You are viewing a plain text version of this content. The canonical link for it is here.
Posted to commits@taverna.apache.org by st...@apache.org on 2015/03/17 10:55:45 UTC

[2/6] incubator-taverna-language git commit: Katy Wolstencroft's workflows from Taverna tutorial

Katy Wolstencroft's workflows from Taverna tutorial


Project: http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/repo
Commit: http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/commit/fab2c350
Tree: http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/tree/fab2c350
Diff: http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/diff/fab2c350

Branch: refs/heads/master
Commit: fab2c350260675a2ed8503c51b249d33e4a804b7
Parents: 315acb4
Author: Stian Soiland-Reyes <st...@apache.org>
Authored: Tue Mar 17 09:49:39 2015 +0000
Committer: Stian Soiland-Reyes <st...@apache.org>
Committed: Tue Mar 17 09:50:21 2015 +0000

----------------------------------------------------------------------
 .../src/test/resources/fasta_and_pscan.t2flow   | 21 +++++++++++++++++++-
 .../resources/fasta_pscan_and_dbfetch.t2flow    | 21 +++++++++++++++++++-
 2 files changed, 40 insertions(+), 2 deletions(-)
----------------------------------------------------------------------


http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/blob/fab2c350/taverna-scufl2-t2flow/src/test/resources/fasta_and_pscan.t2flow
----------------------------------------------------------------------
diff --git a/taverna-scufl2-t2flow/src/test/resources/fasta_and_pscan.t2flow b/taverna-scufl2-t2flow/src/test/resources/fasta_and_pscan.t2flow
index 0dfcacb..5aab1d0 100644
--- a/taverna-scufl2-t2flow/src/test/resources/fasta_and_pscan.t2flow
+++ b/taverna-scufl2-t2flow/src/test/resources/fasta_and_pscan.t2flow
@@ -1,3 +1,22 @@
+<?xml version="1.0"?>
+<!-- 
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ -->
 <workflow xmlns="http://taverna.sf.net/2008/xml/t2flow" version="1" producedBy="taverna-2.4.0"><dataflow id="a5b440ec-9bc1-4dc6-98b1-6c41fa17a21a" role="top"><name>Workflow1</name><inputPorts><port><name>ID</name><depth>0</depth><granularDepth>0</granularDepth><annotations><annotation_chain encoding="xstream"><net.sf.taverna.t2.annotation.AnnotationChainImpl xmlns="">
   <annotationAssertions>
     <net.sf.taverna.t2.annotation.AnnotationAssertionImpl>
@@ -98,4 +117,4 @@ outputText = writer.toString();
       <curationEventList />
     </net.sf.taverna.t2.annotation.AnnotationAssertionImpl>
   </annotationAssertions>
-</net.sf.taverna.t2.annotation.AnnotationChainImpl></annotation_chain_2_2></annotations></dataflow></workflow>
\ No newline at end of file
+</net.sf.taverna.t2.annotation.AnnotationChainImpl></annotation_chain_2_2></annotations></dataflow></workflow>

http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/blob/fab2c350/taverna-scufl2-t2flow/src/test/resources/fasta_pscan_and_dbfetch.t2flow
----------------------------------------------------------------------
diff --git a/taverna-scufl2-t2flow/src/test/resources/fasta_pscan_and_dbfetch.t2flow b/taverna-scufl2-t2flow/src/test/resources/fasta_pscan_and_dbfetch.t2flow
index 83f1404..02cd245 100644
--- a/taverna-scufl2-t2flow/src/test/resources/fasta_pscan_and_dbfetch.t2flow
+++ b/taverna-scufl2-t2flow/src/test/resources/fasta_pscan_and_dbfetch.t2flow
@@ -1,3 +1,22 @@
+<?xml version="1.0"?>
+<!-- 
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ -->
 <workflow xmlns="http://taverna.sf.net/2008/xml/t2flow" version="1" producedBy="taverna-2.4.0"><dataflow id="1c78b8e1-9700-43a5-9452-20a77aecfe46" role="top"><name>Workflow1</name><inputPorts><port><name>ID</name><depth>0</depth><granularDepth>0</granularDepth><annotations><annotation_chain encoding="xstream"><net.sf.taverna.t2.annotation.AnnotationChainImpl xmlns="">
   <annotationAssertions>
     <net.sf.taverna.t2.annotation.AnnotationAssertionImpl>
@@ -147,4 +166,4 @@ outputText = writer.toString();
       <curationEventList />
     </net.sf.taverna.t2.annotation.AnnotationAssertionImpl>
   </annotationAssertions>
-</net.sf.taverna.t2.annotation.AnnotationChainImpl></annotation_chain_2_2></annotations></dataflow></workflow>
\ No newline at end of file
+</net.sf.taverna.t2.annotation.AnnotationChainImpl></annotation_chain_2_2></annotations></dataflow></workflow>