && 8L * ret.getLength() < Integer.MAX_VALUE;
+
+ if( NativeHelper.isNativeLibraryLoaded() && isValidForNative )
{
ret.sparse = false;
ret.allocateDenseBlock();
@@ -114,11 +115,14 @@ public class LibMatrixNative
}
//else record failure and fallback to java
Statistics.incrementNativeFailuresCounter();
+ LOG.warn("matrixMult: Native mat mult failed. Falling back to java version ("
+ + "loaded=" + NativeHelper.isNativeLibraryLoaded()
+ + ", sparse=" + (m1.isInSparseFormat() | m2.isInSparseFormat()) + ")");
}
- //fallback to default java implementation
- LOG.warn("matrixMult: Native mat mult failed. Falling back to java version ("
- + "loaded=" + NativeHelper.isNativeLibraryLoaded()
- + ", sparse=" + (m1.isInSparseFormat() | m2.isInSparseFormat()) + ")");
+
+ if(isValidForNative)
+ LOG.debug("Was valid for native MM but native lib was not loaded");
+
if (k == 1)
LibMatrixMult.matrixMult(m1, m2, ret, !examSparsity);
else
[systemds] 01/03: [MINOR] Update code formatter
Posted by ba...@apache.org.
This is an automated email from the ASF dual-hosted git repository.
baunsgaard pushed a commit to branch master
in repository https://gitbox.apache.org/repos/asf/systemds.git
commit d3eb19566d4722d0b322baf1b3d7df2b47cabf82
Author: baunsgaard <ba...@tugraz.at>
AuthorDate: Wed Mar 24 18:52:36 2021 +0100
[MINOR] Update code formatter
This commit update the code formatter settings to the latest 21 version.
And change the settings to not insert many newlines in function calls if
the parameters make the line exceed the 120 characters.
Closes #1210
---
dev/CodeStyle_eclipse.xml | 736 ++++++++++++++++++++++++----------------------
1 file changed, 389 insertions(+), 347 deletions(-)
diff --git a/dev/CodeStyle_eclipse.xml b/dev/CodeStyle_eclipse.xml
index 63255cb..a5595a9 100644
--- a/dev/CodeStyle_eclipse.xml
+++ b/dev/CodeStyle_eclipse.xml
@@ -16,351 +16,393 @@
* KIND, either express or implied. See the License for the
* specific language governing permissions and limitations
* under the License.
--->
-<profiles version="16">
-<profile kind="CodeFormatterProfile" name="SystemDS" version="16">
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_ellipsis" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_comma_in_enum_declarations" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_comma_in_allocation_expression" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_at_in_annotation_type_declaration" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.parentheses_positions_in_for_statment" value="common_lines"/>
-<setting id="org.eclipse.jdt.core.formatter.comment.new_lines_at_block_boundaries" value="true"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_logical_operator" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_comma_in_constructor_declaration_parameters" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.comment.insert_new_line_for_parameter" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_new_line_after_annotation_on_package" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.parentheses_positions_in_method_invocation" value="common_lines"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_between_empty_parens_in_enum_constant" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.blank_lines_after_imports" value="1"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_closing_paren_in_while" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.comment.insert_new_line_before_root_tags" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_between_empty_parens_in_annotation_type_member_declaration" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_comma_in_method_declaration_throws" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.parentheses_positions_in_switch_statement" value="common_lines"/>
-<setting id="org.eclipse.jdt.core.formatter.comment.format_javadoc_comments" value="true"/>
-<setting id="org.eclipse.jdt.core.formatter.indentation.size" value="4"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_postfix_operator" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.parentheses_positions_in_enum_constant_declaration" value="common_lines"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_comma_in_for_increments" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_comma_in_type_arguments" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_comma_in_for_inits" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_semicolon_in_for" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.align_with_spaces" value="false"/>
-<setting id="org.eclipse.jdt.core.formatter.disabling_tag" value="@formatter:off"/>
-<setting id="org.eclipse.jdt.core.formatter.continuation_indentation" value="1"/>
-<setting id="org.eclipse.jdt.core.formatter.alignment_for_enum_constants" value="16"/>
-<setting id="org.eclipse.jdt.core.formatter.blank_lines_before_imports" value="1"/>
-<setting id="org.eclipse.jdt.core.formatter.blank_lines_after_package" value="1"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_comma_in_multiple_local_declarations" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.parentheses_positions_in_if_while_statement" value="common_lines"/>
-<setting id="org.eclipse.jdt.core.formatter.alignment_for_arguments_in_enum_constant" value="16"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_opening_angle_bracket_in_parameterized_type_reference" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.comment.indent_root_tags" value="false"/>
-<setting id="org.eclipse.jdt.core.formatter.wrap_before_or_operator_multicatch" value="true"/>
-<setting id="org.eclipse.jdt.core.formatter.enabling_tag" value="@formatter:on"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_closing_brace_in_block" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.comment.count_line_length_from_starting_position" value="true"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_parenthesized_expression_in_return" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.alignment_for_throws_clause_in_method_declaration" value="16"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_new_line_after_annotation_on_parameter" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.wrap_before_multiplicative_operator" value="false"/>
-<setting id="org.eclipse.jdt.core.formatter.keep_then_statement_on_same_line" value="false"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_new_line_after_annotation_on_field" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_comma_in_explicitconstructorcall_arguments" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_prefix_operator" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.blank_lines_between_type_declarations" value="1"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_closing_brace_in_array_initializer" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_closing_paren_in_for" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_opening_paren_in_catch" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_opening_angle_bracket_in_type_arguments" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_new_line_after_annotation_on_method" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_opening_paren_in_switch" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.alignment_for_parameterized_type_references" value="0"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_opening_brace_in_anonymous_type_declaration" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.alignment_for_logical_operator" value="16"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_closing_paren_in_parenthesized_expression" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.keep_annotation_declaration_on_one_line" value="one_line_never"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_new_line_after_annotation_on_enum_constant" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_multiplicative_operator" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.never_indent_line_comments_on_first_column" value="false"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_and_in_type_parameter" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_comma_in_for_inits" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.indent_statements_compare_to_block" value="true"/>
-<setting id="org.eclipse.jdt.core.formatter.brace_position_for_anonymous_type_declaration" value="end_of_line"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_question_in_wildcard" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_annotation" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_comma_in_method_invocation_arguments" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_opening_brace_in_switch" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.comment.align_tags_descriptions_grouped" value="true"/>
-<setting id="org.eclipse.jdt.core.formatter.comment.line_length" value="120"/>
-<setting id="org.eclipse.jdt.core.formatter.use_on_off_tags" value="false"/>
-<setting id="org.eclipse.jdt.core.formatter.keep_method_body_on_one_line" value="one_line_never"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_between_empty_brackets_in_array_allocation_expression" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.keep_loop_body_block_on_one_line" value="one_line_never"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_opening_brace_in_enum_constant" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_between_empty_parens_in_method_invocation" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_assignment_operator" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_opening_brace_in_type_declaration" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_opening_paren_in_for" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.comment.preserve_white_space_between_code_and_line_comments" value="false"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_new_line_after_annotation_on_local_variable" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.brace_position_for_method_declaration" value="end_of_line"/>
-<setting id="org.eclipse.jdt.core.formatter.keep_enum_constant_declaration_on_one_line" value="one_line_never"/>
-<setting id="org.eclipse.jdt.core.formatter.align_variable_declarations_on_columns" value="false"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_closing_paren_in_method_invocation" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.alignment_for_union_type_in_multicatch" value="16"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_colon_in_for" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.keep_type_declaration_on_one_line" value="one_line_never"/>
-<setting id="org.eclipse.jdt.core.formatter.number_of_blank_lines_at_beginning_of_method_body" value="0"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_closing_angle_bracket_in_type_arguments" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.keep_else_statement_on_same_line" value="false"/>
-<setting id="org.eclipse.jdt.core.formatter.parentheses_positions_in_catch_clause" value="common_lines"/>
-<setting id="org.eclipse.jdt.core.formatter.alignment_for_additive_operator" value="16"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_comma_in_parameterized_type_reference" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_comma_in_array_initializer" value="do not insert"/>
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-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_comma_in_annotation" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.alignment_for_arguments_in_explicit_constructor_call" value="16"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_relational_operator" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.alignment_for_multiplicative_operator" value="16"/>
-<setting id="org.eclipse.jdt.core.formatter.keep_anonymous_type_declaration_on_one_line" value="one_line_never"/>
-<setting id="org.eclipse.jdt.core.formatter.wrap_before_shift_operator" value="true"/>
-<setting id="org.eclipse.jdt.core.formatter.indent_body_declarations_compare_to_annotation_declaration_header" value="true"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_comma_in_superinterfaces" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_colon_in_default" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_question_in_conditional" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.brace_position_for_block" value="end_of_line"/>
-<setting id="org.eclipse.jdt.core.formatter.brace_position_for_constructor_declaration" value="end_of_line"/>
-<setting id="org.eclipse.jdt.core.formatter.brace_position_for_lambda_body" value="end_of_line"/>
-<setting id="org.eclipse.jdt.core.formatter.compact_else_if" value="true"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_comma_in_type_parameters" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_catch" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_method_invocation" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_bitwise_operator" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.put_empty_statement_on_new_line" value="true"/>
-<setting id="org.eclipse.jdt.core.formatter.alignment_for_parameters_in_constructor_declaration" value="16"/>
-<setting id="org.eclipse.jdt.core.formatter.alignment_for_type_parameters" value="0"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_comma_in_method_invocation_arguments" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.alignment_for_arguments_in_method_invocation" value="80"/>
-<setting id="org.eclipse.jdt.core.formatter.alignment_for_throws_clause_in_constructor_declaration" value="16"/>
-<setting id="org.eclipse.jdt.core.formatter.alignment_for_compact_loops" value="16"/>
-<setting id="org.eclipse.jdt.core.formatter.comment.clear_blank_lines_in_block_comment" value="false"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_new_line_before_catch_in_try_statement" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_try" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.keep_simple_for_body_on_same_line" value="false"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_new_line_at_end_of_file_if_missing" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.comment.clear_blank_lines_in_javadoc_comment" value="false"/>
-<setting id="org.eclipse.jdt.core.formatter.alignment_for_relational_operator" value="0"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_comma_in_array_initializer" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_unary_operator" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.alignment_for_expressions_in_array_initializer" value="16"/>
-<setting id="org.eclipse.jdt.core.formatter.format_line_comment_starting_on_first_column" value="true"/>
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-<setting id="org.eclipse.jdt.core.formatter.parentheses_positions_in_annotation" value="common_lines"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_colon_in_case" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_ellipsis" value="do not insert"/>
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-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_colon_in_assert" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_closing_paren_in_if" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_comma_in_type_arguments" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_and_in_type_parameter" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_string_concatenation" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_opening_paren_in_parenthesized_expression" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.comment.format_line_comments" value="true"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_colon_in_labeled_statement" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.align_type_members_on_columns" value="false"/>
-<setting id="org.eclipse.jdt.core.formatter.alignment_for_assignment" value="0"/>
-<setting id="org.eclipse.jdt.core.formatter.alignment_for_module_statements" value="16"/>
-<setting id="org.eclipse.jdt.core.formatter.indent_body_declarations_compare_to_type_header" value="true"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_between_empty_parens_in_method_declaration" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.comment.align_tags_names_descriptions" value="false"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_opening_paren_in_enum_constant" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.alignment_for_superinterfaces_in_type_declaration" value="16"/>
-<setting id="org.eclipse.jdt.core.formatter.keep_if_then_body_block_on_one_line" value="one_line_never"/>
-<setting id="org.eclipse.jdt.core.formatter.blank_lines_before_first_class_body_declaration" value="0"/>
-<setting id="org.eclipse.jdt.core.formatter.alignment_for_conditional_expression" value="0"/>
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-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_comma_in_constructor_declaration_parameters" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.format_guardian_clause_on_one_line" value="false"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_if" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.align_assignment_statements_on_columns" value="false"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_new_line_after_annotation_on_type" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_opening_brace_in_block" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.brace_position_for_enum_declaration" value="end_of_line"/>
-<setting id="org.eclipse.jdt.core.formatter.brace_position_for_block_in_case" value="end_of_line"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_closing_paren_in_constructor_declaration" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.alignment_for_conditional_expression_chain" value="0"/>
-<setting id="org.eclipse.jdt.core.formatter.comment.format_header" value="false"/>
-<setting id="org.eclipse.jdt.core.formatter.alignment_for_arguments_in_allocation_expression" value="16"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_additive_operator" value="insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_after_opening_paren_in_method_invocation" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_while" value="do not insert"/>
-<setting id="org.eclipse.jdt.core.formatter.insert_space_before_closing_paren_in_switch" value="do not insert"/>
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+-->
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+ </profile>
</profiles>
[systemds] 03/03: [SYSTEMDS-2912] AggregateFinalResults avoid
Generic correction
Posted by ba...@apache.org.
This is an automated email from the ASF dual-hosted git repository.
baunsgaard pushed a commit to branch master
in repository https://gitbox.apache.org/repos/asf/systemds.git
commit 3ec800ab7549dabb973c5d1d79fca88944cdf3ff
Author: baunsgaard <ba...@tugraz.at>
AuthorDate: Wed Mar 24 20:29:31 2021 +0100
[SYSTEMDS-2912] AggregateFinalResults avoid Generic correction
Aggregate of final results would use a generic aggregation if
either inputs were different format from each other.
This commit change the behavior to force uniform format.
Furthermore allocating the initial result in dense improve performance
slightly more with 1 second
The change improve performance of:
uack+ 59.179sec -> uack+ 9.0sec
on CNN implementation on MNIST using the parameterserver
Closes #1211
---
.../apache/sysds/runtime/matrix/data/LibMatrixAgg.java | 12 ++++++++++--
.../org/apache/sysds/runtime/matrix/data/MatrixValue.java | 15 +++++++++++++++
2 files changed, 25 insertions(+), 2 deletions(-)
diff --git a/src/main/java/org/apache/sysds/runtime/matrix/data/LibMatrixAgg.java b/src/main/java/org/apache/sysds/runtime/matrix/data/LibMatrixAgg.java
index 743dce9..86bd412 100644
--- a/src/main/java/org/apache/sysds/runtime/matrix/data/LibMatrixAgg.java
+++ b/src/main/java/org/apache/sysds/runtime/matrix/data/LibMatrixAgg.java
@@ -274,7 +274,7 @@ public class LibMatrixAgg
pool.shutdown();
//aggregate partial results
if( !(uaop.indexFn instanceof ReduceCol) ) {
- out.copy(((PartialAggTask)tasks.get(0)).getResult()); //for init
+ out.copy(((PartialAggTask)tasks.get(0)).getResult(), false); //for init
for( int i=1; i<tasks.size(); i++ )
aggregateFinalResult(uaop.aggOp, out, ((PartialAggTask)tasks.get(i)).getResult());
}
@@ -468,7 +468,7 @@ public class LibMatrixAgg
List<Future<MatrixBlock>> rtasks = pool.invokeAll(tasks);
pool.shutdown();
//aggregate partial results and error handling
- ret.copy(rtasks.get(0).get()); //for init
+ ret.copy(rtasks.get(0).get(), false); //for init
for( int i=1; i<rtasks.size(); i++ )
aggregateFinalResult(op.aggOp, ret, rtasks.get(i).get());
}
@@ -674,6 +674,14 @@ public class LibMatrixAgg
laop = new AggregateOperator(0, KahanPlus.getKahanPlusFnObject(), aop.correction);
}
+ if( out.isInSparseFormat() != partout.isInSparseFormat() ){
+ if(partout.isInSparseFormat())
+ partout.sparseToDense();
+
+ if(out.isInSparseFormat())
+ out.sparseToDense();
+ }
+
//incremental aggregation of final results
if( laop.existsCorrection() )
out.incrementalAggregate(laop, partout);
diff --git a/src/main/java/org/apache/sysds/runtime/matrix/data/MatrixValue.java b/src/main/java/org/apache/sysds/runtime/matrix/data/MatrixValue.java
index d90e844..c9838d5 100644
--- a/src/main/java/org/apache/sysds/runtime/matrix/data/MatrixValue.java
+++ b/src/main/java/org/apache/sysds/runtime/matrix/data/MatrixValue.java
@@ -96,7 +96,22 @@ public abstract class MatrixValue implements WritableComparable
public abstract void reset(int rl, int cl, boolean sp, long nnzs);
public abstract void reset(int rl, int cl, double v);
+ /**
+ * Copy this MatrixValue into that MatrixValue.
+ *
+ * If the MatrixValue is a MatrixBlock evaluate the sparsity of the original matrix,
+ * and copy into either a sparse or a dense matrix.
+ *
+ * @param that object to copy the values into.
+ */
public abstract void copy(MatrixValue that);
+
+ /**
+ * Copy this MatrixValue into that MatrixValue. But select sparse destination block depending on boolean parameter.
+ *
+ * @param that object to copy the values into.
+ * @param sp boolean specifying if output should be forced sparse or dense. (only applicable if the 'that' is a MatrixBlock)
+ */
public abstract void copy(MatrixValue that, boolean sp);
public abstract MatrixValue scalarOperations(ScalarOperator op, MatrixValue result);